Click here to switch to the map view.

The map label for this gene is gcp [H]

Identifier: 126698798

GI number: 126698798

Start: 1400682

End: 1401752

Strand: Direct

Name: gcp [H]

Synonym: CD1202

Alternate gene names: 126698798

Gene position: 1400682-1401752 (Clockwise)

Preceding gene: 126698797

Following gene: 126698799

Centisome position: 32.65

GC content: 26.61

Gene sequence:

>1071_bases
ATGAAATTGGGAAATAATATAATAATTGGAATTGATACTAGCTGCTATACTACTTCTATAGCAGCTATCTCTTTAGATAA
GAAAGTTATATTCAATGAAAAAATAATGTTAGAAGTAAGGGATAATTCAAAAGGTTTAAGGCAAAGTGAAGCTGTATTTC
AACATATCAATAATTTAGGGATTCTTAGTGATAGGATAAAATCTTTTAAAGATAAGTTTAATGTAGAAGGAGTTTGCTCA
TCAAAAAAACCGAGACCTGTTGAAAACTCATATATGCCTGTATTCAATGTAGGTCATAATTTTGGAAAATTATTGTCTAG
TATATATGGTTGTAGGTTTTATGAGACTACTCATCAAGAGAATCATATTGAAGCAAGTTTATTAAATAGTAAATTAAAAA
ATAATAATAAATTTATTTCTGTTCATATGTCTGGTGGTACTACAGAGATACTTTTAACAAGCAAACAAGATAGTCATCAC
AATGTATGTGATACTAATTTAGGTAAAATTGCCAAAATAAGTATTAAAAAAGATGATAAAAGTAAGTTATACAATAATTT
TGGATATAATATAGATATAATTGGAGGAAGTAAAGATATTAGCTTTGGTCAACTTATAGATAGAGTAGGAATTAAGCTTG
GATATAAATTTCCTTCAGGAAAGTATTTGGATGAAAATGCTTTAAATTGTAATCTTAAAATAGAAAGTGGTCTGAAAACT
TCTGTAAGAGATGGGTATATGAATTTATCAGGATTAGAAAATCAGGTAAATAAGATTATAAATGATAATGGAGATAATAC
TAATCAAAAAGAATATATATCTAAATTAGTATTAGATTCAGTAGTTAGAAATATGTTTAAATCTCTAGTGTATTTATGTG
AAACTTATAATGTAAATGAAGTAATATTTGCTGGTGGAGTTTCTGCAAGTAAGTATATTCTTAGAGAATTAAGCATGAAG
TTAAGAAAAAAGCATATAGAAGCTTATTTTACAGAACCACAATATTCAACTGATAATGCTGTCGGGTGTGCTATAATAGG
ATTGAATAACTTTTTAGGAGAAAGAGTATGA

Upstream 100 bases:

>100_bases
CCTAATAAAGTATCAATAAATGAAGCAGTAGAACTTGCAAAAATATATTGTGATGATAAGTCTCCTAAATTTATAAATGG
TATATTGGGAAGTGTTGTTG

Downstream 100 bases:

>100_bases
AACTAAGAGCTTTAGATATAAGTGAAGCAAACTCATATATTAAAAGAATTTTAATAAACGACCCAATACTTTCTAATCTT
AAAGTTAAAGGAGAAATTTC

Product: O-sialoglycoprotein endopeptidase

Products: NA

Alternate protein names: Glycoprotease [H]

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MKLGNNIIIGIDTSCYTTSIAAISLDKKVIFNEKIMLEVRDNSKGLRQSEAVFQHINNLGILSDRIKSFKDKFNVEGVCS
SKKPRPVENSYMPVFNVGHNFGKLLSSIYGCRFYETTHQENHIEASLLNSKLKNNNKFISVHMSGGTTEILLTSKQDSHH
NVCDTNLGKIAKISIKKDDKSKLYNNFGYNIDIIGGSKDISFGQLIDRVGIKLGYKFPSGKYLDENALNCNLKIESGLKT
SVRDGYMNLSGLENQVNKIINDNGDNTNQKEYISKLVLDSVVRNMFKSLVYLCETYNVNEVIFAGGVSASKYILRELSMK
LRKKHIEAYFTEPQYSTDNAVGCAIIGLNNFLGERV

Sequences:

>Translated_356_residues
MKLGNNIIIGIDTSCYTTSIAAISLDKKVIFNEKIMLEVRDNSKGLRQSEAVFQHINNLGILSDRIKSFKDKFNVEGVCS
SKKPRPVENSYMPVFNVGHNFGKLLSSIYGCRFYETTHQENHIEASLLNSKLKNNNKFISVHMSGGTTEILLTSKQDSHH
NVCDTNLGKIAKISIKKDDKSKLYNNFGYNIDIIGGSKDISFGQLIDRVGIKLGYKFPSGKYLDENALNCNLKIESGLKT
SVRDGYMNLSGLENQVNKIINDNGDNTNQKEYISKLVLDSVVRNMFKSLVYLCETYNVNEVIFAGGVSASKYILRELSMK
LRKKHIEAYFTEPQYSTDNAVGCAIIGLNNFLGERV
>Mature_356_residues
MKLGNNIIIGIDTSCYTTSIAAISLDKKVIFNEKIMLEVRDNSKGLRQSEAVFQHINNLGILSDRIKSFKDKFNVEGVCS
SKKPRPVENSYMPVFNVGHNFGKLLSSIYGCRFYETTHQENHIEASLLNSKLKNNNKFISVHMSGGTTEILLTSKQDSHH
NVCDTNLGKIAKISIKKDDKSKLYNNFGYNIDIIGGSKDISFGQLIDRVGIKLGYKFPSGKYLDENALNCNLKIESGLKT
SVRDGYMNLSGLENQVNKIINDNGDNTNQKEYISKLVLDSVVRNMFKSLVYLCETYNVNEVIFAGGVSASKYILRELSMK
LRKKHIEAYFTEPQYSTDNAVGCAIIGLNNFLGERV

Specific function: Could Be A Metalloprotease. [C]

COG id: COG0533

COG function: function code O; Metal-dependent proteases with possible chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

Organism=Escherichia coli, GI1789445, Length=350, Percent_Identity=21.4285714285714, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022450
- InterPro:   IPR000905
- InterPro:   IPR017860
- InterPro:   IPR017861 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: =3.4.24.57 [H]

Molecular weight: Translated: 39906; Mature: 39906

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLGNNIIIGIDTSCYTTSIAAISLDKKVIFNEKIMLEVRDNSKGLRQSEAVFQHINNLG
CCCCCEEEEEECCCHHHHEEEEEECCCEEEECCEEEEEECCCCCCCHHHHHHHHHHHCCC
ILSDRIKSFKDKFNVEGVCSSKKPRPVENSYMPVFNVGHNFGKLLSSIYGCRFYETTHQE
HHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEECCCHHHHHHHHHHCCEEEECCCCC
NHIEASLLNSKLKNNNKFISVHMSGGTTEILLTSKQDSHHNVCDTNLGKIAKISIKKDDK
CCHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCHH
SKLYNNFGYNIDIIGGSKDISFGQLIDRVGIKLGYKFPSGKYLDENALNCNLKIESGLKT
HHHHHCCCCEEEEECCCCCCHHHHHHHHHCCEEEEECCCCCCCCCCCCEEEEEECCCCCC
SVRDGYMNLSGLENQVNKIINDNGDNTNQKEYISKLVLDSVVRNMFKSLVYLCETYNVNE
HHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
VIFAGGVSASKYILRELSMKLRKKHIEAYFTEPQYSTDNAVGCAIIGLNNFLGERV
EEEECCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEEECHHHHCCCC
>Mature Secondary Structure
MKLGNNIIIGIDTSCYTTSIAAISLDKKVIFNEKIMLEVRDNSKGLRQSEAVFQHINNLG
CCCCCEEEEEECCCHHHHEEEEEECCCEEEECCEEEEEECCCCCCCHHHHHHHHHHHCCC
ILSDRIKSFKDKFNVEGVCSSKKPRPVENSYMPVFNVGHNFGKLLSSIYGCRFYETTHQE
HHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEECCCHHHHHHHHHHCCEEEECCCCC
NHIEASLLNSKLKNNNKFISVHMSGGTTEILLTSKQDSHHNVCDTNLGKIAKISIKKDDK
CCHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCHH
SKLYNNFGYNIDIIGGSKDISFGQLIDRVGIKLGYKFPSGKYLDENALNCNLKIESGLKT
HHHHHCCCCEEEEECCCCCCHHHHHHHHHCCEEEEECCCCCCCCCCCCEEEEEECCCCCC
SVRDGYMNLSGLENQVNKIINDNGDNTNQKEYISKLVLDSVVRNMFKSLVYLCETYNVNE
HHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
VIFAGGVSASKYILRELSMKLRKKHIEAYFTEPQYSTDNAVGCAIIGLNNFLGERV
EEEECCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEEECHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA