| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698653
Identifier: 126698653
GI number: 126698653
Start: 1258882
End: 1259787
Strand: Direct
Name: 126698653
Synonym: CD1066
Alternate gene names: NA
Gene position: 1258882-1259787 (Clockwise)
Preceding gene: 126698651
Following gene: 126698654
Centisome position: 29.34
GC content: 26.82
Gene sequence:
>906_bases TTGAATAACTTACTATTTTTGATTGGAGTGATTGCATTGAGTAATGGTAATATCTCTATATTTGATGATAAAAATAAATC AAAAGGAAATAATAGAGTTAGAAAAAACAAAAAAAATGCAAATGATAAACTTTCACAGTCTACACATGGCAATTTAAGGT TTGATGCAAATGATATAAAAAGAGGTTTAAGGCTCATGGATTTAAGTGAAGAAGATTTAGAAATGGGAATGGAAATAATA ACAAGAACTAAAAAATACATGTCAAGAGATGAAAGAAAAATACTAATAAAAATAGAAAGTGTTTTAGATTTAGTTAGAGG AATAAAAAAATTAAATAATATAGATATGGTAGATACAGAAGATGAAACGGATTTTTTCAGAAAAATGGATAGTGATGATA AAAAGAATATGATGATAAAGGAAATTATAGATGTATTCCCAGAAAAAAGAAAAAATTCAGTTGAAAAAGCTATAGGAATG AAAAAGAAGATAGATTTATTTGCAGAATTATTTTTACCAGATGACTTTGGTGAAGGTGGATTTAGTTTGAGCTCTTTGGC AAATATAAACAATCTTGGTAGTATGAATAATCTCAAATTGTTAGGAAGTCTTTTAAGAGGTGATGATAGTAATAATGATG ATGAAGACAATAATGATGAGTTAAATTATGAAGACGAAGAATTAGATTGTGAAGACAAAGAATTGGATGATGATGAGTTA ACAGATGAAGGTGAAATGGAGGATAATGAAGATGAATTAGTAGAAGATAAGAACACAGGCTATGAAAATATAGAAAATGA TGAAGATATAGTATACGATGAGGAACTATACAACATTAATGAGCAAGAATCCGAATACAATTATAATGAAAAAAATACTA AAACTAGAGCTAAGAAAAAACGATAA
Upstream 100 bases:
>100_bases TATAGATAATATATATGCACTGAGCTTTAAAAATGGAACATTAAAATATGAAAAACATACTTTAATATAGGGCAATTATA TAATATAAGGGGGAATTGTC
Downstream 100 bases:
>100_bases TTAACTAAATACATAAAGAAAAAAGGAAGAAAAAGTAATGATAGAATAAGATTATCTCAATTACTATATAAAACCACTTT AAAAAATTCAAAATTTATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MNNLLFLIGVIALSNGNISIFDDKNKSKGNNRVRKNKKNANDKLSQSTHGNLRFDANDIKRGLRLMDLSEEDLEMGMEII TRTKKYMSRDERKILIKIESVLDLVRGIKKLNNIDMVDTEDETDFFRKMDSDDKKNMMIKEIIDVFPEKRKNSVEKAIGM KKKIDLFAELFLPDDFGEGGFSLSSLANINNLGSMNNLKLLGSLLRGDDSNNDDEDNNDELNYEDEELDCEDKELDDDEL TDEGEMEDNEDELVEDKNTGYENIENDEDIVYDEELYNINEQESEYNYNEKNTKTRAKKKR
Sequences:
>Translated_301_residues MNNLLFLIGVIALSNGNISIFDDKNKSKGNNRVRKNKKNANDKLSQSTHGNLRFDANDIKRGLRLMDLSEEDLEMGMEII TRTKKYMSRDERKILIKIESVLDLVRGIKKLNNIDMVDTEDETDFFRKMDSDDKKNMMIKEIIDVFPEKRKNSVEKAIGM KKKIDLFAELFLPDDFGEGGFSLSSLANINNLGSMNNLKLLGSLLRGDDSNNDDEDNNDELNYEDEELDCEDKELDDDEL TDEGEMEDNEDELVEDKNTGYENIENDEDIVYDEELYNINEQESEYNYNEKNTKTRAKKKR >Mature_301_residues MNNLLFLIGVIALSNGNISIFDDKNKSKGNNRVRKNKKNANDKLSQSTHGNLRFDANDIKRGLRLMDLSEEDLEMGMEII TRTKKYMSRDERKILIKIESVLDLVRGIKKLNNIDMVDTEDETDFFRKMDSDDKKNMMIKEIIDVFPEKRKNSVEKAIGM KKKIDLFAELFLPDDFGEGGFSLSSLANINNLGSMNNLKLLGSLLRGDDSNNDDEDNNDELNYEDEELDCEDKELDDDEL TDEGEMEDNEDELVEDKNTGYENIENDEDIVYDEELYNINEQESEYNYNEKNTKTRAKKKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34893; Mature: 34893
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNLLFLIGVIALSNGNISIFDDKNKSKGNNRVRKNKKNANDKLSQSTHGNLRFDANDIK CCCCEEEEHHHHCCCCCEEEEECCCCCCCCHHHHHCCCCCCHHHHHCCCCCEEECHHHHH RGLRLMDLSEEDLEMGMEIITRTKKYMSRDERKILIKIESVLDLVRGIKKLNNIDMVDTE CCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCC DETDFFRKMDSDDKKNMMIKEIIDVFPEKRKNSVEKAIGMKKKIDLFAELFLPDDFGEGG CHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC FSLSSLANINNLGSMNNLKLLGSLLRGDDSNNDDEDNNDELNYEDEELDCEDKELDDDEL CCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TDEGEMEDNEDELVEDKNTGYENIENDEDIVYDEELYNINEQESEYNYNEKNTKTRAKKK CCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEECHHHHCCCCHHHHCCCCCHHHHHHHHCC R C >Mature Secondary Structure MNNLLFLIGVIALSNGNISIFDDKNKSKGNNRVRKNKKNANDKLSQSTHGNLRFDANDIK CCCCEEEEHHHHCCCCCEEEEECCCCCCCCHHHHHCCCCCCHHHHHCCCCCEEECHHHHH RGLRLMDLSEEDLEMGMEIITRTKKYMSRDERKILIKIESVLDLVRGIKKLNNIDMVDTE CCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCC DETDFFRKMDSDDKKNMMIKEIIDVFPEKRKNSVEKAIGMKKKIDLFAELFLPDDFGEGG CHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC FSLSSLANINNLGSMNNLKLLGSLLRGDDSNNDDEDNNDELNYEDEELDCEDKELDDDEL CCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TDEGEMEDNEDELVEDKNTGYENIENDEDIVYDEELYNINEQESEYNYNEKNTKTRAKKK CCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEECHHHHCCCCHHHHCCCCCHHHHHHHHCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA