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The map label for this gene is cpsA1 [H]

Identifier: 126698673

GI number: 126698673

Start: 1279246

End: 1280433

Strand: Direct

Name: cpsA1 [H]

Synonym: CD1086

Alternate gene names: 126698673

Gene position: 1279246-1280433 (Clockwise)

Preceding gene: 126698672

Following gene: 126698674

Centisome position: 29.82

GC content: 36.2

Gene sequence:

>1188_bases
ATGTGTACTACTTGGAGGTATGGAATGGATATTAAAGAAATAACAAAGAGTTATAAAGACTATGTAATTAAGCTTAGAAG
GGAATTTCATGAAAATCCTGAGAAAAGTATGGAAGAAGTTAGAACATCAAAGAGAGTTAAAGAAGAACTTGATAAAATAG
GGATACCATATGTATCAGCTGGAGGTACAGGTGTAATTGCAACTATAAAAGGAGCTAATCCAGGAAAGACTGTAGCACTT
AGGGGTGATATGGATGCTCTACAAGTTGTTGAATGCACTGATGTAGAATACAAATCTAAAAATGAAGGACTTATGCATGC
TTGTGGTCATGATGGTCACACATCAATGCTTCTAGGGGCAGCAAAAGTGTTAAATGATATTAAGGATAGTATCAATGGAA
CTGTAAAATTATTTTTTCAGCCAGGAGAAGAAGTTGGTAAAGGTGCAAGAGCTATGATTCAAGATGGTGCTATGGAAGGT
GTAGATAGTGTGTTTGGAATACATCTTTGGACTGATGTAGAATCTGGGACCATATCGGTAGAAGAAGGACCAAGAATGGC
TTCTGCTGATTTCTTTAAAATTACTGTAAAAGGTAGAGGTGGTCATGGTTCACTTCCTCATCAAGGTGTTGATGCAGTGC
TTGCAAGTTCAGCAATAGTTATGAATCTACAATCTATGGTTAGTAGAGAAGTAAGTCCTCTGGAACCATTAGTTGTGAGT
GTTGGAGTTTTAAATTCTGGAACTAGATTTAACGTAATTGCGAGTGAAGCTGTCTTAGAAGGTACAATAAGGCTATTTAA
TCCAGAGCTTAGAAAGCAAATTCCTGGAATTTTAGAACGTATAGCAAAATCTACAGCAGAAGCATATAGAGCAGATGCTG
AATTAGAGTATGGGTACTTAACACCAGCAGTTATAAATGACAAAGAATGTTCAAAGATAGCTACAGATGCAGCAATTAAG
CTATTTGGAGAAGACTGTATAACACTATTTGAAAAAGTAACAGGAGCAGAAGATTTAGCTGAGTTTATGAATATAGCACC
TGGTGCACTAGCATTTGTAGGAGCTAGAAATGAGTCAAAAGGTGCTTGTTATCCTCATCATCATGGATGCTTTAATATAG
ATGAAGATGCTCTAGAAATTGGAACTGCTTTATACGTGCAATATGCAGTGGATTTCTTAAATAAATAA

Upstream 100 bases:

>100_bases
GAGGATTTACTACAGTTACAATAGCTTCTGTAGTAATAGCAGGTATCTTTGTAAATCTAATATAGTATTTAAGTGATAAA
AAGTATTTTAAATAAGAAGA

Downstream 100 bases:

>100_bases
TTTTAATATACTATAAAGAAAAAGCAGAGACTAAGTTTATATCTCTGCTTTTTTATTATGTATATTTTTTATAAATATTG
ACTATATAAAATATATATGA

Product: peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MCTTWRYGMDIKEITKSYKDYVIKLRREFHENPEKSMEEVRTSKRVKEELDKIGIPYVSAGGTGVIATIKGANPGKTVAL
RGDMDALQVVECTDVEYKSKNEGLMHACGHDGHTSMLLGAAKVLNDIKDSINGTVKLFFQPGEEVGKGARAMIQDGAMEG
VDSVFGIHLWTDVESGTISVEEGPRMASADFFKITVKGRGGHGSLPHQGVDAVLASSAIVMNLQSMVSREVSPLEPLVVS
VGVLNSGTRFNVIASEAVLEGTIRLFNPELRKQIPGILERIAKSTAEAYRADAELEYGYLTPAVINDKECSKIATDAAIK
LFGEDCITLFEKVTGAEDLAEFMNIAPGALAFVGARNESKGACYPHHHGCFNIDEDALEIGTALYVQYAVDFLNK

Sequences:

>Translated_395_residues
MCTTWRYGMDIKEITKSYKDYVIKLRREFHENPEKSMEEVRTSKRVKEELDKIGIPYVSAGGTGVIATIKGANPGKTVAL
RGDMDALQVVECTDVEYKSKNEGLMHACGHDGHTSMLLGAAKVLNDIKDSINGTVKLFFQPGEEVGKGARAMIQDGAMEG
VDSVFGIHLWTDVESGTISVEEGPRMASADFFKITVKGRGGHGSLPHQGVDAVLASSAIVMNLQSMVSREVSPLEPLVVS
VGVLNSGTRFNVIASEAVLEGTIRLFNPELRKQIPGILERIAKSTAEAYRADAELEYGYLTPAVINDKECSKIATDAAIK
LFGEDCITLFEKVTGAEDLAEFMNIAPGALAFVGARNESKGACYPHHHGCFNIDEDALEIGTALYVQYAVDFLNK
>Mature_395_residues
MCTTWRYGMDIKEITKSYKDYVIKLRREFHENPEKSMEEVRTSKRVKEELDKIGIPYVSAGGTGVIATIKGANPGKTVAL
RGDMDALQVVECTDVEYKSKNEGLMHACGHDGHTSMLLGAAKVLNDIKDSINGTVKLFFQPGEEVGKGARAMIQDGAMEG
VDSVFGIHLWTDVESGTISVEEGPRMASADFFKITVKGRGGHGSLPHQGVDAVLASSAIVMNLQSMVSREVSPLEPLVVS
VGVLNSGTRFNVIASEAVLEGTIRLFNPELRKQIPGILERIAKSTAEAYRADAELEYGYLTPAVINDKECSKIATDAAIK
LFGEDCITLFEKVTGAEDLAEFMNIAPGALAFVGARNESKGACYPHHHGCFNIDEDALEIGTALYVQYAVDFLNK

Specific function: Can release basic, acidic, aromatic, and, to a lesser extent, aliphatic amino acids [H]

COG id: COG1473

COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI87081880, Length=434, Percent_Identity=26.9585253456221, Blast_Score=118, Evalue=6e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017439
- InterPro:   IPR010168
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 42843; Mature: 42843

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCTTWRYGMDIKEITKSYKDYVIKLRREFHENPEKSMEEVRTSKRVKEELDKIGIPYVSA
CCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEC
GGTGVIATIKGANPGKTVALRGDMDALQVVECTDVEYKSKNEGLMHACGHDGHTSMLLGA
CCCEEEEEEECCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCEEECCCCCCHHHHHHH
AKVLNDIKDSINGTVKLFFQPGEEVGKGARAMIQDGAMEGVDSVFGIHLWTDVESGTISV
HHHHHHHHHCCCCEEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEE
EEGPRMASADFFKITVKGRGGHGSLPHQGVDAVLASSAIVMNLQSMVSREVSPLEPLVVS
CCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEE
VGVLNSGTRFNVIASEAVLEGTIRLFNPELRKQIPGILERIAKSTAEAYRADAELEYGYL
EEECCCCCEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC
TPAVINDKECSKIATDAAIKLFGEDCITLFEKVTGAEDLAEFMNIAPGALAFVGARNESK
CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCCC
GACYPHHHGCFNIDEDALEIGTALYVQYAVDFLNK
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MCTTWRYGMDIKEITKSYKDYVIKLRREFHENPEKSMEEVRTSKRVKEELDKIGIPYVSA
CCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEC
GGTGVIATIKGANPGKTVALRGDMDALQVVECTDVEYKSKNEGLMHACGHDGHTSMLLGA
CCCEEEEEEECCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCEEECCCCCCHHHHHHH
AKVLNDIKDSINGTVKLFFQPGEEVGKGARAMIQDGAMEGVDSVFGIHLWTDVESGTISV
HHHHHHHHHCCCCEEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEE
EEGPRMASADFFKITVKGRGGHGSLPHQGVDAVLASSAIVMNLQSMVSREVSPLEPLVVS
CCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEE
VGVLNSGTRFNVIASEAVLEGTIRLFNPELRKQIPGILERIAKSTAEAYRADAELEYGYL
EEECCCCCEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC
TPAVINDKECSKIATDAAIKLFGEDCITLFEKVTGAEDLAEFMNIAPGALAFVGARNESK
CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCCC
GACYPHHHGCFNIDEDALEIGTALYVQYAVDFLNK
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7559343; 11427726; 1597179 [H]