| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is floX [H]
Identifier: 126698390
GI number: 126698390
Start: 982712
End: 983200
Strand: Direct
Name: floX [H]
Synonym: CD0810
Alternate gene names: 126698390
Gene position: 982712-983200 (Clockwise)
Preceding gene: 126698389
Following gene: 126698391
Centisome position: 22.91
GC content: 33.33
Gene sequence:
>489_bases TTGAAGATTACAGTATTATACCAAACAAGAAGTGGAAACACAGAAAGGGTCGCTAAGCTGATAGAAGAGGGCGCTAAAAA GGTGGATGGAGTAGATGTAAAGCTTATGAGACTTGATAATATTGATTTAGATTATTTAAATGAAAGTAAAGCAGTAATAT TTGGAACACCTACTTATTTAGCAAATACAACTTGGGAAGTAAAAAAATGGTTTGATGAAGATTCAAAAAAAGTTAATTTA GCTGGAAAATTAGGAGCTGTTTTTGCTACATGTGATTATATATGTGGAGGTCCAGATGTTGCGATACTTACTATAGTAGG ACATTTGATGGTTAAAGGTATGCTTGTGTATTCTGGAGGTGGTTCTTTAGGAAAGCCATTTATACATTTAGGACATGTAC ATTCAATTGAAGGTCCAGAGTTACAAGATGAGAAGGCTATAATATTTGGTGAAAGAATTGCTACTAAGGCAAAAGAACTA TTTGCTTAA
Upstream 100 bases:
>100_bases TAATAAAAAAATAATCGATTAGCTCTTTGTAGGACAGCAAAATTAGTGATATAATTTGATGTATAATAAATTATTTTTAT TAGATAAGGGGGAATTAAAG
Downstream 100 bases:
>100_bases TTTCTATATGCATAATAATGATTAGAGTAAATTTAGGGTTTTAAGGGAGATTTGAAGTAAAAGTTATAAAATAAAAAATT TTCCATAAAATTACTCAAGA
Product: flavodoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MKITVLYQTRSGNTERVAKLIEEGAKKVDGVDVKLMRLDNIDLDYLNESKAVIFGTPTYLANTTWEVKKWFDEDSKKVNL AGKLGAVFATCDYICGGPDVAILTIVGHLMVKGMLVYSGGGSLGKPFIHLGHVHSIEGPELQDEKAIIFGERIATKAKEL FA
Sequences:
>Translated_162_residues MKITVLYQTRSGNTERVAKLIEEGAKKVDGVDVKLMRLDNIDLDYLNESKAVIFGTPTYLANTTWEVKKWFDEDSKKVNL AGKLGAVFATCDYICGGPDVAILTIVGHLMVKGMLVYSGGGSLGKPFIHLGHVHSIEGPELQDEKAIIFGERIATKAKEL FA >Mature_162_residues MKITVLYQTRSGNTERVAKLIEEGAKKVDGVDVKLMRLDNIDLDYLNESKAVIFGTPTYLANTTWEVKKWFDEDSKKVNL AGKLGAVFATCDYICGGPDVAILTIVGHLMVKGMLVYSGGGSLGKPFIHLGHVHSIEGPELQDEKAIIFGERIATKAKEL FA
Specific function: Low-potential electron donor to a number of redox enzymes [H]
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008254 - InterPro: IPR001226 [H]
Pfam domain/function: PF00258 Flavodoxin_1 [H]
EC number: NA
Molecular weight: Translated: 17744; Mature: 17744
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: PS00201 FLAVODOXIN ; PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITVLYQTRSGNTERVAKLIEEGAKKVDGVDVKLMRLDNIDLDYLNESKAVIFGTPTYL CEEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEECCCCEEEEECCHHH ANTTWEVKKWFDEDSKKVNLAGKLGAVFATCDYICGGPDVAILTIVGHLMVKGMLVYSGG CCCCHHHHHHCCCCCCEEEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEEEECC GSLGKPFIHLGHVHSIEGPELQDEKAIIFGERIATKAKELFA CCCCCCEEEECCEECCCCCCCCCCCEEEEHHHHHHHHHHHCC >Mature Secondary Structure MKITVLYQTRSGNTERVAKLIEEGAKKVDGVDVKLMRLDNIDLDYLNESKAVIFGTPTYL CEEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEECCCCEEEEECCHHH ANTTWEVKKWFDEDSKKVNLAGKLGAVFATCDYICGGPDVAILTIVGHLMVKGMLVYSGG CCCCHHHHHHCCCCCCEEEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEEEECC GSLGKPFIHLGHVHSIEGPELQDEKAIIFGERIATKAKELFA CCCCCCEEEECCEECCCCCCCCCCCEEEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1991710 [H]