| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is ackA
Identifier: 126698770
GI number: 126698770
Start: 1375461
End: 1376657
Strand: Direct
Name: ackA
Synonym: CD1175
Alternate gene names: 126698770
Gene position: 1375461-1376657 (Clockwise)
Preceding gene: 126698768
Following gene: 126698771
Centisome position: 32.06
GC content: 32.41
Gene sequence:
>1197_bases ATGAAAATATTAGTATTAAACTGTGGGAGTTCTTCATTAAAATATCAATTAATAGATATGAATAATGAAGAAGTTTTATG TATAGGATTGGTTGAAAGAATAGGAATAGAAGGTTCTATATTAAAACATGAAAAAGCAGGTAGAGATGATAAATACGTTG TTGAACAACCAATGAAGGACCACAAAGATGCAATAGCATTAGTTTTAGAAGCTGTTGCTCATCCAGAATTTGGTGCAGTT AAAGAAATGAAAGAAATAGATGCAGTAGGACATAGAGTTGTACATGCTGGAGAAAAATTTGCAACTTCAGTAGTAATAAC TCCAGAAGTAGAAGAAGCTTTAAAAGAATGTATAGATTTAGCTCCACTTCATAATCCAGCAAACATAATGGGAATAGATG CTTGTAAAGCTATACTTCCAGATGTACCAATGGTAGGTGTATTTGATACTGCTTTCCATCAAACAATGCCTAAATCTTCA TACTTATATGGTTTACCTCATGAGCTATATACTAAATATGGGGTAAGAAGATATGGATTCCACGGAACTTCTCATAATTA TGTATCTCAAAGAGCAGCAGAGATATTAGGAAAAGATATAAAAGATTTAAAAATAGTAACTTGTCACTTAGGAAATGGTG CTTCTATAGCTGCTGTTGATGGTGGAAAATGTGTAGATACATCTATGGGATTCACTCCATTAGAAGGATTAATAATGGGA ACTAGATGTGGAGATATAGACCCAGCTATATTACCATTCTTAATGAGAAAAGAAGGTTTAGATGCTGATGGATTGGATAA ATTAATGAATAAAGAATCTGGAGTATATGGAATGACTGGAATTTCTAGTGACTTCAGAGATATAGAAGATGCAGCTAAAA ATGGAGACGAAAGAGCTCAAGCTACATTAGAAGCGTATGTTAAAAAAGTACAAAAATATATAGGCGCTTATGCTGCTGAA ATGAATGGATTGGATGTTGTAGTATTTACTGCAGGCGTTGGTGAAAATGGAAAGGCTATAAGAGCAGATATTGCTTCTAA CATGGAGTTTTTAGGAATGAAATTAGATAAAGAAGCTAATGATGTTAGAGGAAAAGAAACAGTAATATCTACTGCTGATT CTAAAGTAAAAATGCTTTTAATACCAACTAATGAAGAATTAATGATAGCTAGAGATACATTAAGATTGGTAAAATAA
Upstream 100 bases:
>100_bases CTATAACAAAATAATAAAAGATAGAGTTTTATTTAGACATTTATTACAAATCAAAATTTATTACATATTATTTATAAAAA AATCTAAGGAGGAAATAATA
Downstream 100 bases:
>100_bases TTAAATTAAACCTATGCCTATCAAGTAAAAATACTTGACAAACAAATGCTAGATTTGTATAATAAATTTGGTGATATGTT GAGGTGAACTTAATGAAAGT
Product: acetate kinase
Products: NA
Alternate protein names: Acetokinase
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MKILVLNCGSSSLKYQLIDMNNEEVLCIGLVERIGIEGSILKHEKAGRDDKYVVEQPMKDHKDAIALVLEAVAHPEFGAV KEMKEIDAVGHRVVHAGEKFATSVVITPEVEEALKECIDLAPLHNPANIMGIDACKAILPDVPMVGVFDTAFHQTMPKSS YLYGLPHELYTKYGVRRYGFHGTSHNYVSQRAAEILGKDIKDLKIVTCHLGNGASIAAVDGGKCVDTSMGFTPLEGLIMG TRCGDIDPAILPFLMRKEGLDADGLDKLMNKESGVYGMTGISSDFRDIEDAAKNGDERAQATLEAYVKKVQKYIGAYAAE MNGLDVVVFTAGVGENGKAIRADIASNMEFLGMKLDKEANDVRGKETVISTADSKVKMLLIPTNEELMIARDTLRLVK
Sequences:
>Translated_398_residues MKILVLNCGSSSLKYQLIDMNNEEVLCIGLVERIGIEGSILKHEKAGRDDKYVVEQPMKDHKDAIALVLEAVAHPEFGAV KEMKEIDAVGHRVVHAGEKFATSVVITPEVEEALKECIDLAPLHNPANIMGIDACKAILPDVPMVGVFDTAFHQTMPKSS YLYGLPHELYTKYGVRRYGFHGTSHNYVSQRAAEILGKDIKDLKIVTCHLGNGASIAAVDGGKCVDTSMGFTPLEGLIMG TRCGDIDPAILPFLMRKEGLDADGLDKLMNKESGVYGMTGISSDFRDIEDAAKNGDERAQATLEAYVKKVQKYIGAYAAE MNGLDVVVFTAGVGENGKAIRADIASNMEFLGMKLDKEANDVRGKETVISTADSKVKMLLIPTNEELMIARDTLRLVK >Mature_398_residues MKILVLNCGSSSLKYQLIDMNNEEVLCIGLVERIGIEGSILKHEKAGRDDKYVVEQPMKDHKDAIALVLEAVAHPEFGAV KEMKEIDAVGHRVVHAGEKFATSVVITPEVEEALKECIDLAPLHNPANIMGIDACKAILPDVPMVGVFDTAFHQTMPKSS YLYGLPHELYTKYGVRRYGFHGTSHNYVSQRAAEILGKDIKDLKIVTCHLGNGASIAAVDGGKCVDTSMGFTPLEGLIMG TRCGDIDPAILPFLMRKEGLDADGLDKLMNKESGVYGMTGISSDFRDIEDAAKNGDERAQATLEAYVKKVQKYIGAYAAE MNGLDVVVFTAGVGENGKAIRADIASNMEFLGMKLDKEANDVRGKETVISTADSKVKMLLIPTNEELMIARDTLRLVK
Specific function: Involved In The Activation Of Acetate To Acetyl CoA And The Secretion Of Acetate. During Anaerobic Growth Of The Organism, This Enzyme Is Also Involved In The Synthesis Of Most Of The ATP Formed Catabolically. [C]
COG id: COG0282
COG function: function code C; Acetate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetokinase family
Homologues:
Organism=Escherichia coli, GI1788633, Length=402, Percent_Identity=45.5223880597015, Blast_Score=341, Evalue=5e-95, Organism=Escherichia coli, GI145693184, Length=399, Percent_Identity=41.8546365914787, Blast_Score=322, Evalue=3e-89,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): ACKA_CLOD6 (Q18B36)
Other databases:
- EMBL: AM180355 - RefSeq: YP_001087667.1 - ProteinModelPortal: Q18B36 - SMR: Q18B36 - STRING: Q18B36 - GeneID: 4916377 - GenomeReviews: AM180355_GR - KEGG: cdf:CD1175 - NMPDR: fig|1496.1.peg.221 - eggNOG: COG0282 - HOGENOM: HBG285863 - OMA: TDEEYMI - ProtClustDB: CLSK2534720 - GO: GO:0005737 - HAMAP: MF_00020 - InterPro: IPR000890 - InterPro: IPR004372 - PANTHER: PTHR21060 - PANTHER: PTHR21060:SF11 - PIRSF: PIRSF000722 - PRINTS: PR00471 - TIGRFAMs: TIGR00016
Pfam domain/function: PF00871 Acetate_kinase
EC number: =2.7.2.1
Molecular weight: Translated: 43321; Mature: 43321
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: PS01075 ACETATE_KINASE_1; PS01076 ACETATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILVLNCGSSSLKYQLIDMNNEEVLCIGLVERIGIEGSILKHEKAGRDDKYVVEQPMKD CEEEEEECCCCCEEEEEEECCCCCEEEEEEHHHHCCCCCEECHHHCCCCCCHHHHCCHHH HKDAIALVLEAVAHPEFGAVKEMKEIDAVGHRVVHAGEKFATSVVITPEVEEALKECIDL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHEEEEEECCHHHHHHHHHHHH APLHNPANIMGIDACKAILPDVPMVGVFDTAFHQTMPKSSYLYGLPHELYTKYGVRRYGF CCCCCCCCEEEHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEECCCHHHHHHHCCHHCCC HGTSHNYVSQRAAEILGKDIKDLKIVTCHLGNGASIAAVDGGKCVDTSMGFTPLEGLIMG CCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCEEECCCCCCCCCCEEEE TRCGDIDPAILPFLMRKEGLDADGLDKLMNKESGVYGMTGISSDFRDIEDAAKNGDERAQ CCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEECCCCCHHHHHHHHHCCCHHHHH ATLEAYVKKVQKYIGAYAAEMNGLDVVVFTAGVGENGKAIRADIASNMEFLGMKLDKEAN HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEHHHHCCHHHCCEECCCCCH DVRGKETVISTADSKVKMLLIPTNEELMIARDTLRLVK HCCCCHHEEECCCCCEEEEEEECCCCEEEEHHHHHHCC >Mature Secondary Structure MKILVLNCGSSSLKYQLIDMNNEEVLCIGLVERIGIEGSILKHEKAGRDDKYVVEQPMKD CEEEEEECCCCCEEEEEEECCCCCEEEEEEHHHHCCCCCEECHHHCCCCCCHHHHCCHHH HKDAIALVLEAVAHPEFGAVKEMKEIDAVGHRVVHAGEKFATSVVITPEVEEALKECIDL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHEEEEEECCHHHHHHHHHHHH APLHNPANIMGIDACKAILPDVPMVGVFDTAFHQTMPKSSYLYGLPHELYTKYGVRRYGF CCCCCCCCEEEHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEECCCHHHHHHHCCHHCCC HGTSHNYVSQRAAEILGKDIKDLKIVTCHLGNGASIAAVDGGKCVDTSMGFTPLEGLIMG CCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCEEECCCCCCCCCCEEEE TRCGDIDPAILPFLMRKEGLDADGLDKLMNKESGVYGMTGISSDFRDIEDAAKNGDERAQ CCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEECCCCCHHHHHHHHHCCCHHHHH ATLEAYVKKVQKYIGAYAAEMNGLDVVVFTAGVGENGKAIRADIASNMEFLGMKLDKEAN HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEHHHHCCHHHCCEECCCCCH DVRGKETVISTADSKVKMLLIPTNEELMIARDTLRLVK HCCCCHHEEECCCCCEEEEEEECCCCEEEEHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA