Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698533

Identifier: 126698533

GI number: 126698533

Start: 1120449

End: 1120874

Strand: Direct

Name: 126698533

Synonym: CD0952

Alternate gene names: NA

Gene position: 1120449-1120874 (Clockwise)

Preceding gene: 126698532

Following gene: 126698534

Centisome position: 26.12

GC content: 35.21

Gene sequence:

>426_bases
ATGGCTAGATGGGGCAGTGTTGATTTTAGAGAGTTTAAAAGAGTTTGTAAAAAGATGGAGGAGCTTACAAAGATTGATTT
AGATAAGTTTTGCAAGGATGCAGCAAGAGAATTAGCAGCACGATTACTTGGGAAAGTAATTAGAAGAACACCAGTTGATA
CAGGATTCTTACGACAAGGATGGAATGGAGTGGCTTATGCTAGGTCGCTTCCTGTGTATAAACAAGGAAATAATTATATT
ATAGAGGTTGTTAATCCGACTGAATATGCCAGTTATGTTGAATATGGCCATAGAACTAAAGGCGGTAAAGGATGGGTTAA
AGGACAACATTTCTTAACTATTTCAGAAATGGAGTTACAAGGTCAAGTTGATAAGATAATAGAGAAAAAACTATTAATAT
TGCTTAAAGGAGTGTTTGATGCTTAA

Upstream 100 bases:

>100_bases
AACTTATTATAAATGATAAAGAGTATGTAAGAAGTGGAGAATCAGCTATATATCCAAATCATCAAGAAATAATACTTGAG
TTATTTAAGGATAAAGCATA

Downstream 100 bases:

>100_bases
TAATATTATAGATGGAATATCAGTAAAGTTAGATAAATCGTTTGGAGAAAAATATACAATTTATAGCGAAGATGTGGAGC
AAGGTATTAATGAACCTTGT

Product: phage protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MARWGSVDFREFKRVCKKMEELTKIDLDKFCKDAARELAARLLGKVIRRTPVDTGFLRQGWNGVAYARSLPVYKQGNNYI
IEVVNPTEYASYVEYGHRTKGGKGWVKGQHFLTISEMELQGQVDKIIEKKLLILLKGVFDA

Sequences:

>Translated_141_residues
MARWGSVDFREFKRVCKKMEELTKIDLDKFCKDAARELAARLLGKVIRRTPVDTGFLRQGWNGVAYARSLPVYKQGNNYI
IEVVNPTEYASYVEYGHRTKGGKGWVKGQHFLTISEMELQGQVDKIIEKKLLILLKGVFDA
>Mature_140_residues
ARWGSVDFREFKRVCKKMEELTKIDLDKFCKDAARELAARLLGKVIRRTPVDTGFLRQGWNGVAYARSLPVYKQGNNYII
EVVNPTEYASYVEYGHRTKGGKGWVKGQHFLTISEMELQGQVDKIIEKKLLILLKGVFDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16185; Mature: 16054

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARWGSVDFREFKRVCKKMEELTKIDLDKFCKDAARELAARLLGKVIRRTPVDTGFLRQG
CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC
WNGVAYARSLPVYKQGNNYIIEVVNPTEYASYVEYGHRTKGGKGWVKGQHFLTISEMELQ
CCCHHHHHCCCCEECCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHH
GQVDKIIEKKLLILLKGVFDA
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ARWGSVDFREFKRVCKKMEELTKIDLDKFCKDAARELAARLLGKVIRRTPVDTGFLRQG
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC
WNGVAYARSLPVYKQGNNYIIEVVNPTEYASYVEYGHRTKGGKGWVKGQHFLTISEMELQ
CCCHHHHHCCCCEECCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHH
GQVDKIIEKKLLILLKGVFDA
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA