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The map label for this gene is yqeB [H]

Identifier: 126699165

GI number: 126699165

Start: 1808813

End: 1809634

Strand: Direct

Name: yqeB [H]

Synonym: CD1561

Alternate gene names: 126699165

Gene position: 1808813-1809634 (Clockwise)

Preceding gene: 126699164

Following gene: 126699166

Centisome position: 42.16

GC content: 29.81

Gene sequence:

>822_bases
ATGAATATATATGAACAAGCAATAAGATTAATAGAAAATAATGAGGATTTCGCATTTGCTACAATAACGTCTCATTCAGG
TTCAACACCACGTGAAACTGGAGCAATGATGATTGTGAAAAATGATTCTACTATATTTGGCTCAGTAGGAGGAGGTAGTG
TAGAAGCAGAATGTATAAAACATGCAATTAATGTTATAAAAAACAGAGAATCAATGTTGTATAAATTTACTCTAAACAAA
TCTGATGTTGCAAAACTAGGAATGATATGTGGAGGTACTGGAGAAATACAAATAGATTTTATAGATAGTAAATTAAAAAG
TAATATAGAAAAATTTAATAAGAGACTAAAGGAAAATACAAGTAAAGCATATATATTTGGTGCAGGTCATATTTCAAGAG
ATGTTGCTGTGATACTATCTCTTTTAGAATTTAGAACAGTAGTAATAGATGATAGAGAAGAATTTGCTAATCATGAAAGG
TTTCCAGAATCAGAAGTAGTAGTTTTAGATTCTTTTGAAAACATACCAGATTTTCCAACTGACGAAAATAGTTATATAAT
TATTTTAACAAGAGGTCATCTATATGATTCAAGTGCTTTAGAATGGGCTCTTAAAAGAGAGGCTGGTTATATAGGTATGA
TTGGAAGTAGAACAAAAATTGGATTGACTTACGAAAAACTCATGAAAAAAGGTTTTAAGAAGGAAGAATTATCAAAAGTA
CATGCACCAATAGGCATAAAATTGAATGCTCAAACACCAGCTGAAATAGCTGTATGTATAGCTGCTGAACTTATAAATTG
TAGAGCTAATAAGGAAAAATAA

Upstream 100 bases:

>100_bases
GTTATATGGGAGCAGTAGAATTTGTGATACCAAATAAAGTAATAAAAAGACTAAGATAGATATATAGAAGATTTTTAGAT
AGACTGGTAAGGAGAGTTAT

Downstream 100 bases:

>100_bases
ACTAATGAACACAGGGAGTAAAGATATTGATACTTTAAAGGTTAATTTTAGAGGGATTGAAATAAAAGCAGTTTTAGTAT
ATAAAAATAGAAAAAATATT

Product: dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MNIYEQAIRLIENNEDFAFATITSHSGSTPRETGAMMIVKNDSTIFGSVGGGSVEAECIKHAINVIKNRESMLYKFTLNK
SDVAKLGMICGGTGEIQIDFIDSKLKSNIEKFNKRLKENTSKAYIFGAGHISRDVAVILSLLEFRTVVIDDREEFANHER
FPESEVVVLDSFENIPDFPTDENSYIIILTRGHLYDSSALEWALKREAGYIGMIGSRTKIGLTYEKLMKKGFKKEELSKV
HAPIGIKLNAQTPAEIAVCIAAELINCRANKEK

Sequences:

>Translated_273_residues
MNIYEQAIRLIENNEDFAFATITSHSGSTPRETGAMMIVKNDSTIFGSVGGGSVEAECIKHAINVIKNRESMLYKFTLNK
SDVAKLGMICGGTGEIQIDFIDSKLKSNIEKFNKRLKENTSKAYIFGAGHISRDVAVILSLLEFRTVVIDDREEFANHER
FPESEVVVLDSFENIPDFPTDENSYIIILTRGHLYDSSALEWALKREAGYIGMIGSRTKIGLTYEKLMKKGFKKEELSKV
HAPIGIKLNAQTPAEIAVCIAAELINCRANKEK
>Mature_273_residues
MNIYEQAIRLIENNEDFAFATITSHSGSTPRETGAMMIVKNDSTIFGSVGGGSVEAECIKHAINVIKNRESMLYKFTLNK
SDVAKLGMICGGTGEIQIDFIDSKLKSNIEKFNKRLKENTSKAYIFGAGHISRDVAVILSLLEFRTVVIDDREEFANHER
FPESEVVVLDSFENIPDFPTDENSYIIILTRGHLYDSSALEWALKREAGYIGMIGSRTKIGLTYEKLMKKGFKKEELSKV
HAPIGIKLNAQTPAEIAVCIAAELINCRANKEK

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789240, Length=272, Percent_Identity=30.5147058823529, Blast_Score=138, Evalue=4e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR017695
- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 30433; Mature: 30433

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIYEQAIRLIENNEDFAFATITSHSGSTPRETGAMMIVKNDSTIFGSVGGGSVEAECIK
CCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCEEEECCCCCCCHHHHHH
HAINVIKNRESMLYKFTLNKSDVAKLGMICGGTGEIQIDFIDSKLKSNIEKFNKRLKENT
HHHHHHHCCCCEEEEEECCHHHHHHHHEEECCCCEEEEEEECHHHHHHHHHHHHHHHCCC
SKAYIFGAGHISRDVAVILSLLEFRTVVIDDREEFANHERFPESEVVVLDSFENIPDFPT
CEEEEEECCCCHHHHHHHHHHHHHHEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCCC
DENSYIIILTRGHLYDSSALEWALKREAGYIGMIGSRTKIGLTYEKLMKKGFKKEELSKV
CCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCEEECCCHHHHHHCCCCHHHHHHH
HAPIGIKLNAQTPAEIAVCIAAELINCRANKEK
CCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNIYEQAIRLIENNEDFAFATITSHSGSTPRETGAMMIVKNDSTIFGSVGGGSVEAECIK
CCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCEEEECCCCCCCHHHHHH
HAINVIKNRESMLYKFTLNKSDVAKLGMICGGTGEIQIDFIDSKLKSNIEKFNKRLKENT
HHHHHHHCCCCEEEEEECCHHHHHHHHEEECCCCEEEEEEECHHHHHHHHHHHHHHHCCC
SKAYIFGAGHISRDVAVILSLLEFRTVVIDDREEFANHERFPESEVVVLDSFENIPDFPT
CEEEEEECCCCHHHHHHHHHHHHHHEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCCC
DENSYIIILTRGHLYDSSALEWALKREAGYIGMIGSRTKIGLTYEKLMKKGFKKEELSKV
CCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCEEECCCHHHHHHCCCCHHHHHHH
HAPIGIKLNAQTPAEIAVCIAAELINCRANKEK
CCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]