| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698973
Identifier: 126698973
GI number: 126698973
Start: 1585879
End: 1586577
Strand: Direct
Name: 126698973
Synonym: CD1372
Alternate gene names: NA
Gene position: 1585879-1586577 (Clockwise)
Preceding gene: 126698972
Following gene: 126698974
Centisome position: 36.96
GC content: 30.04
Gene sequence:
>699_bases ATGAAGCTAATTGATAAACTACCATCATTTGATAGAAATTACATTGTAGAGGAGATACAAGGTGCATACGATACAGAATT AAATATTCTTAAAGAAGATATTGATGATACCTTTAACCAATTATTTGTTGACACTGCAACATGGGGATTAGATATGTGGG AAGACATACTCTGCATTGAAAAAAAAGAACTTGATTTTGACACAAGACGTAGCAATATAAAAGCTAAAATGAGAAGCAGA GGTACTAGTACTATTGAAGTTATAAAAAGTATATGTGAGGCATATACAAAATCAGAAACAGATATAAAAGTTTATAGTGA TGAATTTACATTCGTATTGAGTTTTATAGCAAATAACTGTGACTATAAAACTCTTTTAGATTGTAGTGATATGATTGAAA GAGTAAAACCTGCTCACTTATTACACTATTTAGAACCAATAATACTAGATAAAAGTATGGTCTATTGTGGTGGAGGTATG GTATGTAGTGAAGAGGTAAAAGTTCATCCATACTTTGAACCAATTATAAAATGTAGTGCTGTTGTAAACTGTGGAGCTGG AATGTTAAGTAGAGAAGAAATAAAGGTTTATCCTTTAAGCATTAAATGCATTGAAAATAATTGTAAGATTAATATAGCTA TTGCAAATGATACAGGTGTAGAAAATGTAGTAGTTTATCCTAAATCGGAGGTGGTATAA
Upstream 100 bases:
>100_bases TAAGTAACCTACTTATAAATGGAAGTACAGATAATATAACTATTAATGAAGATAAAATACCTAGTGTAACAACTGTTAAT TTTAGTGAGGTGGAAAATCA
Downstream 100 bases:
>100_bases TTGGAAGAAAAATTTTATATAATATTAACCAAAATTGGTAGAGAAAAAATAGCAAATGCAACTGCACTAGGAGAGCTTGT TGGATTAACCAAGTTTCAAG
Product: phage protein
Products: NA
Alternate protein names: Phage Protein
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MKLIDKLPSFDRNYIVEEIQGAYDTELNILKEDIDDTFNQLFVDTATWGLDMWEDILCIEKKELDFDTRRSNIKAKMRSR GTSTIEVIKSICEAYTKSETDIKVYSDEFTFVLSFIANNCDYKTLLDCSDMIERVKPAHLLHYLEPIILDKSMVYCGGGM VCSEEVKVHPYFEPIIKCSAVVNCGAGMLSREEIKVYPLSIKCIENNCKINIAIANDTGVENVVVYPKSEVV
Sequences:
>Translated_232_residues MKLIDKLPSFDRNYIVEEIQGAYDTELNILKEDIDDTFNQLFVDTATWGLDMWEDILCIEKKELDFDTRRSNIKAKMRSR GTSTIEVIKSICEAYTKSETDIKVYSDEFTFVLSFIANNCDYKTLLDCSDMIERVKPAHLLHYLEPIILDKSMVYCGGGM VCSEEVKVHPYFEPIIKCSAVVNCGAGMLSREEIKVYPLSIKCIENNCKINIAIANDTGVENVVVYPKSEVV >Mature_232_residues MKLIDKLPSFDRNYIVEEIQGAYDTELNILKEDIDDTFNQLFVDTATWGLDMWEDILCIEKKELDFDTRRSNIKAKMRSR GTSTIEVIKSICEAYTKSETDIKVYSDEFTFVLSFIANNCDYKTLLDCSDMIERVKPAHLLHYLEPIILDKSMVYCGGGM VCSEEVKVHPYFEPIIKCSAVVNCGAGMLSREEIKVYPLSIKCIENNCKINIAIANDTGVENVVVYPKSEVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26445; Mature: 26445
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLIDKLPSFDRNYIVEEIQGAYDTELNILKEDIDDTFNQLFVDTATWGLDMWEDILCIE CCHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH KKELDFDTRRSNIKAKMRSRGTSTIEVIKSICEAYTKSETDIKVYSDEFTFVLSFIANNC HCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCC DYKTLLDCSDMIERVKPAHLLHYLEPIILDKSMVYCGGGMVCSEEVKVHPYFEPIIKCSA CCHHHHCHHHHHHHHCHHHHHHHHHHHHHCCCEEEECCCEEECCCCEECCCHHHHHHHHH VVNCGAGMLSREEIKVYPLSIKCIENNCKINIAIANDTGVENVVVYPKSEVV HHHCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEECCCCCCEEEEECCCCCC >Mature Secondary Structure MKLIDKLPSFDRNYIVEEIQGAYDTELNILKEDIDDTFNQLFVDTATWGLDMWEDILCIE CCHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH KKELDFDTRRSNIKAKMRSRGTSTIEVIKSICEAYTKSETDIKVYSDEFTFVLSFIANNC HCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCC DYKTLLDCSDMIERVKPAHLLHYLEPIILDKSMVYCGGGMVCSEEVKVHPYFEPIIKCSA CCHHHHCHHHHHHHHCHHHHHHHHHHHHHCCCEEEECCCEEECCCCEECCCHHHHHHHHH VVNCGAGMLSREEIKVYPLSIKCIENNCKINIAIANDTGVENVVVYPKSEVV HHHCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEECCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA