| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698887
Identifier: 126698887
GI number: 126698887
Start: 1498573
End: 1498773
Strand: Direct
Name: 126698887
Synonym: CD1290
Alternate gene names: NA
Gene position: 1498573-1498773 (Clockwise)
Preceding gene: 126698886
Following gene: 126698888
Centisome position: 34.93
GC content: 27.36
Gene sequence:
>201_bases ATGGATGATGTTTCAAGACAAAATGCTATAAAAGCTTTAAAACAAACAAAAATGGAAATAGCAGGAGAGTATGGAATGAA TTATGAAGATGCTTTTGAAATAATAGAAAATGCGTCTAATAAAGGTGTTTTAGAAGGTTACTTTAAAAAGCTTGAAAAGA AAAAAAATTTAGGTCAAGGTATATCTAGGCATTTAGAATAA
Upstream 100 bases:
>100_bases TCATTTTAAAAAATATATATATTACATAAAATACCAATTATAACAATCTTTTATTAGTAAAAACTACTTATATATAAATT TTACTGATAGGAGGATTCTT
Downstream 100 bases:
>100_bases AAAAAGTTAAATGTGAGAAAATAAGTTTAAATAAACTTTAAGAGGTGACATCGATGAAAAAATTAGCTAGTACTGCTTTG GCTATATTAATTGCGCTTAC
Product: small acid-soluble spore protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 66; Mature: 66
Protein sequence:
>66_residues MDDVSRQNAIKALKQTKMEIAGEYGMNYEDAFEIIENASNKGVLEGYFKKLEKKKNLGQGISRHLE
Sequences:
>Translated_66_residues MDDVSRQNAIKALKQTKMEIAGEYGMNYEDAFEIIENASNKGVLEGYFKKLEKKKNLGQGISRHLE >Mature_66_residues MDDVSRQNAIKALKQTKMEIAGEYGMNYEDAFEIIENASNKGVLEGYFKKLEKKKNLGQGISRHLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7522; Mature: 7522
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDVSRQNAIKALKQTKMEIAGEYGMNYEDAFEIIENASNKGVLEGYFKKLEKKKNLGQG CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH ISRHLE HHHHCC >Mature Secondary Structure MDDVSRQNAIKALKQTKMEIAGEYGMNYEDAFEIIENASNKGVLEGYFKKLEKKKNLGQG CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH ISRHLE HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA