| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698308
Identifier: 126698308
GI number: 126698308
Start: 890080
End: 892206
Strand: Direct
Name: 126698308
Synonym: CD0728
Alternate gene names: NA
Gene position: 890080-892206 (Clockwise)
Preceding gene: 126698307
Following gene: 126698309
Centisome position: 20.75
GC content: 35.64
Gene sequence:
>2127_bases ATGAATCTATATAATATAATCTTTACAGGGTCAGAACAAGCTTTAGGTGCGGCTCAAGCTATGTTAGCTGAAGCTATAGA AAAGAATGGAAAAGAGCATAAAGTTGCTTTCCCTGATACAGCATATTCATTACCTTGTATATATGCTGCAACAGGACAAA AGATGAACACTTTAGGGGACTTAGAAGGTGCTTTAGAAGTAGTAAAATCTTTAATAAATAGAACTCATTTACTAGAACAT GCTTTTAATGCTGGTTTAGCTACAGCTTTAGCAGCAGAAGTAATTGAAGCATTAAAATATTCAACTATGGATGCTCCATA TAGTGAGCCATGTGCAGGTCATATAACTGACCCTATAATCAGATCACTTGGTGTACCATTAGTTACAGGAGATATACCTG GTGTTGCAGTTGTTCTTGGTGAGTGTCCAGATGCAGAATCAGCAGCAAAAGTTATAAAAGATTACCAATCTAAAGGTTTA CTAACTTTCTTAGTTGGTAAAGTTATAGACCAAGCTATAGAAGCTGGAGTAAAAATGGGTCTTGAGCTAAGAGTTATACC TCTAGGATATGATGTAACTTCTGTTATACACGTTGTATCTGTTGCAGTAAGAGCAGCATTAATATTCGGTGGATTAACTC CTGGTGATTTAAACGGATTATTAGAGTACACAGCTAATAGAGTTCCTGCATTTGTTAATGCATTTGGACCATTAAGTGAA TTAGTTGTATCTGCAGGTGCTGGAGCAATAGCTTTAGGATTCCCAGTTATAACTGACCAAACAGTTCTTGAAGTTCCAAT GAACCTATTAACTCAAAAAGATTACGATAAGATAGTAGCTACTTCATTAGAAGCTAGAGGAATAAAAATAAAAGTTACTG AAATACCTATCCCAGTTTCATTTGCAGCAGCATTTGAAGGTGAGAGAATTAGAAAGAGCGATATGTTTGCTGAGTTTGGT GGAAACAGAACTGAAGCTTGGGAGCTTGTTGTTAAGAAAGAAGCAACAGAAGTTGAAGACCATAAGATAGAAATAATAGG ACCAAATATAGATGAAGTTGATGCAGATGGTGTATTAAGATTACCACTTGCTGTAATAGTTAAAATAGCTGGTAAAAATA TGCAAGAAGATTTCGAGCCAGTTCTTGAAAGACGTTTCCACTACTTCTTAAACTATATAGAAGGTGTAATGCACGTTGGA CAAAGAGATATGGCTTGGGTAAGAATCTCTAAAGATGCATTTGATAAAGGATTTAGACTTGAGCATATAGGAGAAGTTTT ATATGCTAAGATGTTAGATGAATTTGAATCAGTAGTTGATAAGTGTGAAATAACTATAATTACAGATGCTGAAAAAGTTT CTGAATTAAAAGGTGAAGCAATAGCTAAGTACAATGCTAGAGATGAAAGATTAGCTTCATTAGTTGATGAAAGTGTTGAC ACTTTCTATTCTTGTAACTTATGTCAATCATTTGCACCAGCTCACGTTTGTGTTGTTACTCCTGAAAGACTTGGTCTTTG TGGAGCAGTTAGCTGGTTAGATGCTAAGGCTACTAAAGAATTAGACCCAACAGGTCCTTGTCAACCAATAGAAAAAGGCG AGTGCTTAGATGATAGAACAGGTGTATGGAATTCAGTAAATGAAACTGTAAACCAAATATCTCAAGGTGCAGTTGAATCT GTTACATTATACTCTATACTAGAAGACCCAATGACTTCTTGTGGATGCTTCGAATGTATCTGTGGTATAATGCCAGAAGC AAATGGATTTGTTGTAGTTAACAGAGAATTTGCAAGTGTTACTCCAGTTGGTATGACTTTCGGAGAACTTGCTTCTATGA CAGGTGGAGGAGTTCAAACTCCAGGATTTATGGGACACGGAAGACATTTCATATCTTCTAAAAAATTCGCTTATGCAGAA GGTGGACCAGAAAGAATAGTTTGGATGCCAAAAGAATTAAAAGATTATGTAGCTGATAAATTAAATGCTACAGTTAAAGA AATGACTGGAATAGAAAACTTCTGTGATATGGTTTGTGATGAAACTATAGCTGACGATTCTGAAGGAGTATTAGCTTTCT TAGAAGAAAAAGGTCATCCAGCATTAGCTATGGAAAGTGTAATGTAA
Upstream 100 bases:
>100_bases CAGACTCTTTCTTAGAGTTAAATGAAGGTGGATTTGCTTTCTAGGGTTTTTAGGGTATAGTTAATAAAAAATAGGTGTAA ATATTAAAGGGGGAAATAGA
Downstream 100 bases:
>100_bases TTGATGGAAAATTTAAAATAATATGATATAATATTAATATGATTTAAGTAATTTAATCAATAATATAATATTGGGGGTCT ATCGAAATGAAATTATTACC
Product: bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta
Products: NA
Alternate protein names: ACS subunit; Acetyl-CoA synthase subunit; CODH/ACS [H]
Number of amino acids: Translated: 708; Mature: 708
Protein sequence:
>708_residues MNLYNIIFTGSEQALGAAQAMLAEAIEKNGKEHKVAFPDTAYSLPCIYAATGQKMNTLGDLEGALEVVKSLINRTHLLEH AFNAGLATALAAEVIEALKYSTMDAPYSEPCAGHITDPIIRSLGVPLVTGDIPGVAVVLGECPDAESAAKVIKDYQSKGL LTFLVGKVIDQAIEAGVKMGLELRVIPLGYDVTSVIHVVSVAVRAALIFGGLTPGDLNGLLEYTANRVPAFVNAFGPLSE LVVSAGAGAIALGFPVITDQTVLEVPMNLLTQKDYDKIVATSLEARGIKIKVTEIPIPVSFAAAFEGERIRKSDMFAEFG GNRTEAWELVVKKEATEVEDHKIEIIGPNIDEVDADGVLRLPLAVIVKIAGKNMQEDFEPVLERRFHYFLNYIEGVMHVG QRDMAWVRISKDAFDKGFRLEHIGEVLYAKMLDEFESVVDKCEITIITDAEKVSELKGEAIAKYNARDERLASLVDESVD TFYSCNLCQSFAPAHVCVVTPERLGLCGAVSWLDAKATKELDPTGPCQPIEKGECLDDRTGVWNSVNETVNQISQGAVES VTLYSILEDPMTSCGCFECICGIMPEANGFVVVNREFASVTPVGMTFGELASMTGGGVQTPGFMGHGRHFISSKKFAYAE GGPERIVWMPKELKDYVADKLNATVKEMTGIENFCDMVCDETIADDSEGVLAFLEEKGHPALAMESVM
Sequences:
>Translated_708_residues MNLYNIIFTGSEQALGAAQAMLAEAIEKNGKEHKVAFPDTAYSLPCIYAATGQKMNTLGDLEGALEVVKSLINRTHLLEH AFNAGLATALAAEVIEALKYSTMDAPYSEPCAGHITDPIIRSLGVPLVTGDIPGVAVVLGECPDAESAAKVIKDYQSKGL LTFLVGKVIDQAIEAGVKMGLELRVIPLGYDVTSVIHVVSVAVRAALIFGGLTPGDLNGLLEYTANRVPAFVNAFGPLSE LVVSAGAGAIALGFPVITDQTVLEVPMNLLTQKDYDKIVATSLEARGIKIKVTEIPIPVSFAAAFEGERIRKSDMFAEFG GNRTEAWELVVKKEATEVEDHKIEIIGPNIDEVDADGVLRLPLAVIVKIAGKNMQEDFEPVLERRFHYFLNYIEGVMHVG QRDMAWVRISKDAFDKGFRLEHIGEVLYAKMLDEFESVVDKCEITIITDAEKVSELKGEAIAKYNARDERLASLVDESVD TFYSCNLCQSFAPAHVCVVTPERLGLCGAVSWLDAKATKELDPTGPCQPIEKGECLDDRTGVWNSVNETVNQISQGAVES VTLYSILEDPMTSCGCFECICGIMPEANGFVVVNREFASVTPVGMTFGELASMTGGGVQTPGFMGHGRHFISSKKFAYAE GGPERIVWMPKELKDYVADKLNATVKEMTGIENFCDMVCDETIADDSEGVLAFLEEKGHPALAMESVM >Mature_708_residues MNLYNIIFTGSEQALGAAQAMLAEAIEKNGKEHKVAFPDTAYSLPCIYAATGQKMNTLGDLEGALEVVKSLINRTHLLEH AFNAGLATALAAEVIEALKYSTMDAPYSEPCAGHITDPIIRSLGVPLVTGDIPGVAVVLGECPDAESAAKVIKDYQSKGL LTFLVGKVIDQAIEAGVKMGLELRVIPLGYDVTSVIHVVSVAVRAALIFGGLTPGDLNGLLEYTANRVPAFVNAFGPLSE LVVSAGAGAIALGFPVITDQTVLEVPMNLLTQKDYDKIVATSLEARGIKIKVTEIPIPVSFAAAFEGERIRKSDMFAEFG GNRTEAWELVVKKEATEVEDHKIEIIGPNIDEVDADGVLRLPLAVIVKIAGKNMQEDFEPVLERRFHYFLNYIEGVMHVG QRDMAWVRISKDAFDKGFRLEHIGEVLYAKMLDEFESVVDKCEITIITDAEKVSELKGEAIAKYNARDERLASLVDESVD TFYSCNLCQSFAPAHVCVVTPERLGLCGAVSWLDAKATKELDPTGPCQPIEKGECLDDRTGVWNSVNETVNQISQGAVES VTLYSILEDPMTSCGCFECICGIMPEANGFVVVNREFASVTPVGMTFGELASMTGGGVQTPGFMGHGRHFISSKKFAYAE GGPERIVWMPKELKDYVADKLNATVKEMTGIENFCDMVCDETIADDSEGVLAFLEEKGHPALAMESVM
Specific function: The beta subunit generates CO from CO(2), while the alpha subunit (this protein) combines the CO with CoA and a methyl group to form acetyl-CoA. The methyl group, which is incorporated into acetyl-CoA, is transferred to the alpha subunit by a corrinoid ir
COG id: COG1614
COG function: function code C; CO dehydrogenase/acetyl-CoA synthase beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004461 - InterPro: IPR011254 - InterPro: IPR016099 [H]
Pfam domain/function: PF03598 CdhC [H]
EC number: =2.3.1.169 [H]
Molecular weight: Translated: 76589; Mature: 76589
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLYNIIFTGSEQALGAAQAMLAEAIEKNGKEHKVAFPDTAYSLPCIYAATGQKMNTLGD CCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEECCCCHHHHHH LEGALEVVKSLINRTHLLEHAFNAGLATALAAEVIEALKYSTMDAPYSEPCAGHITDPII HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH RSLGVPLVTGDIPGVAVVLGECPDAESAAKVIKDYQSKGLLTFLVGKVIDQAIEAGVKMG HHCCCCEEECCCCCEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC LELRVIPLGYDVTSVIHVVSVAVRAALIFGGLTPGDLNGLLEYTANRVPAFVNAFGPLSE CEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHCCCHHH LVVSAGAGAIALGFPVITDQTVLEVPMNLLTQKDYDKIVATSLEARGIKIKVTEIPIPVS HHHHCCCCEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEECCCCEE FAAAFEGERIRKSDMFAEFGGNRTEAWELVVKKEATEVEDHKIEIIGPNIDEVDADGVLR HHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCHH LPLAVIVKIAGKNMQEDFEPVLERRFHYFLNYIEGVMHVGQRDMAWVRISKDAFDKGFRL HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHCCCCCH EHIGEVLYAKMLDEFESVVDKCEITIITDAEKVSELKGEAIAKYNARDERLASLVDESVD HHHHHHHHHHHHHHHHHHHHHCEEEEEECHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHH TFYSCNLCQSFAPAHVCVVTPERLGLCGAVSWLDAKATKELDPTGPCQPIEKGECLDDRT HHEEHHHHHHCCCCEEEEECHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC GVWNSVNETVNQISQGAVESVTLYSILEDPMTSCGCFECICGIMPEANGFVVVNREFASV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEEECCCCCC TPVGMTFGELASMTGGGVQTPGFMGHGRHFISSKKFAYAEGGPERIVWMPKELKDYVADK CCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHCCCCEEECCCCCCEEEECCHHHHHHHHHH LNATVKEMTGIENFCDMVCDETIADDSEGVLAFLEEKGHPALAMESVM HHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHEECCCCCCCHHHHHCC >Mature Secondary Structure MNLYNIIFTGSEQALGAAQAMLAEAIEKNGKEHKVAFPDTAYSLPCIYAATGQKMNTLGD CCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEECCCCHHHHHH LEGALEVVKSLINRTHLLEHAFNAGLATALAAEVIEALKYSTMDAPYSEPCAGHITDPII HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH RSLGVPLVTGDIPGVAVVLGECPDAESAAKVIKDYQSKGLLTFLVGKVIDQAIEAGVKMG HHCCCCEEECCCCCEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC LELRVIPLGYDVTSVIHVVSVAVRAALIFGGLTPGDLNGLLEYTANRVPAFVNAFGPLSE CEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHCCCHHH LVVSAGAGAIALGFPVITDQTVLEVPMNLLTQKDYDKIVATSLEARGIKIKVTEIPIPVS HHHHCCCCEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEECCCCEE FAAAFEGERIRKSDMFAEFGGNRTEAWELVVKKEATEVEDHKIEIIGPNIDEVDADGVLR HHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCHH LPLAVIVKIAGKNMQEDFEPVLERRFHYFLNYIEGVMHVGQRDMAWVRISKDAFDKGFRL HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHCCCCCH EHIGEVLYAKMLDEFESVVDKCEITIITDAEKVSELKGEAIAKYNARDERLASLVDESVD HHHHHHHHHHHHHHHHHHHHHCEEEEEECHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHH TFYSCNLCQSFAPAHVCVVTPERLGLCGAVSWLDAKATKELDPTGPCQPIEKGECLDDRT HHEEHHHHHHCCCCEEEEECHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC GVWNSVNETVNQISQGAVESVTLYSILEDPMTSCGCFECICGIMPEANGFVVVNREFASV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEEECCCCCC TPVGMTFGELASMTGGGVQTPGFMGHGRHFISSKKFAYAEGGPERIVWMPKELKDYVADK CCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHCCCCEEECCCCCCEEEECCHHHHHHHHHH LNATVKEMTGIENFCDMVCDETIADDSEGVLAFLEEKGHPALAMESVM HHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHEECCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1748656 [H]