Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is trmU

Identifier: 126698878

GI number:

Start: 1487247

End: 1488332

Strand: Direct

Name: trmU

Synonym: CD1281

Alternate gene names: NA

Gene position: NA

Preceding gene: 126698877

Following gene: 126698879

Centisome position: NA

GC content: NA

Gene sequence:

>1086_bases
TTGTTTATGAATAAAAAAGTAATGATAGGTATGAGTGGAGGAGTTGATAGCTCTGTAGCTGCATATCTTTTAAAACAACA
AGGATATGATGTCATTGGTGTTACTATGAAGTTGTGGCAAGATGATGATGTTGTTGAAATTGAAGGTGGTTGTTGCTCTT
TATCTGCTGTTGAAGATGCTAGAAGGGTAGCAAATAAAATAGGTATACCATTTTATGTTTTAAATTTTAGAGAAGTGTTT
AAAGAAAAAGTAATAGATTATTTTATAGATGAATATTTGGAAGGAAAAACTCCTAATCCCTGTATAGCTTGTAATAAACA
TATAAAATTTGATGATTTTTATAAGAAGGCTAGACAAATAGGTTGTGATTATGTAGCTACAGGTCACTATGCAAAGATAG
AAAAGGATGAAAGTACAGGAAGATATTTGCTAAAAAAATCTGTTACAGATAAAAAAGACCAAACTTATGCACTTTATAAT
CTTACACAAGAGCAACTAGAGCATACTTTATTGCCAATAGGTGACTATGAAAAAGATAGAGTAAGAGAAATTGCTAAGGA
AATGGGTATGGCAGTACACAATAAGCCTGATAGTCAAGAAATTTGTTTTGTTAAAGATAATGACTATGCAAATTATGTAA
AAAAACATTCTAAAAAGCGTATTGAAGAAGGTTTTTTTGTAGATACTAAAGGCAATATACTTGGAAAACATAAGGGTATA
TTATATTATACTATAGGCCAAAGAAAAGGGCTTGGAATTACTTTTGGAAAACCAATGTTTGTAATAGACATAAATCCAAT
AAATAATACCATAGTTCTTGGAGACAATGAAGATTTATTTAAAAAGGAACTTATTGCTAAAGATGTTAACTTTATATCAA
TAGATACGTTAGAAGAACCCTTAAGAGTTCAAGCCAAAATAAGATATTCAGCAAAACCATCACCAGCTACTATTCATAGA
GTAGGAGAAGATACTATTAAAATAGTTTTTGATGAAGCTCAAAGAGCTATTACTAAAGGTCAATCTGTAGTAATGTATGA
TGGAGATATTGTAGTAGGTGGAGGTATAATCGAGAAAAGTTTATAA

Upstream 100 bases:

>100_bases
TGATTATTTTTTTAGAAAATAGAACAAGCTATATTTTAAATAAGTACAATACTTGCTCTATATGGTATAATAATAAGTAA
TGCAAAAGATGAGGTGAAAT

Downstream 100 bases:

>100_bases
AAACATCTAAAAAATTAAAAAAATAAGCAATAAAGTATATTAAGAGTAAATAAAGTTTATAAAATAAATTTATTGTATAT
GAAAATATAGTATTGATTAA

Product: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>361_residues
MFMNKKVMIGMSGGVDSSVAAYLLKQQGYDVIGVTMKLWQDDDVVEIEGGCCSLSAVEDARRVANKIGIPFYVLNFREVF
KEKVIDYFIDEYLEGKTPNPCIACNKHIKFDDFYKKARQIGCDYVATGHYAKIEKDESTGRYLLKKSVTDKKDQTYALYN
LTQEQLEHTLLPIGDYEKDRVREIAKEMGMAVHNKPDSQEICFVKDNDYANYVKKHSKKRIEEGFFVDTKGNILGKHKGI
LYYTIGQRKGLGITFGKPMFVIDINPINNTIVLGDNEDLFKKELIAKDVNFISIDTLEEPLRVQAKIRYSAKPSPATIHR
VGEDTIKIVFDEAQRAITKGQSVVMYDGDIVVGGGIIEKSL

Sequences:
NA

Specific function: NA

COG id: COG0482

COG function: function code J; Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA