Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698688

Identifier: 126698688

GI number: 126698688

Start: 1292761

End: 1293090

Strand: Direct

Name: 126698688

Synonym: CD1101

Alternate gene names: NA

Gene position: 1292761-1293090 (Clockwise)

Preceding gene: 126698687

Following gene: 126698689

Centisome position: 30.13

GC content: 44.85

Gene sequence:

>330_bases
ATGAACGGACGCAAAAGAAAAATACAAATCAAATTCTATGTAACAGAGGAAGAAAGGGCATTGATTGAGCAGAAAATGAA
GCTCGTCCCCACCCGGAACATGGCGGCGTATCTTCGCAAGATTGCCATTGACGGGTATATCATTCAGACAGACCATAGCG
ACATAAAAGCCATGACAGCGGAGATACAGAAAATCGGGGTCAATATCAATCAGATTGCAAAGCGTGTCAACGCGACAGGC
AGCGTCTACCAAGAGGACATAGAGGAAATAAAGGGGGTGCTTGCGGAGATATGGCGGTTACAAAGATTAAGCCTATTAAA
AGCACGTTGA

Upstream 100 bases:

>100_bases
ACCATTTTCCGTATTTTCGCCCTCCCGCCCTGCGGTGCGTCGGTTGAAAATTGCTTGTTGGGAAGTGTCCCAAACCCTCA
AAGCGGAAAGGAGCGATTGC

Downstream 100 bases:

>100_bases
GCAAAGCCCTTGACTATATCCAAAACCCGGATAAAACAGACGGGAAAATGCTTGTGTCCTCTTTTGGGTGCAGCTATGAA
ACGGCAGATATTGAGTTTGG

Product: mobilization protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MNGRKRKIQIKFYVTEEERALIEQKMKLVPTRNMAAYLRKIAIDGYIIQTDHSDIKAMTAEIQKIGVNINQIAKRVNATG
SVYQEDIEEIKGVLAEIWRLQRLSLLKAR

Sequences:

>Translated_109_residues
MNGRKRKIQIKFYVTEEERALIEQKMKLVPTRNMAAYLRKIAIDGYIIQTDHSDIKAMTAEIQKIGVNINQIAKRVNATG
SVYQEDIEEIKGVLAEIWRLQRLSLLKAR
>Mature_109_residues
MNGRKRKIQIKFYVTEEERALIEQKMKLVPTRNMAAYLRKIAIDGYIIQTDHSDIKAMTAEIQKIGVNINQIAKRVNATG
SVYQEDIEEIKGVLAEIWRLQRLSLLKAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12629; Mature: 12629

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGRKRKIQIKFYVTEEERALIEQKMKLVPTRNMAAYLRKIAIDGYIIQTDHSDIKAMTA
CCCCCEEEEEEEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEECCCHHHHHHHH
EIQKIGVNINQIAKRVNATGSVYQEDIEEIKGVLAEIWRLQRLSLLKAR
HHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNGRKRKIQIKFYVTEEERALIEQKMKLVPTRNMAAYLRKIAIDGYIIQTDHSDIKAMTA
CCCCCEEEEEEEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEECCCHHHHHHHH
EIQKIGVNINQIAKRVNATGSVYQEDIEEIKGVLAEIWRLQRLSLLKAR
HHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA