Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698730

Identifier: 126698730

GI number: 126698730

Start: 1335296

End: 1336240

Strand: Direct

Name: 126698730

Synonym: CD1136

Alternate gene names: NA

Gene position: 1335296-1336240 (Clockwise)

Preceding gene: 126698729

Following gene: 126698731

Centisome position: 31.12

GC content: 26.88

Gene sequence:

>945_bases
ATGAATAGAAGAAAAACGATATACAGAGGATTTAATAATAATAGACATAAGATTGATTTACGTAAATATGTTATAACGAT
TGCTTGCTTGTGTCTAATTGGCTATTATTCTTATACAAAAATAAAAGATAGTAAGATATTGGAGTATGTATCGGCTAAAA
TACCATTTCTAAATAATTCATCAGATATAACTTATAAAGATATATCTGATGAATTAAATTCAATAAAAAAAGGGAAAAAA
TCTAAATCACAAACCAATTCAGATGATAAACAAGAAACTAATCCAGAAAAAGCGGTAAATAACACTAAAGAGCCAGAAGA
AGTCAAGTTAGCTACTATAGAAGGCTGGGATATGTATACTATTCAAGTTGCTGCAATAGATAATAATGATGATTTGAAAA
AAATACAGACATCATTAGTTAATAATGACATACCTTTTTCAGTTATGGAGAAGGATGGAGTAAAAAAAATACAAACCTAT
TCCTCTTTTGATGAAAATGATGTTAGAAAGCAGATAAGCAGTGTAAGAAAGGTGTTTCCAGATGCATTTTTATCACACTT
AGATGCACCTATGTTGTCTTTAGAGTATACAAGTAACTACGCTTATATAGAGAGTATATCTAAAGAATTAAATAAATTAA
TAACAAACTTTAAAGAAGAATCAAGTTTTTGGTCGAATGCTGAAAATAATGTAGATATGGAAAAATATAATACTATTTTG
ACAAATAGAAAGGCAATATCACAAAATATATCAAAAGAAGCTGAAAAGATTGACTATTCTGAAATGCGTTTATTTAAAGA
TAATTTAATAGAGTATGTAAAGAATGTGAATGAAAAAATTGATACAGCTTCAAAAGCAGCAAATGAAGAAAAATATAGTG
TAAGTAAAAGTCTGCTTTTATCATCCATGCAGGAGTACTCTATGTTTATAAATTCTATAAAATAA

Upstream 100 bases:

>100_bases
TTCTTATTAAAAAATTAGAAGAAATAATTATTTATATTCATAAATTGTGACTCTTAAAAATATACTTTATTAATAATATA
ATTTTGGGAGGGACAAACTA

Downstream 100 bases:

>100_bases
AATACAGAAAATTTGGACTTTAGAAAGCTATATGAAAAGGATTGTTTAATTAAGCAATCCTTTTCCTCGATTTGACTTAA
TATAGAGGTATTGATTTATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MNRRKTIYRGFNNNRHKIDLRKYVITIACLCLIGYYSYTKIKDSKILEYVSAKIPFLNNSSDITYKDISDELNSIKKGKK
SKSQTNSDDKQETNPEKAVNNTKEPEEVKLATIEGWDMYTIQVAAIDNNDDLKKIQTSLVNNDIPFSVMEKDGVKKIQTY
SSFDENDVRKQISSVRKVFPDAFLSHLDAPMLSLEYTSNYAYIESISKELNKLITNFKEESSFWSNAENNVDMEKYNTIL
TNRKAISQNISKEAEKIDYSEMRLFKDNLIEYVKNVNEKIDTASKAANEEKYSVSKSLLLSSMQEYSMFINSIK

Sequences:

>Translated_314_residues
MNRRKTIYRGFNNNRHKIDLRKYVITIACLCLIGYYSYTKIKDSKILEYVSAKIPFLNNSSDITYKDISDELNSIKKGKK
SKSQTNSDDKQETNPEKAVNNTKEPEEVKLATIEGWDMYTIQVAAIDNNDDLKKIQTSLVNNDIPFSVMEKDGVKKIQTY
SSFDENDVRKQISSVRKVFPDAFLSHLDAPMLSLEYTSNYAYIESISKELNKLITNFKEESSFWSNAENNVDMEKYNTIL
TNRKAISQNISKEAEKIDYSEMRLFKDNLIEYVKNVNEKIDTASKAANEEKYSVSKSLLLSSMQEYSMFINSIK
>Mature_314_residues
MNRRKTIYRGFNNNRHKIDLRKYVITIACLCLIGYYSYTKIKDSKILEYVSAKIPFLNNSSDITYKDISDELNSIKKGKK
SKSQTNSDDKQETNPEKAVNNTKEPEEVKLATIEGWDMYTIQVAAIDNNDDLKKIQTSLVNNDIPFSVMEKDGVKKIQTY
SSFDENDVRKQISSVRKVFPDAFLSHLDAPMLSLEYTSNYAYIESISKELNKLITNFKEESSFWSNAENNVDMEKYNTIL
TNRKAISQNISKEAEKIDYSEMRLFKDNLIEYVKNVNEKIDTASKAANEEKYSVSKSLLLSSMQEYSMFINSIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36280; Mature: 36280

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRKTIYRGFNNNRHKIDLRKYVITIACLCLIGYYSYTKIKDSKILEYVSAKIPFLNNS
CCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC
SDITYKDISDELNSIKKGKKSKSQTNSDDKQETNPEKAVNNTKEPEEVKLATIEGWDMYT
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHHCCCCCCCCEEEEEECCCEEEE
IQVAAIDNNDDLKKIQTSLVNNDIPFSVMEKDGVKKIQTYSSFDENDVRKQISSVRKVFP
EEEEEECCCHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
DAFLSHLDAPMLSLEYTSNYAYIESISKELNKLITNFKEESSFWSNAENNVDMEKYNTIL
HHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
TNRKAISQNISKEAEKIDYSEMRLFKDNLIEYVKNVNEKIDTASKAANEEKYSVSKSLLL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
SSMQEYSMFINSIK
HHHHHHHHHHHHCC
>Mature Secondary Structure
MNRRKTIYRGFNNNRHKIDLRKYVITIACLCLIGYYSYTKIKDSKILEYVSAKIPFLNNS
CCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC
SDITYKDISDELNSIKKGKKSKSQTNSDDKQETNPEKAVNNTKEPEEVKLATIEGWDMYT
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHHCCCCCCCCEEEEEECCCEEEE
IQVAAIDNNDDLKKIQTSLVNNDIPFSVMEKDGVKKIQTYSSFDENDVRKQISSVRKVFP
EEEEEECCCHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
DAFLSHLDAPMLSLEYTSNYAYIESISKELNKLITNFKEESSFWSNAENNVDMEKYNTIL
HHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
TNRKAISQNISKEAEKIDYSEMRLFKDNLIEYVKNVNEKIDTASKAANEEKYSVSKSLLL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
SSMQEYSMFINSIK
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA