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The map label for this gene is ynbA [H]

Identifier: 126698368

GI number: 126698368

Start: 960647

End: 961930

Strand: Direct

Name: ynbA [H]

Synonym: CD0788

Alternate gene names: 126698368

Gene position: 960647-961930 (Clockwise)

Preceding gene: 126698366

Following gene: 126698369

Centisome position: 22.39

GC content: 30.53

Gene sequence:

>1284_bases
GTGAAAGAAATTCAAGAAAAAGCACTTCTTGTAGGTCTGAATTTGACTACAATAGTGAAAAAAAATGATGATATAGACAC
TAATGAATCTATGGAAGAATTAAAAGAACTAACAAAAGCTGCTGGGGCAGAAGTTGTAGGTAGCTTAATTCAAAATAAAC
ACTCTGTAGATGCAGCTTATTATATAGGAAAAGGTAAAGTAGAAGAAATAAGAGCCTATAGTGACTCTTTAGATGCTACT
TTAGTAATTTTTAATGATGAATTATCTGGTGCTCAAATCAGAAATATAGAGAATGTTGTTGGAAGAAAAGTAATAGATAG
AACTACTTTAATTTTAGATATATTTGCTCAAAGGGCACTTAGCAAAGAAGGTAAATTACAAGTTGAATTAGCACAATTAA
AATATAGATTGCCACGACTTTATGGAATGGGTGGTGAGATGAGTAGAACAGGTGCAGGGATTGGTACTAGAGGTCCTGGA
GAACAAAAACTAGAAATAGATAAGAGACATATACTTAATAAAGCAGCAGATATAAGACGTGAACTTAAAGAAGTAAAAAA
GAATAGAGAGACACAGAGAGTTAAGCGTTTAAAGTCAAATATACCGATTGTAGCACTTGTTGGGTATACAAATGCAGGAA
AATCTACCCTGTTGAACGAATTAATAAAGACACACAAGGATTATGAACAAGAAAAAGAAGTTTTTGTAAAAGATATGCTT
TTTGCAACTTTAGATGTAACCTTGAGAAAGGCTCTTTTGCCGAATAAAAAAGAATTTTTAGTAGTAGATACTGTTGGATT
TGTAAGTAAACTTCCCCATGATTTAGTAGAAGCGTTTAAGGCAACATTGGAAGAAGTACAGTATGCAGATTTAATCTTAC
ATGTAATTGATGCAACAAATACTAGTTATGAATTGCAAAAAAGTACGACTGAAGGTGTATTAAAAGAACTTGGTGTAAAT
GATAAAAAACATATACTTGTATATAATAAAGTGGACAAGCTAGAATTGGATATATATCCTAAAAGTCAAGAAGATATTGT
GTATATTTCTGCAAAACAAGGCATAAATATGGATAAGTTATTAAATATGATAGAAATTGCTTTAATGGAAAATACTTATT
CAGTAAGTTTGATGTTACCTTATGAGAGAGGTGATATATTTAGTAGAATAAAAGATAAATATAATGTGGAGAATTTTGAG
TATGGGGAAAGTGGTATAACGCTAGATGTAGATTTAGATGAAGAAGATTTTAATATCTATAGAGAGTACATACTAGAAAA
ATAG

Upstream 100 bases:

>100_bases
GTATTAATGGTATAATTAGTCAACAGAAAAATAATGTAAAAATAATGTAAGTGTATTTTGTAATTAGAATATGTTTTATA
ACAAAAAATGAGGTGATTAA

Downstream 100 bases:

>100_bases
GTTGAATATGGATATAAACTGGGAAAATATAGATAATCTTGAAGATTATTTTATAACCTATCTTCTTTATAAAGAATCTA
AAACAGTATCTCAAATTAGT

Product: ATP/GTP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MKEIQEKALLVGLNLTTIVKKNDDIDTNESMEELKELTKAAGAEVVGSLIQNKHSVDAAYYIGKGKVEEIRAYSDSLDAT
LVIFNDELSGAQIRNIENVVGRKVIDRTTLILDIFAQRALSKEGKLQVELAQLKYRLPRLYGMGGEMSRTGAGIGTRGPG
EQKLEIDKRHILNKAADIRRELKEVKKNRETQRVKRLKSNIPIVALVGYTNAGKSTLLNELIKTHKDYEQEKEVFVKDML
FATLDVTLRKALLPNKKEFLVVDTVGFVSKLPHDLVEAFKATLEEVQYADLILHVIDATNTSYELQKSTTEGVLKELGVN
DKKHILVYNKVDKLELDIYPKSQEDIVYISAKQGINMDKLLNMIEIALMENTYSVSLMLPYERGDIFSRIKDKYNVENFE
YGESGITLDVDLDEEDFNIYREYILEK

Sequences:

>Translated_427_residues
MKEIQEKALLVGLNLTTIVKKNDDIDTNESMEELKELTKAAGAEVVGSLIQNKHSVDAAYYIGKGKVEEIRAYSDSLDAT
LVIFNDELSGAQIRNIENVVGRKVIDRTTLILDIFAQRALSKEGKLQVELAQLKYRLPRLYGMGGEMSRTGAGIGTRGPG
EQKLEIDKRHILNKAADIRRELKEVKKNRETQRVKRLKSNIPIVALVGYTNAGKSTLLNELIKTHKDYEQEKEVFVKDML
FATLDVTLRKALLPNKKEFLVVDTVGFVSKLPHDLVEAFKATLEEVQYADLILHVIDATNTSYELQKSTTEGVLKELGVN
DKKHILVYNKVDKLELDIYPKSQEDIVYISAKQGINMDKLLNMIEIALMENTYSVSLMLPYERGDIFSRIKDKYNVENFE
YGESGITLDVDLDEEDFNIYREYILEK
>Mature_427_residues
MKEIQEKALLVGLNLTTIVKKNDDIDTNESMEELKELTKAAGAEVVGSLIQNKHSVDAAYYIGKGKVEEIRAYSDSLDAT
LVIFNDELSGAQIRNIENVVGRKVIDRTTLILDIFAQRALSKEGKLQVELAQLKYRLPRLYGMGGEMSRTGAGIGTRGPG
EQKLEIDKRHILNKAADIRRELKEVKKNRETQRVKRLKSNIPIVALVGYTNAGKSTLLNELIKTHKDYEQEKEVFVKDML
FATLDVTLRKALLPNKKEFLVVDTVGFVSKLPHDLVEAFKATLEEVQYADLILHVIDATNTSYELQKSTTEGVLKELGVN
DKKHILVYNKVDKLELDIYPKSQEDIVYISAKQGINMDKLLNMIEIALMENTYSVSLMLPYERGDIFSRIKDKYNVENFE
YGESGITLDVDLDEEDFNIYREYILEK

Specific function: Unknown

COG id: COG2262

COG function: function code R; GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI310133118, Length=226, Percent_Identity=35.8407079646018, Blast_Score=143, Evalue=3e-34,
Organism=Homo sapiens, GI310133116, Length=226, Percent_Identity=35.8407079646018, Blast_Score=142, Evalue=5e-34,
Organism=Homo sapiens, GI310124269, Length=218, Percent_Identity=36.2385321100917, Blast_Score=142, Evalue=7e-34,
Organism=Homo sapiens, GI310124267, Length=218, Percent_Identity=36.2385321100917, Blast_Score=142, Evalue=7e-34,
Organism=Homo sapiens, GI310124171, Length=218, Percent_Identity=36.2385321100917, Blast_Score=142, Evalue=7e-34,
Organism=Homo sapiens, GI310124169, Length=218, Percent_Identity=36.2385321100917, Blast_Score=142, Evalue=7e-34,
Organism=Escherichia coli, GI1790615, Length=420, Percent_Identity=39.0476190476191, Blast_Score=270, Evalue=9e-74,
Organism=Caenorhabditis elegans, GI17561038, Length=290, Percent_Identity=32.7586206896552, Blast_Score=135, Evalue=5e-32,
Organism=Drosophila melanogaster, GI24650079, Length=326, Percent_Identity=34.3558282208589, Blast_Score=139, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016496
- InterPro:   IPR006073
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 48486; Mature: 48486

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEIQEKALLVGLNLTTIVKKNDDIDTNESMEELKELTKAAGAEVVGSLIQNKHSVDAAY
CCCHHHCCEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
YIGKGKVEEIRAYSDSLDATLVIFNDELSGAQIRNIENVVGRKVIDRTTLILDIFAQRAL
EECCCCHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKEGKLQVELAQLKYRLPRLYGMGGEMSRTGAGIGTRGPGEQKLEIDKRHILNKAADIRR
CCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ELKEVKKNRETQRVKRLKSNIPIVALVGYTNAGKSTLLNELIKTHKDYEQEKEVFVKDML
HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHH
FATLDVTLRKALLPNKKEFLVVDTVGFVSKLPHDLVEAFKATLEEVQYADLILHVIDATN
HHHHHHHHHHHHCCCCCCEEEEECHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TSYELQKSTTEGVLKELGVNDKKHILVYNKVDKLELDIYPKSQEDIVYISAKQGINMDKL
CCEEEHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCCCCCEEEEECCCCCCHHHH
LNMIEIALMENTYSVSLMLPYERGDIFSRIKDKYNVENFEYGESGITLDVDLDEEDFNIY
HHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCEECCCCEEEEEECCCHHHHHH
REYILEK
HHHHCCC
>Mature Secondary Structure
MKEIQEKALLVGLNLTTIVKKNDDIDTNESMEELKELTKAAGAEVVGSLIQNKHSVDAAY
CCCHHHCCEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
YIGKGKVEEIRAYSDSLDATLVIFNDELSGAQIRNIENVVGRKVIDRTTLILDIFAQRAL
EECCCCHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKEGKLQVELAQLKYRLPRLYGMGGEMSRTGAGIGTRGPGEQKLEIDKRHILNKAADIRR
CCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ELKEVKKNRETQRVKRLKSNIPIVALVGYTNAGKSTLLNELIKTHKDYEQEKEVFVKDML
HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHH
FATLDVTLRKALLPNKKEFLVVDTVGFVSKLPHDLVEAFKATLEEVQYADLILHVIDATN
HHHHHHHHHHHHCCCCCCEEEEECHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TSYELQKSTTEGVLKELGVNDKKHILVYNKVDKLELDIYPKSQEDIVYISAKQGINMDKL
CCEEEHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCCCCCEEEEECCCCCCHHHH
LNMIEIALMENTYSVSLMLPYERGDIFSRIKDKYNVENFEYGESGITLDVDLDEEDFNIY
HHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCEECCCCEEEEEECCCHHHHHH
REYILEK
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]