Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698754

Identifier: 126698754

GI number: 126698754

Start: 1358977

End: 1359678

Strand: Direct

Name: 126698754

Synonym: CD1159

Alternate gene names: NA

Gene position: 1358977-1359678 (Clockwise)

Preceding gene: 126698753

Following gene: 126698755

Centisome position: 31.68

GC content: 28.77

Gene sequence:

>702_bases
ATGAGTAAGATAATAAGAGTAAAATTTAAAAAGGAAGGCGACATGATATATATATCACATCTTGACCTTCAGAGATTGTT
ACAAAGAGCGTTTAGAAGAGCTGAAATAAACTTATCACATTCTCAAGGATTTAATCCTCACCCTAAAATGAGTTATGGCA
ATGCTTTGGCTTTAGGGACAGAAAGTCAAGGTGAGTATGTAGATATTGAAATAGAAGAAGATGATTTATCAGTAGAGGAA
TTTTTAAATAAAGTATCAATTCAACTTCCAGATGGGATAGATTTTATCAAAGCAAAAGAAATTGATAGACAAACACCTTC
TCTTTCTTCTGTGATAGACTATGGAGAATATTTGTTTAATATAGATTTGAAAAGACCTATGACGAAAGAGTTTGTAAAAA
GAAAAGTAATTGACTTTATGAATAATAAAGAAATAATCATAACAAAAAAGAATAAAAAAGGTAAGATGGTTGAAGTAGAT
ATAAGACCTATGATAAGAACCTTTGATGTTTTAAATTTAGAAGATGAACATATTACTCTTACTGCTACTATAGCTACAGG
CTCAAAAACTAATTTAAATACTAATATACTTATACCAAAGATATTAGAGATGTTTGAACTTGATATTGACCCATTAGATG
TTGATATATTGAGAAGAGATTTATATGTATTAGAAGATGGGGAATTAGTGACTCCTATGTAA

Upstream 100 bases:

>100_bases
GACGAAAATGCTAAAAAAGAAAAAATCACTTCTGATTGTAGACATAACTGCAATGGTTGTGGAATAAATATACATGATAT
AGGAAGGGGGCTTTGCTAAT

Downstream 100 bases:

>100_bases
GCTCGAGAGGTGAAGTTGTGAAAAAGATAGTTATTGAGTCCCTAATAGGGTCCCAGAAAACAGCAGTACTTGAAGATGAA
AGATTAACAGAACTTTTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: Radical Sam Protein; Fe-S Oxidoreductase; Radical SAM Family Protein; Radical SAM Domain-Containing Protein

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MSKIIRVKFKKEGDMIYISHLDLQRLLQRAFRRAEINLSHSQGFNPHPKMSYGNALALGTESQGEYVDIEIEEDDLSVEE
FLNKVSIQLPDGIDFIKAKEIDRQTPSLSSVIDYGEYLFNIDLKRPMTKEFVKRKVIDFMNNKEIIITKKNKKGKMVEVD
IRPMIRTFDVLNLEDEHITLTATIATGSKTNLNTNILIPKILEMFELDIDPLDVDILRRDLYVLEDGELVTPM

Sequences:

>Translated_233_residues
MSKIIRVKFKKEGDMIYISHLDLQRLLQRAFRRAEINLSHSQGFNPHPKMSYGNALALGTESQGEYVDIEIEEDDLSVEE
FLNKVSIQLPDGIDFIKAKEIDRQTPSLSSVIDYGEYLFNIDLKRPMTKEFVKRKVIDFMNNKEIIITKKNKKGKMVEVD
IRPMIRTFDVLNLEDEHITLTATIATGSKTNLNTNILIPKILEMFELDIDPLDVDILRRDLYVLEDGELVTPM
>Mature_232_residues
SKIIRVKFKKEGDMIYISHLDLQRLLQRAFRRAEINLSHSQGFNPHPKMSYGNALALGTESQGEYVDIEIEEDDLSVEEF
LNKVSIQLPDGIDFIKAKEIDRQTPSLSSVIDYGEYLFNIDLKRPMTKEFVKRKVIDFMNNKEIIITKKNKKGKMVEVDI
RPMIRTFDVLNLEDEHITLTATIATGSKTNLNTNILIPKILEMFELDIDPLDVDILRRDLYVLEDGELVTPM

Specific function: Unknown

COG id: COG5011

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26919; Mature: 26787

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIIRVKFKKEGDMIYISHLDLQRLLQRAFRRAEINLSHSQGFNPHPKMSYGNALALGT
CCCEEEEEEECCCCEEEEECCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCEEEECC
ESQGEYVDIEIEEDDLSVEEFLNKVSIQLPDGIDFIKAKEIDRQTPSLSSVIDYGEYLFN
CCCCCEEEEEEECCCCCHHHHHHHEEEECCCCCCCHHHHHHCCCCCCHHHHHHHCCEEEE
IDLKRPMTKEFVKRKVIDFMNNKEIIITKKNKKGKMVEVDIRPMIRTFDVLNLEDEHITL
EECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCHHHHHEEEECCCCCEEEE
TATIATGSKTNLNTNILIPKILEMFELDIDPLDVDILRRDLYVLEDGELVTPM
EEEEECCCCCCCCCEEEHHHHHHHHHCCCCCCCHHHHHCEEEEEECCCEECCC
>Mature Secondary Structure 
SKIIRVKFKKEGDMIYISHLDLQRLLQRAFRRAEINLSHSQGFNPHPKMSYGNALALGT
CCEEEEEEECCCCEEEEECCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCEEEECC
ESQGEYVDIEIEEDDLSVEEFLNKVSIQLPDGIDFIKAKEIDRQTPSLSSVIDYGEYLFN
CCCCCEEEEEEECCCCCHHHHHHHEEEECCCCCCCHHHHHHCCCCCCHHHHHHHCCEEEE
IDLKRPMTKEFVKRKVIDFMNNKEIIITKKNKKGKMVEVDIRPMIRTFDVLNLEDEHITL
EECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCHHHHHEEEECCCCCEEEE
TATIATGSKTNLNTNILIPKILEMFELDIDPLDVDILRRDLYVLEDGELVTPM
EEEEECCCCCCCCCEEEHHHHHHHHHCCCCCCCHHHHHCEEEEEECCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA