| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698727
Identifier: 126698727
GI number: 126698727
Start: 1332581
End: 1333180
Strand: Direct
Name: 126698727
Synonym: CD1133
Alternate gene names: NA
Gene position: 1332581-1333180 (Clockwise)
Preceding gene: 126698726
Following gene: 126698728
Centisome position: 31.06
GC content: 25.0
Gene sequence:
>600_bases ATGGAATCTAGGGGATATAAAGAGGATTTAAAAAAAATGATACTTGATATGGCCCACAAAGAACTTGAGAGTTATGTATC ACAAAAAGGAGCAAAAAAATACTTTGAAGGTAACTTGGATAAGATTATTAATAATAATATAAAAAAATTCAATCAAAGTA TTGGTCTTAATAGAGTATATTTAAAAATGTTAAAAAAGTGTGCATATCAAGAAAGTGTAACTTCAATATCAAGGACTATA AAGAAAGAAGCATTATTTAAATCAAAAAAAGAGCTATTTGCTTTTTCAGAGTACTTAAAACTTGATATTAACAAGCGACT TTCATATAATCAAATTTTAAGAAAAATATCAAGATATATATACTACAATAGAAGTTCATATGCTCAAAAATACGTTGTTT TCAAAAGAGGAGATGAAGAATATCTTTTAGAACCAGAGAAAATAAAAGATGAATTAATATCAAGCTATAGGTCAAAGACT AGAGAAGATATGAGGTCAATAGCAAAACTTTTGGATATAGAAGTAGAAGATGATTATAATGCTGAAGATATTAGAAAAAA AGTAATAAATTATATTATCAAAGAAAAACTTAAAAGTTAG
Upstream 100 bases:
>100_bases TTTTAAATTAATATATACATAAAAAGTAAAAAAATTTTGTAATGACTCACATTTCTTGAGCTTTTTGAATATACTATAAA TAGCTAAGGGAGGGAGTATC
Downstream 100 bases:
>100_bases AGTTTTAAAGAATAAGTTCTGCCAATTTGCATGATTAAGTATAACTTGGGTATAAATTTTTTATGCATTTGAAAGAGCTT ATTCTTTTTTTGACATATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MESRGYKEDLKKMILDMAHKELESYVSQKGAKKYFEGNLDKIINNNIKKFNQSIGLNRVYLKMLKKCAYQESVTSISRTI KKEALFKSKKELFAFSEYLKLDINKRLSYNQILRKISRYIYYNRSSYAQKYVVFKRGDEEYLLEPEKIKDELISSYRSKT REDMRSIAKLLDIEVEDDYNAEDIRKKVINYIIKEKLKS
Sequences:
>Translated_199_residues MESRGYKEDLKKMILDMAHKELESYVSQKGAKKYFEGNLDKIINNNIKKFNQSIGLNRVYLKMLKKCAYQESVTSISRTI KKEALFKSKKELFAFSEYLKLDINKRLSYNQILRKISRYIYYNRSSYAQKYVVFKRGDEEYLLEPEKIKDELISSYRSKT REDMRSIAKLLDIEVEDDYNAEDIRKKVINYIIKEKLKS >Mature_199_residues MESRGYKEDLKKMILDMAHKELESYVSQKGAKKYFEGNLDKIINNNIKKFNQSIGLNRVYLKMLKKCAYQESVTSISRTI KKEALFKSKKELFAFSEYLKLDINKRLSYNQILRKISRYIYYNRSSYAQKYVVFKRGDEEYLLEPEKIKDELISSYRSKT REDMRSIAKLLDIEVEDDYNAEDIRKKVINYIIKEKLKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23815; Mature: 23815
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESRGYKEDLKKMILDMAHKELESYVSQKGAKKYFEGNLDKIINNNIKKFNQSIGLNRVY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHH LKMLKKCAYQESVTSISRTIKKEALFKSKKELFAFSEYLKLDINKRLSYNQILRKISRYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH YYNRSSYAQKYVVFKRGDEEYLLEPEKIKDELISSYRSKTREDMRSIAKLLDIEVEDDYN HCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC AEDIRKKVINYIIKEKLKS HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MESRGYKEDLKKMILDMAHKELESYVSQKGAKKYFEGNLDKIINNNIKKFNQSIGLNRVY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHH LKMLKKCAYQESVTSISRTIKKEALFKSKKELFAFSEYLKLDINKRLSYNQILRKISRYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH YYNRSSYAQKYVVFKRGDEEYLLEPEKIKDELISSYRSKTREDMRSIAKLLDIEVEDDYN HCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC AEDIRKKVINYIIKEKLKS HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA