Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698304

Identifier: 126698304

GI number: 126698304

Start: 886035

End: 886805

Strand: Direct

Name: 126698304

Synonym: CD0724

Alternate gene names: NA

Gene position: 886035-886805 (Clockwise)

Preceding gene: 126698303

Following gene: 126698305

Centisome position: 20.65

GC content: 33.46

Gene sequence:

>771_bases
ATGGGATACAATATAGCTGTTGCAGGAAAAGGTGGAACTGGTAAAACAAGTCTCACAGGGCTTTTGATTGATTATTTGGT
TAAGGACAAAAAGGGACCAGTATTAGTTGTAGATGCTGATGCCAATGCTAACATAAATGAAGTATTAGGTATCGAAGTTG
AAGCAACAATAGGAGAAATAAGAGAAGAAGTAAATCAAAGAGAAAAGTTAGGCAATGCATTCCCTGGTGGTATGACAAAG
GCACAATATCTTCAATTTAGATTAAATTCTATAATTGAAGAAGGCGAAGGATATGACTTATTAGTAATGGGTAGGTCAGA
AGGTGAAGGATGTTACTGTTTTGTAAATGGGATACTTAGAGAACAAGTAAACAAAATATCTGGTCATTACAAATACTTAG
TCATGGACAACGAAGCTGGTATGGAACATCTAAGTAGAAAAGTCACTAGACATGTTGATACACTTTTATTGGTTAGTGAT
TGCTCAAGACGTAGCATACAAGCTGTTGCTAGAATAAGAGATTTAGCTGAGGAACTAAAGTTAAGTGTTGGAAGAATACT
TTTGATTGTAAATAAAGTTCCAAATGGGGTTATGAATGATGGTGTTAAAGAAGAAATTGAAAAGCATAACCTAGAGCTAA
TCGGTGTTGTACCTATGGATGAATTGATATATGAATATGATTCTACAGGTATTCCTTTAGTTAATTTACCTGAAGATTCA
AAATCTAAAGTGGCTATGAAAGAAATTTTTGCTAAATTAGAATTAAAATAG

Upstream 100 bases:

>100_bases
CATGATGTACATGGAGAATGTGTTCATTCTGTACCTAAATTATAATAGACAGACAGAGTACATAAGGCTCTGTGGCTAGA
TTTAAGGGGGAAGTCTTAAA

Downstream 100 bases:

>100_bases
GCTTAAGGGGGAAAAAAATATGGCATTTAAAATGTCTACTCAAAAATATTCTGGAAAAATATCAGAAGTTGAAGTAGGAA
TAGGGGAAAAAGCAATTAAA

Product: carbon monoxide dehydrogenase/acetyl-CoA synthase complex, nickel-inserting subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MGYNIAVAGKGGTGKTSLTGLLIDYLVKDKKGPVLVVDADANANINEVLGIEVEATIGEIREEVNQREKLGNAFPGGMTK
AQYLQFRLNSIIEEGEGYDLLVMGRSEGEGCYCFVNGILREQVNKISGHYKYLVMDNEAGMEHLSRKVTRHVDTLLLVSD
CSRRSIQAVARIRDLAEELKLSVGRILLIVNKVPNGVMNDGVKEEIEKHNLELIGVVPMDELIYEYDSTGIPLVNLPEDS
KSKVAMKEIFAKLELK

Sequences:

>Translated_256_residues
MGYNIAVAGKGGTGKTSLTGLLIDYLVKDKKGPVLVVDADANANINEVLGIEVEATIGEIREEVNQREKLGNAFPGGMTK
AQYLQFRLNSIIEEGEGYDLLVMGRSEGEGCYCFVNGILREQVNKISGHYKYLVMDNEAGMEHLSRKVTRHVDTLLLVSD
CSRRSIQAVARIRDLAEELKLSVGRILLIVNKVPNGVMNDGVKEEIEKHNLELIGVVPMDELIYEYDSTGIPLVNLPEDS
KSKVAMKEIFAKLELK
>Mature_255_residues
GYNIAVAGKGGTGKTSLTGLLIDYLVKDKKGPVLVVDADANANINEVLGIEVEATIGEIREEVNQREKLGNAFPGGMTKA
QYLQFRLNSIIEEGEGYDLLVMGRSEGEGCYCFVNGILREQVNKISGHYKYLVMDNEAGMEHLSRKVTRHVDTLLLVSDC
SRRSIQAVARIRDLAEELKLSVGRILLIVNKVPNGVMNDGVKEEIEKHNLELIGVVPMDELIYEYDSTGIPLVNLPEDSK
SKVAMKEIFAKLELK

Specific function: Unknown

COG id: COG3640

COG function: function code D; CO dehydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0084 and MJ0823 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR014433 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 28266; Mature: 28135

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYNIAVAGKGGTGKTSLTGLLIDYLVKDKKGPVLVVDADANANINEVLGIEVEATIGEI
CCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHEEEEEEHHHHHHH
REEVNQREKLGNAFPGGMTKAQYLQFRLNSIIEEGEGYDLLVMGRSEGEGCYCFVNGILR
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEHHHHHH
EQVNKISGHYKYLVMDNEAGMEHLSRKVTRHVDTLLLVSDCSRRSIQAVARIRDLAEELK
HHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHEEHHCCHHHHHHHHHHHHHHHHHH
LSVGRILLIVNKVPNGVMNDGVKEEIEKHNLELIGVVPMDELIYEYDSTGIPLVNLPEDS
HHHCCEEEEEECCCCCCCCCCHHHHHHHCCCEEEEECCHHHHHHHHCCCCCCEEECCCCC
KSKVAMKEIFAKLELK
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GYNIAVAGKGGTGKTSLTGLLIDYLVKDKKGPVLVVDADANANINEVLGIEVEATIGEI
CCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHEEEEEEHHHHHHH
REEVNQREKLGNAFPGGMTKAQYLQFRLNSIIEEGEGYDLLVMGRSEGEGCYCFVNGILR
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEHHHHHH
EQVNKISGHYKYLVMDNEAGMEHLSRKVTRHVDTLLLVSDCSRRSIQAVARIRDLAEELK
HHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHEEHHCCHHHHHHHHHHHHHHHHHH
LSVGRILLIVNKVPNGVMNDGVKEEIEKHNLELIGVVPMDELIYEYDSTGIPLVNLPEDS
HHHCCEEEEEECCCCCCCCCCHHHHHHHCCCEEEEECCHHHHHHHHCCCCCCEEECCCCC
KSKVAMKEIFAKLELK
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]