| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
Click here to switch to the map view.
The map label for this gene is 126698532
Identifier: 126698532
GI number: 126698532
Start: 1120102
End: 1120449
Strand: Direct
Name: 126698532
Synonym: CD0951
Alternate gene names: NA
Gene position: 1120102-1120449 (Clockwise)
Preceding gene: 126698531
Following gene: 126698533
Centisome position: 26.11
GC content: 27.59
Gene sequence:
>348_bases ATGGTAAGTAAAACTAGAAAAGCAATAGAAATGTTATATAGAGATAAATGTACTATAGTTGAGTATCAGCCAATTAAAGA CCCTGTAACAAAACGAACTAACAATAAAGAAGTGATTGTATTAGAAAATCAACCATGTAAACTTTCATATAAAAATATAG TTTCTGCTACAGAAGGGAAAGTAGCTAAGCTAGAGCAAACTATTAAACTCTTTATATCTCCAGATATAGAAATTAAAGCA GGTTCAAAACTTATTATAAATGATAAAGAGTATGTAAGAAGTGGAGAATCAGCTATATATCCAAATCATCAAGAAATAAT ACTTGAGTTATTTAAGGATAAAGCATAA
Upstream 100 bases:
>100_bases TAGGAAGTGGTTCTCAAACACCAGAACAACGCTTTGATAGCTTAATAGCTTATCTTACTACTTATGGCAAGAATAAGATA TTAACCTTTAGGTGCTTAAG
Downstream 100 bases:
>100_bases TGGCTAGATGGGGCAGTGTTGATTTTAGAGAGTTTAAAAGAGTTTGTAAAAAGATGGAGGAGCTTACAAAGATTGATTTA GATAAGTTTTGCAAGGATGC
Product: phage protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MVSKTRKAIEMLYRDKCTIVEYQPIKDPVTKRTNNKEVIVLENQPCKLSYKNIVSATEGKVAKLEQTIKLFISPDIEIKA GSKLIINDKEYVRSGESAIYPNHQEIILELFKDKA
Sequences:
>Translated_115_residues MVSKTRKAIEMLYRDKCTIVEYQPIKDPVTKRTNNKEVIVLENQPCKLSYKNIVSATEGKVAKLEQTIKLFISPDIEIKA GSKLIINDKEYVRSGESAIYPNHQEIILELFKDKA >Mature_115_residues MVSKTRKAIEMLYRDKCTIVEYQPIKDPVTKRTNNKEVIVLENQPCKLSYKNIVSATEGKVAKLEQTIKLFISPDIEIKA GSKLIINDKEYVRSGESAIYPNHQEIILELFKDKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13185; Mature: 13185
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSKTRKAIEMLYRDKCTIVEYQPIKDPVTKRTNNKEVIVLENQPCKLSYKNIVSATEGK CCCHHHHHHHHHHCCCCEEEEEECCCCCHHCCCCCCEEEEECCCCCEEEHHHHHCCCCCC VAKLEQTIKLFISPDIEIKAGSKLIINDKEYVRSGESAIYPNHQEIILELFKDKA HHHHHHHEEEEECCCEEEECCCEEEECCHHHHHCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MVSKTRKAIEMLYRDKCTIVEYQPIKDPVTKRTNNKEVIVLENQPCKLSYKNIVSATEGK CCCHHHHHHHHHHCCCCEEEEEECCCCCHHCCCCCCEEEEECCCCCEEEHHHHHCCCCCC VAKLEQTIKLFISPDIEIKAGSKLIINDKEYVRSGESAIYPNHQEIILELFKDKA HHHHHHHEEEEECCCEEEECCCEEEECCHHHHHCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA