| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699038
Identifier: 126699038
GI number: 126699038
Start: 1664870
End: 1665160
Strand: Direct
Name: 126699038
Synonym: CD1434
Alternate gene names: NA
Gene position: 1664870-1665160 (Clockwise)
Preceding gene: 126699036
Following gene: 126699039
Centisome position: 38.81
GC content: 28.18
Gene sequence:
>291_bases GTGAGTGGATTGAAAAAAATTCTAAGAATTTTAGTTATCTCCATGATGATATGTTTTGCAATGACTTTTGCATTAGTGTT AATAAATTCAGTTATGGGAGTACATATAGGATTGGATTATTACTTTTTGATGGGAAGTGTGCTTACAGTTTGTTTAACAA TTGGAATTGTTTTATGCAATGCTAGAAAAATATTTGATAGCAAAGCTATACACAAGACAAGAACGAAAACTGTCAGTAAT AATAAAAAACAAAAGAGTCATTCTAGGGATATAAAAAGAAAGATATCATAA
Upstream 100 bases:
>100_bases AATATTTTCCTAATATAAATGACAATAGTAATTGCTATTTTTTTACTAATTTGGTATAGTAATGGATAAGGGGTAGTGTC AATTTTAGTGATTATACGAG
Downstream 100 bases:
>100_bases TTTATGTAAAGGAAATATTTATGTATAAAATAATGATTGATAGGTAAAATAAAAACACGATTTAACTTGTGTTTTTATTT TTTTTCAAGAATTATGATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MSGLKKILRILVISMMICFAMTFALVLINSVMGVHIGLDYYFLMGSVLTVCLTIGIVLCNARKIFDSKAIHKTRTKTVSN NKKQKSHSRDIKRKIS
Sequences:
>Translated_96_residues MSGLKKILRILVISMMICFAMTFALVLINSVMGVHIGLDYYFLMGSVLTVCLTIGIVLCNARKIFDSKAIHKTRTKTVSN NKKQKSHSRDIKRKIS >Mature_95_residues SGLKKILRILVISMMICFAMTFALVLINSVMGVHIGLDYYFLMGSVLTVCLTIGIVLCNARKIFDSKAIHKTRTKTVSNN KKQKSHSRDIKRKIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10804; Mature: 10673
Theoretical pI: Translated: 11.05; Mature: 11.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 9.4 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 8.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGLKKILRILVISMMICFAMTFALVLINSVMGVHIGLDYYFLMGSVLTVCLTIGIVLCN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARKIFDSKAIHKTRTKTVSNNKKQKSHSRDIKRKIS HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC >Mature Secondary Structure SGLKKILRILVISMMICFAMTFALVLINSVMGVHIGLDYYFLMGSVLTVCLTIGIVLCN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARKIFDSKAIHKTRTKTVSNNKKQKSHSRDIKRKIS HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA