Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698881

Identifier: 126698881

GI number: 126698881

Start: 1491712

End: 1493883

Strand: Direct

Name: 126698881

Synonym: CD1284

Alternate gene names: NA

Gene position: 1491712-1493883 (Clockwise)

Preceding gene: 126698880

Following gene: 126698882

Centisome position: 34.77

GC content: 29.33

Gene sequence:

>2172_bases
ATGAGAAAAAAGATTATGTCGTTGTTTGCAATAGTCATTATGATTTTTGTATCAACTGCTAGCTATGGTTTTGCTGAAGA
AAAAGGCAAGGTCATATTTATTGATATGAATAGGACCAATCTTGGAAGTATGATGAATATTCCAATCTTGAAAAATGAGA
TAGAAAAGAGAGGCTATGTAGCTCTCATGAATATAAGAGGGGATCAAGGTACTGATGATAGAAGGTCTTATGCAAGTATG
GGTGCAGGAACAAGAGCTAGTGTAACTACTGAAGACTATATCAATTTTCAAAAAGTAGACCAAGATACTGCTAAAGCTTT
TGAAGTCGCAACAGGTCAAAAAGCTAAAGAAATAAATGATTTAGGCATTAATAGATCTATAAATGAAAATCTTGAGTATG
GAGAATATGGAGCAAATTTAGGGTCATTAGGAAAAACTTTATCAGAAAATGGTTTAAAGACATCTGTAATTGGAAATGCT
GATATAATTGAAAATAATCAATTAGTTAAAAACAGAAACTTATGTTTAGTAGCTATGGACCAATATGGAAGGATTGATTC
AGGTAATATTGATAATATTAATAAGAAAGATTCTAAAATGCCATTTGGAATATCTACAGATTATGATAAATTACTAGATG
AAACTAAAAAATCCTATAAAAATAGTGATGCTATATTTGTAGAACTTGGAGATACATATAGATTAGATATGTATAGATTA
AATCTAAATGATAATACTTATGATATAATGAAGAAAAATATTGTAAAAAATATAAATAAATATCTTGAACAAGTATTTTC
TATGGTTGGAGAAAATGACACTGTTTATATAGCAAGTGCATTTCCAAGTGACCTAGATTATAAGAATAAGAGAAGACTTT
CTCCAATAATAAAATTTAGTGGAGAAGGGAAAGGTCTACTGGAATCTGCCACAACAAGAAAGGCTGGAATTGTTGCCAAT
TTAGATGTTGGAGTAGATATACTAGGTACATTTGGTCTTGAAAATAAAGAGATGGTAGGTAGAAGTTATACTTTAGTAAA
TAAAGAGGACAATATTAGCTATCTAAAATCACTTTATGAAAGGATAGTGTCTATATCTTCAATAAGGTCAACTATTATAA
ATGGCTTTGTAGGCGTAATATCTGCTTCTTGGGTAATTGCCATGTTTGCGATTTTCTTTAGAAATTATATGCCACATAAA
GAGCGTGTATTCAAAGTACTTAAGGAGTTTATAAAATTAGGCATAATAATGCCACTATCATTTATGTTAGCTCCTTTGAT
GAATTTTAAAACTCCAATTTCAATATCTTTGGGAATATTTGCAACTACGCTAATATTATACTTGTTAGGTAGAAAATTAT
TTAAGGACAATGATATAAAGCACATGGGATTTTTTGCAACACTTACTATTTTAGTCATAGTTATAGATTCTGTATTTGGA
ACATACTTAATGCAAAATAACATAATGAGTTATGATGCTGTCATAGGAGCTAGGTACTATGGTGTAGGAAATGAATATGA
AGGTGTAACTATAGCAAGTGCAGTATTTGGCTTAGCAGTATTATTACATTATAAGAAGGTATCTAAATTACTTGTTGTAA
TTTTTTCATTAATAATACTTATAACTAGTGCATATCCTTCAATGGGTGCAAATGTTGGTGGAGCTATATCAGAATGTGTA
GCATATTTGTTGTTTATAATGCTTATATATGACATTAAAATAGATTTTAAGAAAGCTGTATTATTAGCTGTTTCAGCTGT
AGTTGTCGTTTTTGCATTTGCAGCTTTAGATATACTTTCAGGTAGTGAATCTCATTTAGGTATGTTTGTACAGAGAATTT
TCCTAAATGGACCAGGAGAGATATTACAAACATTTGGAAGAAAAATTCAAATGAATATGCAACTAGCACAGACAAGTGTA
TGGGTAAATATTTTACTTGTAGGAATTGGAGTAATTGCAGTGCTTATATTTAAACCATCTAGACACTTTAGAAAGATAAT
GAATAATTTTCCAATCTTGTTTAAAGGGTTTATTGCATCTATGGTTGGTTGTATAATTACTCTTTTAGTTAATGATTCTG
GAATAGTTGCTGCATCTACAGCATCTATATATATACTTATACCACTAATAATAATAAGTATAAATATGATAATATTTGAA
AAAAATAACTAA

Upstream 100 bases:

>100_bases
TAGTCATAAAAATGCAAGAGCTATAATTAAAAAATTTGAAAGAGATGAGATACTTGAAGAAGTAATCACGCACTATCTGA
ATAGAAAGTAGGTCAAATAA

Downstream 100 bases:

>100_bases
AAAAATTTTTACTGTTCATATAGGATTTAAATAAAAAATGCAATATGATTATTAATGTAAACTGGATGCTTACATAAAAA
ATCATATTGCAATTTTTATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 723; Mature: 723

Protein sequence:

>723_residues
MRKKIMSLFAIVIMIFVSTASYGFAEEKGKVIFIDMNRTNLGSMMNIPILKNEIEKRGYVALMNIRGDQGTDDRRSYASM
GAGTRASVTTEDYINFQKVDQDTAKAFEVATGQKAKEINDLGINRSINENLEYGEYGANLGSLGKTLSENGLKTSVIGNA
DIIENNQLVKNRNLCLVAMDQYGRIDSGNIDNINKKDSKMPFGISTDYDKLLDETKKSYKNSDAIFVELGDTYRLDMYRL
NLNDNTYDIMKKNIVKNINKYLEQVFSMVGENDTVYIASAFPSDLDYKNKRRLSPIIKFSGEGKGLLESATTRKAGIVAN
LDVGVDILGTFGLENKEMVGRSYTLVNKEDNISYLKSLYERIVSISSIRSTIINGFVGVISASWVIAMFAIFFRNYMPHK
ERVFKVLKEFIKLGIIMPLSFMLAPLMNFKTPISISLGIFATTLILYLLGRKLFKDNDIKHMGFFATLTILVIVIDSVFG
TYLMQNNIMSYDAVIGARYYGVGNEYEGVTIASAVFGLAVLLHYKKVSKLLVVIFSLIILITSAYPSMGANVGGAISECV
AYLLFIMLIYDIKIDFKKAVLLAVSAVVVVFAFAALDILSGSESHLGMFVQRIFLNGPGEILQTFGRKIQMNMQLAQTSV
WVNILLVGIGVIAVLIFKPSRHFRKIMNNFPILFKGFIASMVGCIITLLVNDSGIVAASTASIYILIPLIIISINMIIFE
KNN

Sequences:

>Translated_723_residues
MRKKIMSLFAIVIMIFVSTASYGFAEEKGKVIFIDMNRTNLGSMMNIPILKNEIEKRGYVALMNIRGDQGTDDRRSYASM
GAGTRASVTTEDYINFQKVDQDTAKAFEVATGQKAKEINDLGINRSINENLEYGEYGANLGSLGKTLSENGLKTSVIGNA
DIIENNQLVKNRNLCLVAMDQYGRIDSGNIDNINKKDSKMPFGISTDYDKLLDETKKSYKNSDAIFVELGDTYRLDMYRL
NLNDNTYDIMKKNIVKNINKYLEQVFSMVGENDTVYIASAFPSDLDYKNKRRLSPIIKFSGEGKGLLESATTRKAGIVAN
LDVGVDILGTFGLENKEMVGRSYTLVNKEDNISYLKSLYERIVSISSIRSTIINGFVGVISASWVIAMFAIFFRNYMPHK
ERVFKVLKEFIKLGIIMPLSFMLAPLMNFKTPISISLGIFATTLILYLLGRKLFKDNDIKHMGFFATLTILVIVIDSVFG
TYLMQNNIMSYDAVIGARYYGVGNEYEGVTIASAVFGLAVLLHYKKVSKLLVVIFSLIILITSAYPSMGANVGGAISECV
AYLLFIMLIYDIKIDFKKAVLLAVSAVVVVFAFAALDILSGSESHLGMFVQRIFLNGPGEILQTFGRKIQMNMQLAQTSV
WVNILLVGIGVIAVLIFKPSRHFRKIMNNFPILFKGFIASMVGCIITLLVNDSGIVAASTASIYILIPLIIISINMIIFE
KNN
>Mature_723_residues
MRKKIMSLFAIVIMIFVSTASYGFAEEKGKVIFIDMNRTNLGSMMNIPILKNEIEKRGYVALMNIRGDQGTDDRRSYASM
GAGTRASVTTEDYINFQKVDQDTAKAFEVATGQKAKEINDLGINRSINENLEYGEYGANLGSLGKTLSENGLKTSVIGNA
DIIENNQLVKNRNLCLVAMDQYGRIDSGNIDNINKKDSKMPFGISTDYDKLLDETKKSYKNSDAIFVELGDTYRLDMYRL
NLNDNTYDIMKKNIVKNINKYLEQVFSMVGENDTVYIASAFPSDLDYKNKRRLSPIIKFSGEGKGLLESATTRKAGIVAN
LDVGVDILGTFGLENKEMVGRSYTLVNKEDNISYLKSLYERIVSISSIRSTIINGFVGVISASWVIAMFAIFFRNYMPHK
ERVFKVLKEFIKLGIIMPLSFMLAPLMNFKTPISISLGIFATTLILYLLGRKLFKDNDIKHMGFFATLTILVIVIDSVFG
TYLMQNNIMSYDAVIGARYYGVGNEYEGVTIASAVFGLAVLLHYKKVSKLLVVIFSLIILITSAYPSMGANVGGAISECV
AYLLFIMLIYDIKIDFKKAVLLAVSAVVVVFAFAALDILSGSESHLGMFVQRIFLNGPGEILQTFGRKIQMNMQLAQTSV
WVNILLVGIGVIAVLIFKPSRHFRKIMNNFPILFKGFIASMVGCIITLLVNDSGIVAASTASIYILIPLIIISINMIIFE
KNN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 80403; Mature: 80403

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKKIMSLFAIVIMIFVSTASYGFAEEKGKVIFIDMNRTNLGSMMNIPILKNEIEKRGYV
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCEECCCHHHHHHHCCCCE
ALMNIRGDQGTDDRRSYASMGAGTRASVTTEDYINFQKVDQDTAKAFEVATGQKAKEIND
EEEEECCCCCCCHHHHHHHCCCCCCCCCCHHHHCCHHHCCHHHHHHHHHHCCCHHHHHHH
LGINRSINENLEYGEYGANLGSLGKTLSENGLKTSVIGNADIIENNQLVKNRNLCLVAMD
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCEECCCCEEECCCEEEEEEC
QYGRIDSGNIDNINKKDSKMPFGISTDYDKLLDETKKSYKNSDAIFVELGDTYRLDMYRL
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEEE
NLNDNTYDIMKKNIVKNINKYLEQVFSMVGENDTVYIASAFPSDLDYKNKRRLSPIIKFS
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHCCHHEEEC
GEGKGLLESATTRKAGIVANLDVGVDILGTFGLENKEMVGRSYTLVNKEDNISYLKSLYE
CCCCCHHHHHCCCCCCEEEECCCCCEEHEECCCCCHHHCCCEEEEECCCCCHHHHHHHHH
RIVSISSIRSTIINGFVGVISASWVIAMFAIFFRNYMPHKERVFKVLKEFIKLGIIMPLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
FMLAPLMNFKTPISISLGIFATTLILYLLGRKLFKDNDIKHMGFFATLTILVIVIDSVFG
HHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
TYLMQNNIMSYDAVIGARYYGVGNEYEGVTIASAVFGLAVLLHYKKVSKLLVVIFSLIIL
HHHHHCCCCHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITSAYPSMGANVGGAISECVAYLLFIMLIYDIKIDFKKAVLLAVSAVVVVFAFAALDILS
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GSESHLGMFVQRIFLNGPGEILQTFGRKIQMNMQLAQTSVWVNILLVGIGVIAVLIFKPS
CCCHHHHHHHHHHHHCCCHHHHHHHCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RHFRKIMNNFPILFKGFIASMVGCIITLLVNDSGIVAASTASIYILIPLIIISINMIIFE
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCEEEEEE
KNN
CCC
>Mature Secondary Structure
MRKKIMSLFAIVIMIFVSTASYGFAEEKGKVIFIDMNRTNLGSMMNIPILKNEIEKRGYV
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCEECCCHHHHHHHCCCCE
ALMNIRGDQGTDDRRSYASMGAGTRASVTTEDYINFQKVDQDTAKAFEVATGQKAKEIND
EEEEECCCCCCCHHHHHHHCCCCCCCCCCHHHHCCHHHCCHHHHHHHHHHCCCHHHHHHH
LGINRSINENLEYGEYGANLGSLGKTLSENGLKTSVIGNADIIENNQLVKNRNLCLVAMD
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCEECCCCEEECCCEEEEEEC
QYGRIDSGNIDNINKKDSKMPFGISTDYDKLLDETKKSYKNSDAIFVELGDTYRLDMYRL
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEEE
NLNDNTYDIMKKNIVKNINKYLEQVFSMVGENDTVYIASAFPSDLDYKNKRRLSPIIKFS
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHCCHHEEEC
GEGKGLLESATTRKAGIVANLDVGVDILGTFGLENKEMVGRSYTLVNKEDNISYLKSLYE
CCCCCHHHHHCCCCCCEEEECCCCCEEHEECCCCCHHHCCCEEEEECCCCCHHHHHHHHH
RIVSISSIRSTIINGFVGVISASWVIAMFAIFFRNYMPHKERVFKVLKEFIKLGIIMPLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
FMLAPLMNFKTPISISLGIFATTLILYLLGRKLFKDNDIKHMGFFATLTILVIVIDSVFG
HHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
TYLMQNNIMSYDAVIGARYYGVGNEYEGVTIASAVFGLAVLLHYKKVSKLLVVIFSLIIL
HHHHHCCCCHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITSAYPSMGANVGGAISECVAYLLFIMLIYDIKIDFKKAVLLAVSAVVVVFAFAALDILS
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GSESHLGMFVQRIFLNGPGEILQTFGRKIQMNMQLAQTSVWVNILLVGIGVIAVLIFKPS
CCCHHHHHHHHHHHHCCCHHHHHHHCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RHFRKIMNNFPILFKGFIASMVGCIITLLVNDSGIVAASTASIYILIPLIIISINMIIFE
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCEEEEEE
KNN
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA