Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

Click here to switch to the map view.

The map label for this gene is 126698841

Identifier: 126698841

GI number: 126698841

Start: 1446815

End: 1447339

Strand: Direct

Name: 126698841

Synonym: CD1245

Alternate gene names: NA

Gene position: 1446815-1447339 (Clockwise)

Preceding gene: 126698840

Following gene: 126698842

Centisome position: 33.72

GC content: 24.0

Gene sequence:

>525_bases
ATGAAACATAAATATGGTTACTTGCTTTTGGAAAGTGTAGTATCATTGTCTTCAATGGTGATAATTATACTAGTTTTATA
TTCTATATTTTTGTCTACAATAAACTTAAAGTTAAAAGTAGAAGATAAGATAGAACTACAACAACAAAGTCTTGAAATCA
TAAAATCTATGGAAGGAATTATTGGCAATTCTATGGGAATAATGAATATATCTAATTATGAAGAAACATTTAAAAAGACA
ATGTCTATAAAATCTAGATATGTAGATGAAAATAATAATGAAGAAGGCATAAGTAATAAAGAAATTATATTGAATGAAAG
ACGAAATAAGTTATTTGTAAATTCTTTAAATGGCGAAAGTAGTCAAGCAGGTGGTTATGAAATTGGAGATTATGTAGATG
AAATGTATGTATCAATTACTAATAATGGTCAATATGTTAATATTAAATTGAAATTATCAAAACGTAGTCAAAAATATGAG
ACTGATTTCAAAATAAAAGTATGGAATTTTAGTGAAAGTATATAA

Upstream 100 bases:

>100_bases
CCTCAAAAGGCGTCTACAATAGAGATATATAATAATAGATTAAGAAAAACTATAACAATAACACCTGTAAGTGGAAGAGT
ACTTCTGAAAGAGGGAAAAT

Downstream 100 bases:

>100_bases
AAATACATAAATTTAAGAGAAAGAAATGACATCAATAAGTCATATAAAATATAATTATTGAGAACTATATAACTAAATAA
TATCAATATGTAAAGTGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MKHKYGYLLLESVVSLSSMVIIILVLYSIFLSTINLKLKVEDKIELQQQSLEIIKSMEGIIGNSMGIMNISNYEETFKKT
MSIKSRYVDENNNEEGISNKEIILNERRNKLFVNSLNGESSQAGGYEIGDYVDEMYVSITNNGQYVNIKLKLSKRSQKYE
TDFKIKVWNFSESI

Sequences:

>Translated_174_residues
MKHKYGYLLLESVVSLSSMVIIILVLYSIFLSTINLKLKVEDKIELQQQSLEIIKSMEGIIGNSMGIMNISNYEETFKKT
MSIKSRYVDENNNEEGISNKEIILNERRNKLFVNSLNGESSQAGGYEIGDYVDEMYVSITNNGQYVNIKLKLSKRSQKYE
TDFKIKVWNFSESI
>Mature_174_residues
MKHKYGYLLLESVVSLSSMVIIILVLYSIFLSTINLKLKVEDKIELQQQSLEIIKSMEGIIGNSMGIMNISNYEETFKKT
MSIKSRYVDENNNEEGISNKEIILNERRNKLFVNSLNGESSQAGGYEIGDYVDEMYVSITNNGQYVNIKLKLSKRSQKYE
TDFKIKVWNFSESI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20049; Mature: 20049

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHKYGYLLLESVVSLSSMVIIILVLYSIFLSTINLKLKVEDKIELQQQSLEIIKSMEGI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHH
IGNSMGIMNISNYEETFKKTMSIKSRYVDENNNEEGISNKEIILNERRNKLFVNSLNGES
HCCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCC
SQAGGYEIGDYVDEMYVSITNNGQYVNIKLKLSKRSQKYETDFKIKVWNFSESI
CCCCCCCHHHHHHHHEEEEECCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MKHKYGYLLLESVVSLSSMVIIILVLYSIFLSTINLKLKVEDKIELQQQSLEIIKSMEGI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHH
IGNSMGIMNISNYEETFKKTMSIKSRYVDENNNEEGISNKEIILNERRNKLFVNSLNGES
HCCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCC
SQAGGYEIGDYVDEMYVSITNNGQYVNIKLKLSKRSQKYETDFKIKVWNFSESI
CCCCCCCHHHHHHHHEEEEECCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA