| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698498
Identifier: 126698498
GI number: 126698498
Start: 1100713
End: 1101063
Strand: Direct
Name: 126698498
Synonym: CD0921
Alternate gene names: NA
Gene position: 1100713-1101063 (Clockwise)
Preceding gene: 126698497
Following gene: 126698499
Centisome position: 25.66
GC content: 27.64
Gene sequence:
>351_bases ATGTTGGGAAAGACAGGAAAAAATAATATTAGTGTTTGTTATCAATGTAGAAATGAAGATATAAGCGAAGATGCTAGATA TTGTAAGATTTGTGGAATAGGGTTAAGAGTTATGGAATTAGTGAGTGTTTTTAACTTTGAAACAGAAGAAAAAGAATTTT CATTTTTAACAGGCAAAGAATGTCTTATAGATTTTGGAGATTTAAGAGAAGGCAATATGTGTAAATTATTCTTTGAAAAT TCAGAATTAAGAATTATTGGAGTAGAAAATATTTATCAAGATGAAAGAGGTATATTTATTGAAGCTGGTGAGTGTAGCTA TGAAATAATATTTAAAGATTTGGAGTGGTAG
Upstream 100 bases:
>100_bases AAAGAGAAATGTTGTGGTTTAAGATATTGCATTTATCAGCAGTTGTAGCAAAAATAATGCAATATAAAATGTTAGGTATT TCAAAATGAGGAGAGCTGAA
Downstream 100 bases:
>100_bases AATATGGCTAAAATTTGGGTAGATGCAGGAACATTTTTAGAAAAAACTATTGATATAGAAGATATGTTTGAGCTTAATTT AAGAAAAGTAAGAAAAGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MLGKTGKNNISVCYQCRNEDISEDARYCKICGIGLRVMELVSVFNFETEEKEFSFLTGKECLIDFGDLREGNMCKLFFEN SELRIIGVENIYQDERGIFIEAGECSYEIIFKDLEW
Sequences:
>Translated_116_residues MLGKTGKNNISVCYQCRNEDISEDARYCKICGIGLRVMELVSVFNFETEEKEFSFLTGKECLIDFGDLREGNMCKLFFEN SELRIIGVENIYQDERGIFIEAGECSYEIIFKDLEW >Mature_116_residues MLGKTGKNNISVCYQCRNEDISEDARYCKICGIGLRVMELVSVFNFETEEKEFSFLTGKECLIDFGDLREGNMCKLFFEN SELRIIGVENIYQDERGIFIEAGECSYEIIFKDLEW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13483; Mature: 13483
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 6.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGKTGKNNISVCYQCRNEDISEDARYCKICGIGLRVMELVSVFNFETEEKEFSFLTGKE CCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCEEEEECCCC CLIDFGDLREGNMCKLFFENSELRIIGVENIYQDERGIFIEAGECSYEIIFKDLEW CEEECCCCCCCCEEEEEEECCCEEEEECHHEEECCCCEEEECCCCEEEEEEEECCC >Mature Secondary Structure MLGKTGKNNISVCYQCRNEDISEDARYCKICGIGLRVMELVSVFNFETEEKEFSFLTGKE CCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCEEEEECCCC CLIDFGDLREGNMCKLFFENSELRIIGVENIYQDERGIFIEAGECSYEIIFKDLEW CEEECCCCCCCCEEEEEEECCCEEEEECHHEEECCCCEEEECCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA