| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is glgP [H]
Identifier: 126698462
GI number: 126698462
Start: 1064224
End: 1066665
Strand: Direct
Name: glgP [H]
Synonym: CD0885
Alternate gene names: 126698462
Gene position: 1064224-1066665 (Clockwise)
Preceding gene: 126698461
Following gene: 126698463
Centisome position: 24.81
GC content: 29.07
Gene sequence:
>2442_bases GTGATTAAAGGAGTGGTTTTTTTGGTAACAATAAGCAAAAAGAAATTCAAGCAAAAATTTGAAGTAAAAATGTATAGCTT ATATGCACAATCTATCAAGGAAGCTACTGATGAACAATTGTTAAATGTATTATGTAGTCTATTGAAAGATGAGATAGCAA AAAAATGGGTTGCTACAAAGTTAGATAAGAAAAAAGAAGTTTATTATTTTAGTTTAGAATTTTTAATAGGGAGACAGTTA AAATCTAATTTATTAAATTTAAATATTGAAGAAGAAGTTAGAGAAGGTTTATCTGAATTAGGAATCAACTTGGATGATTT AATTGAAGCTGAAGTAGACCCAGCCTTAGGAAATGGTGGACTTGGTAGATTAGCAGCTTGCTTTTTAGATTCTATGGCAT CTTTGAACATAAGTGGTCAAGGATATGGAATAAGGTATAAATATGGTCTGTTTGAACAAAAATTTGTAAATGGTTATCAG GTAGAAGTGCCTGATAACTGGCTTACAGAAGGACGATATGCATGGGAAACTGTAAGACCAAATGAAGCAACAATGGTGAA GTTTGGTGGTGAGGTAGAATTAATCAAGGAAGGTAGTCATTTAAAAGTAATTCATAAAAACTACCTTCCTGTAATGGCAA TGCCTTATGATATACCAATAATCGGATACCAAAACCAATGTATAAATACTTTAAGATTGTTTAAGAGTGAAATACCAAAG AGAGATTTTGGTGAACTTACCTCAAATGCTCTAAATTATTCTGGTAGCTATGAAGAGGCTTTAAAACATAAGTATTATAC TGAGGAAATATCACAGGTATTATATCCTGATGATTCAAATTATGCAGGTAAGTTGTTGAGGTTGAAACAAGAATACTTTT TTGTAAGTGCAGGGATACAAGATATAATAAGAAAATATAAAAAGAACAAATTAAATATTAATAATTTATTCGATAAGGTA GCAATTCATATAAATGATACACATCCTACCTTATGCATACCAGAACTTATGAGAATTTTGCTTGATGAAGAAAATTTATC TTGGGATGAAGCATGGGAAATAACTAAAAAAACAGTGTCCTATACTAATCATACTATAATGTCAGAAGCAATGGAAAAAT GGCCTGTAAGTATGATGAAAGAGCTATTACCAAGAATTTATATGATAATAGAAGAAATAAATAGAAGATATGTAGAGGAA TTAAATAATAAAGGATATGACCAAGATAGAATAAAAAGAATGAGTATAATAGACTGTGACAATATCAATATGGCAAACTT ATGTATTGTCACAAGTCATAGTGTAAATGGAGTTGCTAAGCTTCATACTCATATTCTTGAAACAGAGGTATTAAAAGATT TCTATCAAGATGAACCAAATAAATTTAATAATAAGACTAATGGAATTGCACATAGGCGATGGCTTATAAGTTCAAATCCT CAACTTAGCAATTTAATTACAGATTTAATTGGTGATTCATGGAAGAAAGATACATTACAATTAAAAAATATTGAAAAATT TAAAAATGATTCCTCTGTTTTACAAAGACTTGATGATATAAAATACAATAATAAAGCAAATCTAGCAAAGTTTATAAAAG ATAAATACGATTTAAATGTAGACCCAAGTTCGATATTTGATGTTCAAGTTAAGAGATTGCATGCGTATAAAAGACAGTTA CTGAATATATTTAATGTACTTCATATGTATCATGAATTACTTGATAATCCTAATTTGAATCTTGACCCAAGAACTTTTAT ATTTGGCGCAAAAGCAGCACCAGGATATTATTTGGCTAAATGTATAATTAAATTTATAAATTCTGTTGCAAGTACTATAA ATAATGATGTTAGAGTAAAGGACAAGTTAAAAGTAGTATTTTTAGAGAATTATGGAGTATCATTAGCAGAAATAATAATA CCAGCAGCAAATGTTAGTGAGCAAATTTCAACTACAACTAAGGAAGCATCTGGAACAAGTAATATGAAGTTTATGATGAA TGGTGCTATAACTTTGGCTACACTTGACGGTGCAAATGTAGAGATATGTGAACAGGTTGGTAAAGAAAATATGTTTTTAT TTGGACTTAGTGCAGAACAAGTACTAAATTATAATAAATATGGTGGATATTCTTCACTTGACCTATATCATTCTAATATG GATATAAAAAGGGTAGTAGATGATTTAATAAATGGATTTATTCCTAATCTTGGCGAAGAAGGAAGAAGTATTTATAATTC ACTCACTACTTACAATGATGAGTATTTTGTATTGAGAGATTTTGAAAATTATGGTCAAGCTCAAGCAGATATAAACAGGT TATATAGAGATAAAGAAAAATGGAATAAAATGTCTTTAGTTAATATAGCTAACTCTGGATTTTTTTCTTCTGATAGAACA ATTTCTGAGTATGCAAAAGACATTTGGTTTAAAAGGGTGTGA
Upstream 100 bases:
>100_bases GACAAAGAAAAATGGATTAAATTAGTTGAAAATGCAATGAAAACAGATAATAGTTGGAAAAAATCAGCTAAGGAGTATAT AGAAACATATAGAGACATAT
Downstream 100 bases:
>100_bases TTAAATGCAAAGTGTAATAGAATATAACTCTTGGGATAAAAATTTTAAGGCTCCGTTTGGAGCTTTAAAATTTGATGAGG AATTGACCATTTGTGTTAAA
Product: glycogen phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 813; Mature: 813
Protein sequence:
>813_residues MIKGVVFLVTISKKKFKQKFEVKMYSLYAQSIKEATDEQLLNVLCSLLKDEIAKKWVATKLDKKKEVYYFSLEFLIGRQL KSNLLNLNIEEEVREGLSELGINLDDLIEAEVDPALGNGGLGRLAACFLDSMASLNISGQGYGIRYKYGLFEQKFVNGYQ VEVPDNWLTEGRYAWETVRPNEATMVKFGGEVELIKEGSHLKVIHKNYLPVMAMPYDIPIIGYQNQCINTLRLFKSEIPK RDFGELTSNALNYSGSYEEALKHKYYTEEISQVLYPDDSNYAGKLLRLKQEYFFVSAGIQDIIRKYKKNKLNINNLFDKV AIHINDTHPTLCIPELMRILLDEENLSWDEAWEITKKTVSYTNHTIMSEAMEKWPVSMMKELLPRIYMIIEEINRRYVEE LNNKGYDQDRIKRMSIIDCDNINMANLCIVTSHSVNGVAKLHTHILETEVLKDFYQDEPNKFNNKTNGIAHRRWLISSNP QLSNLITDLIGDSWKKDTLQLKNIEKFKNDSSVLQRLDDIKYNNKANLAKFIKDKYDLNVDPSSIFDVQVKRLHAYKRQL LNIFNVLHMYHELLDNPNLNLDPRTFIFGAKAAPGYYLAKCIIKFINSVASTINNDVRVKDKLKVVFLENYGVSLAEIII PAANVSEQISTTTKEASGTSNMKFMMNGAITLATLDGANVEICEQVGKENMFLFGLSAEQVLNYNKYGGYSSLDLYHSNM DIKRVVDDLINGFIPNLGEEGRSIYNSLTTYNDEYFVLRDFENYGQAQADINRLYRDKEKWNKMSLVNIANSGFFSSDRT ISEYAKDIWFKRV
Sequences:
>Translated_813_residues MIKGVVFLVTISKKKFKQKFEVKMYSLYAQSIKEATDEQLLNVLCSLLKDEIAKKWVATKLDKKKEVYYFSLEFLIGRQL KSNLLNLNIEEEVREGLSELGINLDDLIEAEVDPALGNGGLGRLAACFLDSMASLNISGQGYGIRYKYGLFEQKFVNGYQ VEVPDNWLTEGRYAWETVRPNEATMVKFGGEVELIKEGSHLKVIHKNYLPVMAMPYDIPIIGYQNQCINTLRLFKSEIPK RDFGELTSNALNYSGSYEEALKHKYYTEEISQVLYPDDSNYAGKLLRLKQEYFFVSAGIQDIIRKYKKNKLNINNLFDKV AIHINDTHPTLCIPELMRILLDEENLSWDEAWEITKKTVSYTNHTIMSEAMEKWPVSMMKELLPRIYMIIEEINRRYVEE LNNKGYDQDRIKRMSIIDCDNINMANLCIVTSHSVNGVAKLHTHILETEVLKDFYQDEPNKFNNKTNGIAHRRWLISSNP QLSNLITDLIGDSWKKDTLQLKNIEKFKNDSSVLQRLDDIKYNNKANLAKFIKDKYDLNVDPSSIFDVQVKRLHAYKRQL LNIFNVLHMYHELLDNPNLNLDPRTFIFGAKAAPGYYLAKCIIKFINSVASTINNDVRVKDKLKVVFLENYGVSLAEIII PAANVSEQISTTTKEASGTSNMKFMMNGAITLATLDGANVEICEQVGKENMFLFGLSAEQVLNYNKYGGYSSLDLYHSNM DIKRVVDDLINGFIPNLGEEGRSIYNSLTTYNDEYFVLRDFENYGQAQADINRLYRDKEKWNKMSLVNIANSGFFSSDRT ISEYAKDIWFKRV >Mature_813_residues MIKGVVFLVTISKKKFKQKFEVKMYSLYAQSIKEATDEQLLNVLCSLLKDEIAKKWVATKLDKKKEVYYFSLEFLIGRQL KSNLLNLNIEEEVREGLSELGINLDDLIEAEVDPALGNGGLGRLAACFLDSMASLNISGQGYGIRYKYGLFEQKFVNGYQ VEVPDNWLTEGRYAWETVRPNEATMVKFGGEVELIKEGSHLKVIHKNYLPVMAMPYDIPIIGYQNQCINTLRLFKSEIPK RDFGELTSNALNYSGSYEEALKHKYYTEEISQVLYPDDSNYAGKLLRLKQEYFFVSAGIQDIIRKYKKNKLNINNLFDKV AIHINDTHPTLCIPELMRILLDEENLSWDEAWEITKKTVSYTNHTIMSEAMEKWPVSMMKELLPRIYMIIEEINRRYVEE LNNKGYDQDRIKRMSIIDCDNINMANLCIVTSHSVNGVAKLHTHILETEVLKDFYQDEPNKFNNKTNGIAHRRWLISSNP QLSNLITDLIGDSWKKDTLQLKNIEKFKNDSSVLQRLDDIKYNNKANLAKFIKDKYDLNVDPSSIFDVQVKRLHAYKRQL LNIFNVLHMYHELLDNPNLNLDPRTFIFGAKAAPGYYLAKCIIKFINSVASTINNDVRVKDKLKVVFLENYGVSLAEIII PAANVSEQISTTTKEASGTSNMKFMMNGAITLATLDGANVEICEQVGKENMFLFGLSAEQVLNYNKYGGYSSLDLYHSNM DIKRVVDDLINGFIPNLGEEGRSIYNSLTTYNDEYFVLRDFENYGQAQADINRLYRDKEKWNKMSLVNIANSGFFSSDRT ISEYAKDIWFKRV
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI21361370, Length=793, Percent_Identity=47.0365699873897, Blast_Score=690, Evalue=0.0, Organism=Homo sapiens, GI71037379, Length=825, Percent_Identity=46.4242424242424, Blast_Score=688, Evalue=0.0, Organism=Homo sapiens, GI5032009, Length=812, Percent_Identity=43.8423645320197, Blast_Score=681, Evalue=0.0, Organism=Homo sapiens, GI255653002, Length=698, Percent_Identity=48.8538681948424, Blast_Score=654, Evalue=0.0, Organism=Homo sapiens, GI257900462, Length=685, Percent_Identity=44.3795620437956, Blast_Score=600, Evalue=1e-171, Organism=Escherichia coli, GI2367228, Length=809, Percent_Identity=43.7577255871446, Blast_Score=656, Evalue=0.0, Organism=Escherichia coli, GI48994936, Length=810, Percent_Identity=42.7160493827161, Blast_Score=654, Evalue=0.0, Organism=Caenorhabditis elegans, GI32566204, Length=795, Percent_Identity=46.2893081761006, Blast_Score=715, Evalue=0.0, Organism=Caenorhabditis elegans, GI17564550, Length=795, Percent_Identity=46.2893081761006, Blast_Score=714, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6325418, Length=844, Percent_Identity=41.3507109004739, Blast_Score=568, Evalue=1e-162, Organism=Drosophila melanogaster, GI78706832, Length=784, Percent_Identity=48.0867346938776, Blast_Score=704, Evalue=0.0, Organism=Drosophila melanogaster, GI24581010, Length=784, Percent_Identity=48.0867346938776, Blast_Score=704, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011833 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 93656; Mature: 93656
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKGVVFLVTISKKKFKQKFEVKMYSLYAQSIKEATDEQLLNVLCSLLKDEIAKKWVATK CCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDKKKEVYYFSLEFLIGRQLKSNLLNLNIEEEVREGLSELGINLDDLIEAEVDPALGNGG CCCCCEEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCC LGRLAACFLDSMASLNISGQGYGIRYKYGLFEQKFVNGYQVEVPDNWLTEGRYAWETVRP HHHHHHHHHHHHHHEEECCCCCEEEEECCCHHHHHCCCEEEECCCCCHHCCCEEEEECCC NEATMVKFGGEVELIKEGSHLKVIHKNYLPVMAMPYDIPIIGYQNQCINTLRLFKSEIPK CCCEEEEECCEEEEEECCCEEEEEECCCCCEEECCCCCEEECCCHHHHHHHHHHHHHCCC RDFGELTSNALNYSGSYEEALKHKYYTEEISQVLYPDDSNYAGKLLRLKQEYFFVSAGIQ CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH DIIRKYKKNKLNINNLFDKVAIHINDTHPTLCIPELMRILLDEENLSWDEAWEITKKTVS HHHHHHHCCCCCHHHHHEEEEEEECCCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHH YTNHTIMSEAMEKWPVSMMKELLPRIYMIIEEINRRYVEELNNKGYDQDRIKRMSIIDCD HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEEEEECC NINMANLCIVTSHSVNGVAKLHTHILETEVLKDFYQDEPNKFNNKTNGIAHRRWLISSNP CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCC QLSNLITDLIGDSWKKDTLQLKNIEKFKNDSSVLQRLDDIKYNNKANLAKFIKDKYDLNV HHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC DPSSIFDVQVKRLHAYKRQLLNIFNVLHMYHELLDNPNLNLDPRTFIFGAKAAPGYYLAK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHH CIIKFINSVASTINNDVRVKDKLKVVFLENYGVSLAEIIIPAANVSEQISTTTKEASGTS HHHHHHHHHHHHHCCCCEEECCEEEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHCCCCC NMKFMMNGAITLATLDGANVEICEQVGKENMFLFGLSAEQVLNYNKYGGYSSLDLYHSNM CEEEEECCEEEEEEECCCCHHHHHHCCCCCEEEEECCHHHHHCCCCCCCCCEEEEEECCC DIKRVVDDLINGFIPNLGEEGRSIYNSLTTYNDEYFVLRDFENYGQAQADINRLYRDKEK CHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCHHCCHHHHHHHHHHHHHHH WNKMSLVNIANSGFFSSDRTISEYAKDIWFKRV HCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MIKGVVFLVTISKKKFKQKFEVKMYSLYAQSIKEATDEQLLNVLCSLLKDEIAKKWVATK CCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDKKKEVYYFSLEFLIGRQLKSNLLNLNIEEEVREGLSELGINLDDLIEAEVDPALGNGG CCCCCEEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCC LGRLAACFLDSMASLNISGQGYGIRYKYGLFEQKFVNGYQVEVPDNWLTEGRYAWETVRP HHHHHHHHHHHHHHEEECCCCCEEEEECCCHHHHHCCCEEEECCCCCHHCCCEEEEECCC NEATMVKFGGEVELIKEGSHLKVIHKNYLPVMAMPYDIPIIGYQNQCINTLRLFKSEIPK CCCEEEEECCEEEEEECCCEEEEEECCCCCEEECCCCCEEECCCHHHHHHHHHHHHHCCC RDFGELTSNALNYSGSYEEALKHKYYTEEISQVLYPDDSNYAGKLLRLKQEYFFVSAGIQ CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH DIIRKYKKNKLNINNLFDKVAIHINDTHPTLCIPELMRILLDEENLSWDEAWEITKKTVS HHHHHHHCCCCCHHHHHEEEEEEECCCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHH YTNHTIMSEAMEKWPVSMMKELLPRIYMIIEEINRRYVEELNNKGYDQDRIKRMSIIDCD HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEEEEECC NINMANLCIVTSHSVNGVAKLHTHILETEVLKDFYQDEPNKFNNKTNGIAHRRWLISSNP CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCC QLSNLITDLIGDSWKKDTLQLKNIEKFKNDSSVLQRLDDIKYNNKANLAKFIKDKYDLNV HHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC DPSSIFDVQVKRLHAYKRQLLNIFNVLHMYHELLDNPNLNLDPRTFIFGAKAAPGYYLAK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHH CIIKFINSVASTINNDVRVKDKLKVVFLENYGVSLAEIIIPAANVSEQISTTTKEASGTS HHHHHHHHHHHHHCCCCEEECCEEEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHCCCCC NMKFMMNGAITLATLDGANVEICEQVGKENMFLFGLSAEQVLNYNKYGGYSSLDLYHSNM CEEEEECCEEEEEEECCCCHHHHHHCCCCCEEEEECCHHHHHCCCCCCCCCEEEEEECCC DIKRVVDDLINGFIPNLGEEGRSIYNSLTTYNDEYFVLRDFENYGQAQADINRLYRDKEK CHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCHHCCHHHHHHHHHHHHHHH WNKMSLVNIANSGFFSSDRTISEYAKDIWFKRV HCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8145641; 9387221; 9384377 [H]