| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698841
Identifier: 126698841
GI number: 126698841
Start: 1446815
End: 1447339
Strand: Direct
Name: 126698841
Synonym: CD1245
Alternate gene names: NA
Gene position: 1446815-1447339 (Clockwise)
Preceding gene: 126698840
Following gene: 126698842
Centisome position: 33.72
GC content: 24.0
Gene sequence:
>525_bases ATGAAACATAAATATGGTTACTTGCTTTTGGAAAGTGTAGTATCATTGTCTTCAATGGTGATAATTATACTAGTTTTATA TTCTATATTTTTGTCTACAATAAACTTAAAGTTAAAAGTAGAAGATAAGATAGAACTACAACAACAAAGTCTTGAAATCA TAAAATCTATGGAAGGAATTATTGGCAATTCTATGGGAATAATGAATATATCTAATTATGAAGAAACATTTAAAAAGACA ATGTCTATAAAATCTAGATATGTAGATGAAAATAATAATGAAGAAGGCATAAGTAATAAAGAAATTATATTGAATGAAAG ACGAAATAAGTTATTTGTAAATTCTTTAAATGGCGAAAGTAGTCAAGCAGGTGGTTATGAAATTGGAGATTATGTAGATG AAATGTATGTATCAATTACTAATAATGGTCAATATGTTAATATTAAATTGAAATTATCAAAACGTAGTCAAAAATATGAG ACTGATTTCAAAATAAAAGTATGGAATTTTAGTGAAAGTATATAA
Upstream 100 bases:
>100_bases CCTCAAAAGGCGTCTACAATAGAGATATATAATAATAGATTAAGAAAAACTATAACAATAACACCTGTAAGTGGAAGAGT ACTTCTGAAAGAGGGAAAAT
Downstream 100 bases:
>100_bases AAATACATAAATTTAAGAGAAAGAAATGACATCAATAAGTCATATAAAATATAATTATTGAGAACTATATAACTAAATAA TATCAATATGTAAAGTGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MKHKYGYLLLESVVSLSSMVIIILVLYSIFLSTINLKLKVEDKIELQQQSLEIIKSMEGIIGNSMGIMNISNYEETFKKT MSIKSRYVDENNNEEGISNKEIILNERRNKLFVNSLNGESSQAGGYEIGDYVDEMYVSITNNGQYVNIKLKLSKRSQKYE TDFKIKVWNFSESI
Sequences:
>Translated_174_residues MKHKYGYLLLESVVSLSSMVIIILVLYSIFLSTINLKLKVEDKIELQQQSLEIIKSMEGIIGNSMGIMNISNYEETFKKT MSIKSRYVDENNNEEGISNKEIILNERRNKLFVNSLNGESSQAGGYEIGDYVDEMYVSITNNGQYVNIKLKLSKRSQKYE TDFKIKVWNFSESI >Mature_174_residues MKHKYGYLLLESVVSLSSMVIIILVLYSIFLSTINLKLKVEDKIELQQQSLEIIKSMEGIIGNSMGIMNISNYEETFKKT MSIKSRYVDENNNEEGISNKEIILNERRNKLFVNSLNGESSQAGGYEIGDYVDEMYVSITNNGQYVNIKLKLSKRSQKYE TDFKIKVWNFSESI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20049; Mature: 20049
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHKYGYLLLESVVSLSSMVIIILVLYSIFLSTINLKLKVEDKIELQQQSLEIIKSMEGI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHH IGNSMGIMNISNYEETFKKTMSIKSRYVDENNNEEGISNKEIILNERRNKLFVNSLNGES HCCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCC SQAGGYEIGDYVDEMYVSITNNGQYVNIKLKLSKRSQKYETDFKIKVWNFSESI CCCCCCCHHHHHHHHEEEEECCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure MKHKYGYLLLESVVSLSSMVIIILVLYSIFLSTINLKLKVEDKIELQQQSLEIIKSMEGI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHH IGNSMGIMNISNYEETFKKTMSIKSRYVDENNNEEGISNKEIILNERRNKLFVNSLNGES HCCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCC SQAGGYEIGDYVDEMYVSITNNGQYVNIKLKLSKRSQKYETDFKIKVWNFSESI CCCCCCCHHHHHHHHEEEEECCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA