Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

Click here to switch to the map view.

The map label for this gene is 126698366

Identifier: 126698366

GI number: 126698366

Start: 959381

End: 960028

Strand: Direct

Name: 126698366

Synonym: CD0786

Alternate gene names: NA

Gene position: 959381-960028 (Clockwise)

Preceding gene: 126698365

Following gene: 126698368

Centisome position: 22.36

GC content: 20.68

Gene sequence:

>648_bases
ATGAAAAAGTTTCTAAATGTACTTTTTTCAATTTGTATTAGTATTGTTATAATAGTAGGTGTTATTAATTTTACTGTTGG
ATTTAAACAACTTTATTATTTTGACATTGATTACTTAAATATATCAGAGTTATCTGGTTTATCTAAAGATGATATAAAAT
TGAACTACGATTATCTAATTGATTATAACTTAAATAAGAATGTGTCTGAGTTCAAATTACCAACATTAAAATCTTCTCCA
CAAGGGAAGATACATTTTGAAGAAGTCAGGAATATATTTCAAAATATAAATAAATTAGCTAAATTATTATTGGTAGTTTC
TTTAGTAGGAATTATATTGAGTGTAAAAAATAAAAATATAAAAATCTTAAAAACTACATCAATAACACTTATAATTATGC
CATTATTATTAACAGTTCCAATTTTATTAAATTTTGAAAAGTCATTTATTATTTTTCATAAATTATTATTTAGAAATGAT
TATTGGATATTTAATCCCGATTTAGACCCAGTTATAAATATATTGCCAGAGGAATTTTTTTTTCACTCTGGAATGATGAT
TTTAATATTAATTTTGTTAGTAAGTATAGTACTGTTTGTAATGTATAAATTATGTAAATCTTTATCAATAAAAATATTTC
AATGTTAA

Upstream 100 bases:

>100_bases
GAGCCAGAATTTTATTCAGAAATTGTTGATGATGTATGGAATATAGAAGATTTTACAACTAAAATCGTGTAGTGATTTAA
CTTATTGCTGGGGGGATTTC

Downstream 100 bases:

>100_bases
ATAGAGGGATATTTTTATTTCCAAAATAAGATAATAAAAAAGGATTAGATTAAAAGTTATACAATAAAAATAGCTGTGCA
ATAATATTTAGACTATGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MKKFLNVLFSICISIVIIVGVINFTVGFKQLYYFDIDYLNISELSGLSKDDIKLNYDYLIDYNLNKNVSEFKLPTLKSSP
QGKIHFEEVRNIFQNINKLAKLLLVVSLVGIILSVKNKNIKILKTTSITLIIMPLLLTVPILLNFEKSFIIFHKLLFRND
YWIFNPDLDPVINILPEEFFFHSGMMILILILLVSIVLFVMYKLCKSLSIKIFQC

Sequences:

>Translated_215_residues
MKKFLNVLFSICISIVIIVGVINFTVGFKQLYYFDIDYLNISELSGLSKDDIKLNYDYLIDYNLNKNVSEFKLPTLKSSP
QGKIHFEEVRNIFQNINKLAKLLLVVSLVGIILSVKNKNIKILKTTSITLIIMPLLLTVPILLNFEKSFIIFHKLLFRND
YWIFNPDLDPVINILPEEFFFHSGMMILILILLVSIVLFVMYKLCKSLSIKIFQC
>Mature_215_residues
MKKFLNVLFSICISIVIIVGVINFTVGFKQLYYFDIDYLNISELSGLSKDDIKLNYDYLIDYNLNKNVSEFKLPTLKSSP
QGKIHFEEVRNIFQNINKLAKLLLVVSLVGIILSVKNKNIKILKTTSITLIIMPLLLTVPILLNFEKSFIIFHKLLFRND
YWIFNPDLDPVINILPEEFFFHSGMMILILILLVSIVLFVMYKLCKSLSIKIFQC

Specific function: Unknown

COG id: COG4478

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24951; Mature: 24951

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFLNVLFSICISIVIIVGVINFTVGFKQLYYFDIDYLNISELSGLSKDDIKLNYDYLI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHCCCCCCCEEEEEEEEE
DYNLNKNVSEFKLPTLKSSPQGKIHFEEVRNIFQNINKLAKLLLVVSLVGIILSVKNKNI
EECCCCCHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
KILKTTSITLIIMPLLLTVPILLNFEKSFIIFHKLLFRNDYWIFNPDLDPVINILPEEFF
EEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHH
FHSGMMILILILLVSIVLFVMYKLCKSLSIKIFQC
HHCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC
>Mature Secondary Structure
MKKFLNVLFSICISIVIIVGVINFTVGFKQLYYFDIDYLNISELSGLSKDDIKLNYDYLI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHCCCCCCCEEEEEEEEE
DYNLNKNVSEFKLPTLKSSPQGKIHFEEVRNIFQNINKLAKLLLVVSLVGIILSVKNKNI
EECCCCCHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
KILKTTSITLIIMPLLLTVPILLNFEKSFIIFHKLLFRNDYWIFNPDLDPVINILPEEFF
EEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHH
FHSGMMILILILLVSIVLFVMYKLCKSLSIKIFQC
HHCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA