| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699039
Identifier: 126699039
GI number: 126699039
Start: 1665326
End: 1666717
Strand: Direct
Name: 126699039
Synonym: CD1435
Alternate gene names: NA
Gene position: 1665326-1666717 (Clockwise)
Preceding gene: 126699038
Following gene: 126699040
Centisome position: 38.82
GC content: 25.07
Gene sequence:
>1392_bases ATGAATTTTAGAGATTTATTTGAGAAGGCTGTAGATTTTATTGATGAAAAAAGGAAATCTATAGTTGCGATTTCATTATC AACATTAGGTGTAATTGCTTTGATAATAGTATTTTTCTTAAGTAGTAACGAGTTTAGTGTAGGAAATGAAGCTAATGAGT TGTTAAAGATTATAGAGAAAAGACAGTATTCTATAGCTGTTGATTACTACACAAGTATAGAAAAAAAGTTTTCTGATTCA AAAATGGAAAGGTTTAATAAGTCTGTTTCTAAAAAAATAAATAAATTGCTATTAAATAGTGGTGATAAATATTTAGATGG AGACATAAGTCAAGAAAGTTTTATTGGATTAATAAATACCGTGAAAGAATTAAACAAAATAAGTATAGATGTGGATGACT TATTAGCTCAAGCTGATAGAGTTAGAGAAATGTATAAAGAAGAAAATACTACTTATGATATTGCCATTAACTACATAAGT ACTGTTTCAATATTAAATGGTATGGGTAGTAATCTAGATGTATACAAACAGAATATAGAAACAATCAAAGAGTCTAGAGA TGTTTATGACTCAGCAGTAAAAGACCAAAAAGCATATAAGTATTATGAAGCTATTGAAAAGTATAATAAAGTATTAAAAG AAGATGAAAAGTATTACAGTATGGCTCAAAATGGGAAAGAACAATGTATTGAAGAAATGTATGATTACTATATAAGTAGA GCTGAAGAGGCAAATAATTCTGGAGATTATGAAAGAGCATTACAATATATTGAGTATTTAAAAGACGATTATTCAGATGA TGAAAAGGTACAGAGTTTAGAAAAAAAATATAAAAAGAATTTATCATTGTATACTTTAACATCTGATGACATTATAAATG TAATAGCTAAAAAAAGTGGCAAAGACAAGGCAAATCTATCTATAAATTCACTTCCACAAATGATAAAAAATAATAAATAC TATTATGCTGAAGTATATGAGTATGATAAATTAATAAATGAAGTTTTGGTAAGTGCAAAAACTAAAGATTTATATTCATA TAAAGATGGTAAAAAAGATTACAAAGTAGATTATGGTGATGGATACTTTAGAATATTAGAAGATGGAAGTTATCAATTTG GTATTACAAAAGATAAAGCTAAGTTTGTGTTAACTAATACTCTTGATGAAAAAGAAAATAAGTATAAAAAGATTGAGATA TTAGATATAGAGAAAGCAGATAGATATGTAAAAAGTAAAAAGAGTTTAGAAGAATTGTTTGGAAAATATAAAAATATTTA TTATTATGCTGTAGTAAATAAAGGCTTATTTAGAGGCAAAGAAGTTTATGCTATTAATATTTACAATGAAAAAATATATG CCATATCAGAAAATGGACTAAATGAATATTAA
Upstream 100 bases:
>100_bases CTTGTGTTTTTATTTTTTTTCAAGAATTATGATATAATAACCAATAAGAAATTTAGTTTACCATAAAATATAAAGATTAT TAAATGGAGAGGGAACTATA
Downstream 100 bases:
>100_bases TAATATTAAATTAATATATAATTAAAAAGTTTTTGGGGTTTTAAGGCGCATTATGTAGTAATATAATAATAGGGATATAT AAATAATTTTATTGTAAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 463; Mature: 463
Protein sequence:
>463_residues MNFRDLFEKAVDFIDEKRKSIVAISLSTLGVIALIIVFFLSSNEFSVGNEANELLKIIEKRQYSIAVDYYTSIEKKFSDS KMERFNKSVSKKINKLLLNSGDKYLDGDISQESFIGLINTVKELNKISIDVDDLLAQADRVREMYKEENTTYDIAINYIS TVSILNGMGSNLDVYKQNIETIKESRDVYDSAVKDQKAYKYYEAIEKYNKVLKEDEKYYSMAQNGKEQCIEEMYDYYISR AEEANNSGDYERALQYIEYLKDDYSDDEKVQSLEKKYKKNLSLYTLTSDDIINVIAKKSGKDKANLSINSLPQMIKNNKY YYAEVYEYDKLINEVLVSAKTKDLYSYKDGKKDYKVDYGDGYFRILEDGSYQFGITKDKAKFVLTNTLDEKENKYKKIEI LDIEKADRYVKSKKSLEELFGKYKNIYYYAVVNKGLFRGKEVYAINIYNEKIYAISENGLNEY
Sequences:
>Translated_463_residues MNFRDLFEKAVDFIDEKRKSIVAISLSTLGVIALIIVFFLSSNEFSVGNEANELLKIIEKRQYSIAVDYYTSIEKKFSDS KMERFNKSVSKKINKLLLNSGDKYLDGDISQESFIGLINTVKELNKISIDVDDLLAQADRVREMYKEENTTYDIAINYIS TVSILNGMGSNLDVYKQNIETIKESRDVYDSAVKDQKAYKYYEAIEKYNKVLKEDEKYYSMAQNGKEQCIEEMYDYYISR AEEANNSGDYERALQYIEYLKDDYSDDEKVQSLEKKYKKNLSLYTLTSDDIINVIAKKSGKDKANLSINSLPQMIKNNKY YYAEVYEYDKLINEVLVSAKTKDLYSYKDGKKDYKVDYGDGYFRILEDGSYQFGITKDKAKFVLTNTLDEKENKYKKIEI LDIEKADRYVKSKKSLEELFGKYKNIYYYAVVNKGLFRGKEVYAINIYNEKIYAISENGLNEY >Mature_463_residues MNFRDLFEKAVDFIDEKRKSIVAISLSTLGVIALIIVFFLSSNEFSVGNEANELLKIIEKRQYSIAVDYYTSIEKKFSDS KMERFNKSVSKKINKLLLNSGDKYLDGDISQESFIGLINTVKELNKISIDVDDLLAQADRVREMYKEENTTYDIAINYIS TVSILNGMGSNLDVYKQNIETIKESRDVYDSAVKDQKAYKYYEAIEKYNKVLKEDEKYYSMAQNGKEQCIEEMYDYYISR AEEANNSGDYERALQYIEYLKDDYSDDEKVQSLEKKYKKNLSLYTLTSDDIINVIAKKSGKDKANLSINSLPQMIKNNKY YYAEVYEYDKLINEVLVSAKTKDLYSYKDGKKDYKVDYGDGYFRILEDGSYQFGITKDKAKFVLTNTLDEKENKYKKIEI LDIEKADRYVKSKKSLEELFGKYKNIYYYAVVNKGLFRGKEVYAINIYNEKIYAISENGLNEY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54048; Mature: 54048
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFRDLFEKAVDFIDEKRKSIVAISLSTLGVIALIIVFFLSSNEFSVGNEANELLKIIEK CCHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH RQYSIAVDYYTSIEKKFSDSKMERFNKSVSKKINKLLLNSGDKYLDGDISQESFIGLINT HCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH VKELNKISIDVDDLLAQADRVREMYKEENTTYDIAINYISTVSILNGMGSNLDVYKQNIE HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHCCCCCHHHHHHHHH TIKESRDVYDSAVKDQKAYKYYEAIEKYNKVLKEDEKYYSMAQNGKEQCIEEMYDYYISR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH AEEANNSGDYERALQYIEYLKDDYSDDEKVQSLEKKYKKNLSLYTLTSDDIINVIAKKSG HHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCC KDKANLSINSLPQMIKNNKYYYAEVYEYDKLINEVLVSAKTKDLYSYKDGKKDYKVDYGD CCCCCCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCC GYFRILEDGSYQFGITKDKAKFVLTNTLDEKENKYKKIEILDIEKADRYVKSKKSLEELF CEEEEEECCCEEECEECCCCCEEEECCHHHHCCCEEEEEEEECHHHHHHHHHHHHHHHHH GKYKNIYYYAVVNKGLFRGKEVYAINIYNEKIYAISENGLNEY HHHHCEEEEEEECCCCCCCCEEEEEEEECCEEEEEECCCCCCC >Mature Secondary Structure MNFRDLFEKAVDFIDEKRKSIVAISLSTLGVIALIIVFFLSSNEFSVGNEANELLKIIEK CCHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH RQYSIAVDYYTSIEKKFSDSKMERFNKSVSKKINKLLLNSGDKYLDGDISQESFIGLINT HCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH VKELNKISIDVDDLLAQADRVREMYKEENTTYDIAINYISTVSILNGMGSNLDVYKQNIE HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHCCCCCHHHHHHHHH TIKESRDVYDSAVKDQKAYKYYEAIEKYNKVLKEDEKYYSMAQNGKEQCIEEMYDYYISR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH AEEANNSGDYERALQYIEYLKDDYSDDEKVQSLEKKYKKNLSLYTLTSDDIINVIAKKSG HHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCC KDKANLSINSLPQMIKNNKYYYAEVYEYDKLINEVLVSAKTKDLYSYKDGKKDYKVDYGD CCCCCCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCC GYFRILEDGSYQFGITKDKAKFVLTNTLDEKENKYKKIEILDIEKADRYVKSKKSLEELF CEEEEEECCCEEECEECCCCCEEEECCHHHHCCCEEEEEEEECHHHHHHHHHHHHHHHHH GKYKNIYYYAVVNKGLFRGKEVYAINIYNEKIYAISENGLNEY HHHHCEEEEEEECCCCCCCCEEEEEEEECCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA