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The map label for this gene is rlx [H]

Identifier: 126698689

GI number: 126698689

Start: 1293051

End: 1294400

Strand: Direct

Name: rlx [H]

Synonym: CD1102

Alternate gene names: 126698689

Gene position: 1293051-1294400 (Clockwise)

Preceding gene: 126698688

Following gene: 126698690

Centisome position: 30.14

GC content: 47.56

Gene sequence:

>1350_bases
ATGGCGGTTACAAAGATTAAGCCTATTAAAAGCACGTTGAGCAAAGCCCTTGACTATATCCAAAACCCGGATAAAACAGA
CGGGAAAATGCTTGTGTCCTCTTTTGGGTGCAGCTATGAAACGGCAGATATTGAGTTTGGATTTACGCTTGCACAAGCCA
TAGAGAAAGGGAACAATCTCGCCCACCATTTGATACAGTCCTTTGAGCCGGGGGAAGTGGATTATGAGAAAGCCCACGAA
ATCGGGAAACAGCTTGCCGACGCGGTAACAAAGGGACAGCATGAATACGTCTTAACTACCCACATAGACAAAGGGCATAT
CCATAACCATATCATTTTTTGTGCGGTCAATTTTGTTGACTACCACAAATACAATTCCAATAAACGCAGCTACTATGGCA
TACGGAACATGAGCGATAAGCTGTGCCGGGAAAACGGGCTGTCCGTTGTCGTTCCGGGTAAGGGCAGCAAGGGAAAAAGC
TATGCAGAATATCAAGCGGAAAAGGTCGGTGCAAGTTGGAAAGGCAAGCTGAAAATTACCGTTGATACGCTTATCCCCCA
AGTGGCAAGTTTTGAAGAATTGTTGCAGCGGTTACAGGCAGCGGGCTATGAGATAAAGCCGGGAAAATATATCTCCTGCC
GCGCTCCGGGACAGGAACGGTTTACCCGCTTAAAAACCCTCGGTGCAGATTATACAGAGGAAGCAATCAAAGAACGGATA
GAGGGCAAGCGCACAAAGGCGGCGAAAGCTCCCAAAGAGCAGCGCGTCGTATCGCTGCTTATTGACATTGAAAACAGTAT
CAAGGCAGCGCAGAGCCGGGGCTATGAACAGTGGGCGAAAATCCATAATCTGAAACTGGCTGCAAAGACTATGAATTTCT
TGACAGAACATAAGATTGAGCAGTACGCAGATTTAGTCAGCCGGATTGAGGAAGTAAATGCGGAAAATGAAAAGACAGCA
GACGCATTAAAGAGCGTGGAGAAACGTCTTGCAAACATGGTGGTGCTGATGAAGCACGTTACCACCTACCAAAAGACAAA
ACCTGTCTATGAAGCATACCGCAGGGCAAAGGATAAGGACGCATACCGGGCAAAGCAGGAAAGCAGTCTGATACTCCATG
AAGCAGCGGCAAAGGCACTAAAAACGGCGGGCGTTTCCAAGCTCCCGAATGTCGCCGCGCTACAAGTAGACTATGAAAAG
CTCCGGGAACAGAAAGAAGCCCTTTACGCGGACTATGGCAAACTGAAAAAACAGGTCAAAGAGTACGACGTTATCAAACA
GAACATAGACAGCATTTTACGGCAGCCAAGAGAGCCGGAACGGGAAAAAGGGAAAGAACGCGGGGAGTAG

Upstream 100 bases:

>100_bases
AAATCGGGGTCAATATCAATCAGATTGCAAAGCGTGTCAACGCGACAGGCAGCGTCTACCAAGAGGACATAGAGGAAATA
AAGGGGGTGCTTGCGGAGAT

Downstream 100 bases:

>100_bases
CTTTGTTCATACTTGTGTGATATAATAGTTCCTATCAAAGACAGTAGCCACATACTAAAGTGATACATTTTCAGCAAAGG
AAGTGTCAGAAAATGGAACA

Product: mobilization protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 449; Mature: 448

Protein sequence:

>449_residues
MAVTKIKPIKSTLSKALDYIQNPDKTDGKMLVSSFGCSYETADIEFGFTLAQAIEKGNNLAHHLIQSFEPGEVDYEKAHE
IGKQLADAVTKGQHEYVLTTHIDKGHIHNHIIFCAVNFVDYHKYNSNKRSYYGIRNMSDKLCRENGLSVVVPGKGSKGKS
YAEYQAEKVGASWKGKLKITVDTLIPQVASFEELLQRLQAAGYEIKPGKYISCRAPGQERFTRLKTLGADYTEEAIKERI
EGKRTKAAKAPKEQRVVSLLIDIENSIKAAQSRGYEQWAKIHNLKLAAKTMNFLTEHKIEQYADLVSRIEEVNAENEKTA
DALKSVEKRLANMVVLMKHVTTYQKTKPVYEAYRRAKDKDAYRAKQESSLILHEAAAKALKTAGVSKLPNVAALQVDYEK
LREQKEALYADYGKLKKQVKEYDVIKQNIDSILRQPREPEREKGKERGE

Sequences:

>Translated_449_residues
MAVTKIKPIKSTLSKALDYIQNPDKTDGKMLVSSFGCSYETADIEFGFTLAQAIEKGNNLAHHLIQSFEPGEVDYEKAHE
IGKQLADAVTKGQHEYVLTTHIDKGHIHNHIIFCAVNFVDYHKYNSNKRSYYGIRNMSDKLCRENGLSVVVPGKGSKGKS
YAEYQAEKVGASWKGKLKITVDTLIPQVASFEELLQRLQAAGYEIKPGKYISCRAPGQERFTRLKTLGADYTEEAIKERI
EGKRTKAAKAPKEQRVVSLLIDIENSIKAAQSRGYEQWAKIHNLKLAAKTMNFLTEHKIEQYADLVSRIEEVNAENEKTA
DALKSVEKRLANMVVLMKHVTTYQKTKPVYEAYRRAKDKDAYRAKQESSLILHEAAAKALKTAGVSKLPNVAALQVDYEK
LREQKEALYADYGKLKKQVKEYDVIKQNIDSILRQPREPEREKGKERGE
>Mature_448_residues
AVTKIKPIKSTLSKALDYIQNPDKTDGKMLVSSFGCSYETADIEFGFTLAQAIEKGNNLAHHLIQSFEPGEVDYEKAHEI
GKQLADAVTKGQHEYVLTTHIDKGHIHNHIIFCAVNFVDYHKYNSNKRSYYGIRNMSDKLCRENGLSVVVPGKGSKGKSY
AEYQAEKVGASWKGKLKITVDTLIPQVASFEELLQRLQAAGYEIKPGKYISCRAPGQERFTRLKTLGADYTEEAIKERIE
GKRTKAAKAPKEQRVVSLLIDIENSIKAAQSRGYEQWAKIHNLKLAAKTMNFLTEHKIEQYADLVSRIEEVNAENEKTAD
ALKSVEKRLANMVVLMKHVTTYQKTKPVYEAYRRAKDKDAYRAKQESSLILHEAAAKALKTAGVSKLPNVAALQVDYEKL
REQKEALYADYGKLKKQVKEYDVIKQNIDSILRQPREPEREKGKERGE

Specific function: This protein is probably required for relaxation complex formation and plasmid mobilization by conjugative plasmids [H]

COG id: COG3843

COG function: function code U; Type IV secretory pathway, VirD2 components (relaxase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005094 [H]

Pfam domain/function: PF03432 Relaxase [H]

EC number: NA

Molecular weight: Translated: 50816; Mature: 50684

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVTKIKPIKSTLSKALDYIQNPDKTDGKMLVSSFGCSYETADIEFGFTLAQAIEKGNNL
CCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHH
AHHLIQSFEPGEVDYEKAHEIGKQLADAVTKGQHEYVLTTHIDKGHIHNHIIFCAVNFVD
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEEHHHH
YHKYNSNKRSYYGIRNMSDKLCRENGLSVVVPGKGSKGKSYAEYQAEKVGASWKGKLKIT
HHHCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEE
VDTLIPQVASFEELLQRLQAAGYEIKPGKYISCRAPGQERFTRLKTLGADYTEEAIKERI
HHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHH
EGKRTKAAKAPKEQRVVSLLIDIENSIKAAQSRGYEQWAKIHNLKLAAKTMNFLTEHKIE
CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QYADLVSRIEEVNAENEKTADALKSVEKRLANMVVLMKHVTTYQKTKPVYEAYRRAKDKD
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHH
AYRAKQESSLILHEAAAKALKTAGVSKLPNVAALQVDYEKLREQKEALYADYGKLKKQVK
HHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHH
EYDVIKQNIDSILRQPREPEREKGKERGE
HHHHHHHHHHHHHHCCCCCHHHCCCCCCC
>Mature Secondary Structure 
AVTKIKPIKSTLSKALDYIQNPDKTDGKMLVSSFGCSYETADIEFGFTLAQAIEKGNNL
CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHH
AHHLIQSFEPGEVDYEKAHEIGKQLADAVTKGQHEYVLTTHIDKGHIHNHIIFCAVNFVD
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEEHHHH
YHKYNSNKRSYYGIRNMSDKLCRENGLSVVVPGKGSKGKSYAEYQAEKVGASWKGKLKIT
HHHCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEE
VDTLIPQVASFEELLQRLQAAGYEIKPGKYISCRAPGQERFTRLKTLGADYTEEAIKERI
HHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHH
EGKRTKAAKAPKEQRVVSLLIDIENSIKAAQSRGYEQWAKIHNLKLAAKTMNFLTEHKIE
CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QYADLVSRIEEVNAENEKTADALKSVEKRLANMVVLMKHVTTYQKTKPVYEAYRRAKDKD
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHH
AYRAKQESSLILHEAAAKALKTAGVSKLPNVAALQVDYEKLREQKEALYADYGKLKKQVK
HHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHH
EYDVIKQNIDSILRQPREPEREKGKERGE
HHHHHHHHHHHHHHCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA