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The map label for this gene is yqaS [H]

Identifier: 126698523

GI number: 126698523

Start: 1112621

End: 1113313

Strand: Direct

Name: yqaS [H]

Synonym: CD0943

Alternate gene names: 126698523

Gene position: 1112621-1113313 (Clockwise)

Preceding gene: 126698522

Following gene: 126698524

Centisome position: 25.93

GC content: 31.46

Gene sequence:

>693_bases
GTGCAAGATGTCAAAGAAAAGGTAAAACAAGATTACTTAAAAGGAATGAAACAAAAGGAAATAGCATCAAAGTATGACAT
TAGCTTAAACACTTTAAAGTCATGGATAAAAAGATACAACTGGTCAAAGGAAAAAAAGAAGGGTGCACCTATAAATAAAA
GGGGTGCACCCTTTTCTAATAAAAATTCAGTTGGCCATGGTGCTCCAAAAGAGAATAAGAATGCTGAAAAGTTTGGTTTC
TTCTCAAAATACTTACCTGAAGAAACCCAAGACTTAATTAATGAGATAAAGAATAAAGATAAATTTGATATTCTTTGGGA
ACAGATAACAATTCAATATGCAGCAATAATAAGAGCACAAAAGATAATGTATGTTAAAGGCAAGGAAGAAATGGTTAAAG
AATTAAAGAAATATGAAAGCACAGAAAATGGTGAGAAGATAGAGTATGAATTTCAATTTGCATGGGATAGGCAAGCATCT
TTTCTTAATGCACAGAGTAGGGCTATGAGTGAGTTAAGGAGTTTAATTAAACAGTATGATGAAATGATTCATAAGGATTG
GAATTTAGCTACAGAGGAGCAGAAAAATAGAGTTGAGAAGTTGAAATGTGAAGTTAATAACCTAAGTAAAGATGATATTG
GAGATGATGAGTTGAAAATAAGTGTAGATTATGGTGATAGAAATGATAGTTAG

Upstream 100 bases:

>100_bases
TGAATTTGAATTGAATCTTAAAGTAGAGTAAACAAAAAAAGAATCTCAATTATGAGGTTCTTTTTTTATTCCCAAAACAA
ACAAATAAAGAGGTGGTGAT

Downstream 100 bases:

>100_bases
AGTAAATTTTAATCCAGATTTCAAGGAAGCTAATTTTACTAAAAAAAGATACAGAGCAATGAAAGGTTCAGCAGGAAGTG
GAAAATCTGTTAATGTAGCA

Product: phage DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MQDVKEKVKQDYLKGMKQKEIASKYDISLNTLKSWIKRYNWSKEKKKGAPINKRGAPFSNKNSVGHGAPKENKNAEKFGF
FSKYLPEETQDLINEIKNKDKFDILWEQITIQYAAIIRAQKIMYVKGKEEMVKELKKYESTENGEKIEYEFQFAWDRQAS
FLNAQSRAMSELRSLIKQYDEMIHKDWNLATEEQKNRVEKLKCEVNNLSKDDIGDDELKISVDYGDRNDS

Sequences:

>Translated_230_residues
MQDVKEKVKQDYLKGMKQKEIASKYDISLNTLKSWIKRYNWSKEKKKGAPINKRGAPFSNKNSVGHGAPKENKNAEKFGF
FSKYLPEETQDLINEIKNKDKFDILWEQITIQYAAIIRAQKIMYVKGKEEMVKELKKYESTENGEKIEYEFQFAWDRQAS
FLNAQSRAMSELRSLIKQYDEMIHKDWNLATEEQKNRVEKLKCEVNNLSKDDIGDDELKISVDYGDRNDS
>Mature_230_residues
MQDVKEKVKQDYLKGMKQKEIASKYDISLNTLKSWIKRYNWSKEKKKGAPINKRGAPFSNKNSVGHGAPKENKNAEKFGF
FSKYLPEETQDLINEIKNKDKFDILWEQITIQYAAIIRAQKIMYVKGKEEMVKELKKYESTENGEKIEYEFQFAWDRQAS
FLNAQSRAMSELRSLIKQYDEMIHKDWNLATEEQKNRVEKLKCEVNNLSKDDIGDDELKISVDYGDRNDS

Specific function: Unknown

COG id: COG5484

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018925 [H]

Pfam domain/function: PF10668 Phage_terminase [H]

EC number: NA

Molecular weight: Translated: 27086; Mature: 27086

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDVKEKVKQDYLKGMKQKEIASKYDISLNTLKSWIKRYNWSKEKKKGAPINKRGAPFSN
CCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCC
KNSVGHGAPKENKNAEKFGFFSKYLPEETQDLINEIKNKDKFDILWEQITIQYAAIIRAQ
CCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
KIMYVKGKEEMVKELKKYESTENGEKIEYEFQFAWDRQASFLNAQSRAMSELRSLIKQYD
HHEEECCHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
EMIHKDWNLATEEQKNRVEKLKCEVNNLSKDDIGDDELKISVDYGDRNDS
HHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MQDVKEKVKQDYLKGMKQKEIASKYDISLNTLKSWIKRYNWSKEKKKGAPINKRGAPFSN
CCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCC
KNSVGHGAPKENKNAEKFGFFSKYLPEETQDLINEIKNKDKFDILWEQITIQYAAIIRAQ
CCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
KIMYVKGKEEMVKELKKYESTENGEKIEYEFQFAWDRQASFLNAQSRAMSELRSLIKQYD
HHEEECCHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
EMIHKDWNLATEEQKNRVEKLKCEVNNLSKDDIGDDELKISVDYGDRNDS
HHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]