| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is maf [C]
Identifier: 126698738
GI number: 126698738
Start: 1341765
End: 1342349
Strand: Direct
Name: maf [C]
Synonym: CD1143
Alternate gene names: 126698738
Gene position: 1341765-1342349 (Clockwise)
Preceding gene: 126698737
Following gene: 126698739
Centisome position: 31.27
GC content: 30.94
Gene sequence:
>585_bases ATGAATATAATCTTGGCATCAGCCTCTCCAAGAAGGAAAGAAATTCTAGAGAATACGAATGTAAGATTTGATATAATTAA AAATGAAATTGATGAGATTATATTGGAAGGTGAAACACCAAAACATTTAGTTATGAGATTAGCTTTTGAAAAAAGTATGT CTGTAGCATCTGAACATAATGAAGATGTTGTTATTGGAGCTGATACAGTTGTTGTTTTAGACAATGCTATTTTAGGAAAA CCAAAAGATGAGTCTTGTGCAAGAGATATGTTAAAAAGACTATCTGGAAGAGAGCATCAAGTCATAACAGGTATTAGCTT AATAAACTTGTGCGAAGATAAAAAGGTAATTGACTATGTAATCAGCAATGTGAAATTTAAAACGTTATCAGAGCAGGATA TTGAGGATTATCTGAAAACTAATGAGTCATTTGACAAAGCAGGAGCCTATGGTATACAAGGTTATGGAGCTTTGTTAGTT GAAGAAATTAGAGGAGATTATTTTAATATAGTTGGTCTTCCAATTTCAAGGTTAGGCGACCTATTAAAAAAATATTTTAG TATAAATCTTTTTTATGGAGTGTGA
Upstream 100 bases:
>100_bases AACAATAGTGTAACAAAAAAGGTTCGACATTTCTGTTGAATTTTTTACAATATAGTGATAGACTAAATAGGTACAAATTA CGTACAAATGAGGTGAATAA
Downstream 100 bases:
>100_bases TTTATCTGAAAAAGTCATTTAATTCAACCATTAAGGTAAAAGAGATGGCACCAGAGGAAAGACCCAGAGAAAAGATGCTT GCCAAAGGCGTAAAAAGCTT
Product: septum formation protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MNIILASASPRRKEILENTNVRFDIIKNEIDEIILEGETPKHLVMRLAFEKSMSVASEHNEDVVIGADTVVVLDNAILGK PKDESCARDMLKRLSGREHQVITGISLINLCEDKKVIDYVISNVKFKTLSEQDIEDYLKTNESFDKAGAYGIQGYGALLV EEIRGDYFNIVGLPISRLGDLLKKYFSINLFYGV
Sequences:
>Translated_194_residues MNIILASASPRRKEILENTNVRFDIIKNEIDEIILEGETPKHLVMRLAFEKSMSVASEHNEDVVIGADTVVVLDNAILGK PKDESCARDMLKRLSGREHQVITGISLINLCEDKKVIDYVISNVKFKTLSEQDIEDYLKTNESFDKAGAYGIQGYGALLV EEIRGDYFNIVGLPISRLGDLLKKYFSINLFYGV >Mature_194_residues MNIILASASPRRKEILENTNVRFDIIKNEIDEIILEGETPKHLVMRLAFEKSMSVASEHNEDVVIGADTVVVLDNAILGK PKDESCARDMLKRLSGREHQVITGISLINLCEDKKVIDYVISNVKFKTLSEQDIEDYLKTNESFDKAGAYGIQGYGALLV EEIRGDYFNIVGLPISRLGDLLKKYFSINLFYGV
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family
Homologues:
Organism=Homo sapiens, GI117553627, Length=199, Percent_Identity=40.2010050251256, Blast_Score=147, Evalue=7e-36, Organism=Homo sapiens, GI291045183, Length=193, Percent_Identity=37.3056994818653, Blast_Score=128, Evalue=4e-30, Organism=Homo sapiens, GI291045181, Length=155, Percent_Identity=40.6451612903226, Blast_Score=114, Evalue=5e-26, Organism=Homo sapiens, GI310133124, Length=133, Percent_Identity=43.609022556391, Blast_Score=113, Evalue=1e-25, Organism=Escherichia coli, GI1789646, Length=190, Percent_Identity=39.4736842105263, Blast_Score=145, Evalue=2e-36, Organism=Escherichia coli, GI87081830, Length=183, Percent_Identity=36.6120218579235, Blast_Score=122, Evalue=1e-29, Organism=Caenorhabditis elegans, GI193202443, Length=188, Percent_Identity=35.1063829787234, Blast_Score=95, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6324685, Length=202, Percent_Identity=26.7326732673267, Blast_Score=63, Evalue=2e-11, Organism=Drosophila melanogaster, GI78706856, Length=193, Percent_Identity=35.2331606217617, Blast_Score=100, Evalue=8e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1143_CLOD6 (Q18B07)
Other databases:
- EMBL: AM180355 - RefSeq: YP_001087635.1 - ProteinModelPortal: Q18B07 - SMR: Q18B07 - STRING: Q18B07 - GeneID: 4916295 - GenomeReviews: AM180355_GR - KEGG: cdf:CD1143 - NMPDR: fig|1496.1.peg.253 - eggNOG: COG0424 - HOGENOM: HBG414045 - OMA: VVGLPLC - ProtClustDB: CLSK2534702 - GO: GO:0005737 - HAMAP: MF_00528 - InterPro: IPR003697 - PIRSF: PIRSF006305 - TIGRFAMs: TIGR00172
Pfam domain/function: PF02545 Maf
EC number: NA
Molecular weight: Translated: 21813; Mature: 21813
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: ACT_SITE 32-32
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIILASASPRRKEILENTNVRFDIIKNEIDEIILEGETPKHLVMRLAFEKSMSVASEHN CEEEEECCCCHHHHHHHCCCCEEEEHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHCCC EDVVIGADTVVVLDNAILGKPKDESCARDMLKRLSGREHQVITGISLINLCEDKKVIDYV CCEEEECCEEEEECCHHCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCHHHHHHH ISNVKFKTLSEQDIEDYLKTNESFDKAGAYGIQGYGALLVEEIRGDYFNIVGLPISRLGD HHCCEEECCCHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHH LLKKYFSINLFYGV HHHHHHHHEEEECC >Mature Secondary Structure MNIILASASPRRKEILENTNVRFDIIKNEIDEIILEGETPKHLVMRLAFEKSMSVASEHN CEEEEECCCCHHHHHHHCCCCEEEEHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHCCC EDVVIGADTVVVLDNAILGKPKDESCARDMLKRLSGREHQVITGISLINLCEDKKVIDYV CCEEEECCEEEEECCHHCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCHHHHHHH ISNVKFKTLSEQDIEDYLKTNESFDKAGAYGIQGYGALLVEEIRGDYFNIVGLPISRLGD HHCCEEECCCHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHH LLKKYFSINLFYGV HHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA