| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is fhs
Identifier: 126698298
GI number: 126698298
Start: 879545
End: 881221
Strand: Direct
Name: fhs
Synonym: CD0718
Alternate gene names: 126698298
Gene position: 879545-881221 (Clockwise)
Preceding gene: 126698297
Following gene: 126698299
Centisome position: 20.5
GC content: 35.3
Gene sequence:
>1677_bases ATGGGATTTAAATCTGACATTGAAATAGCTCAAGAAGCTAAGCCTCAAGATATTAGAGAGGTTGCAAAAAAATTAGGACT AGGTGAAGATGATGTAGAACTTTATGGTAAATACAAAGCAAAAGTTGACTACAATCTACTAAAAAGAGAGACTGGTAAAA AAGCTAAGTTAATACTAACTACAGCTATAAACCCAACTCCAGCAGGTGAAGGAAAAACTACTACTACTATAGGTGTTGCT GATGCATTTGCTAAACTAGACAAAAATGTATTAGTTGCTTTAAGAGAACCATCTCTAGGACCAGTATTTGGTGTTAAAGG TGGAGCAGCTGGTGGAGGATATGCACAAGTTGTTCCTATGGAAGATATAAACTTACACTTCACAGGAGATTTTCACGCTA TAGGAGCTGCTAACAATCTTTTAGCTGCTATGCTTGATAACCATATTCACCAAGGAAATGCACTTAGAATAGACCCTAAG AAAATAACTTGGAGAAGATGTGTAGACATGAACGATAGACAACTTAGAAATATCGTTGATGGTATGGGTAAAAAAGGTGA TGGAGCAGTTAGACAAGATGGATTCGATATAACTGTTGCTTCTGAAATAATGGCAGCGTTCTGTTTGGCAAGTGATATAT CTGATTTAAAAGAAAGATTAGGAAACATAATAGTTGGATACAGCTACGAAGGTGAACCTGTAACAGCTAGACAATTAAAA GCTAATGGTGCTATGGCTGCATTATTAAAAGATGCTTTAAAACCAAACCTAGTTCAAACTCTTGAAGGAACACCATCATT TGTACACGGTGGACCATTCGCAAATATAGCTCATGGATGTAACTCTGTTATAGCTACAAGAATGGCTATGCACTTTGCAG ATTATGTAATAACTGAGGCTGGTTTCGGTGCTGACCTTGGAGCAGAAAAATTCTTAGATATAAAATGTAGAATGGCAAAC TTAAAACCAGATGCTGTTATAATAGTTGCTACTGTAAGAGCATTAAAATACAATGGTGGAGTTGCTAAAGCAGACTTAAA TAACGAAAACCTAGAAGCTCTTGAAAAAGGACTTCCAAACTTATTAAAACATGTTGAAAACATAACTCAAGTATATGGAT TACCAGCAGTTGTTGCAATCAACAGATTCCCACTTGATACTGAAGCTGAACTTAAACTTGTTGAAGACAAGTGTAAGGAA TTAGGTGTTAATGTTGCTCTTTCTGAAGTATGGGCAAAAGGTGGAGAAGGTGGAATTGCAGTAGCTAAAGAAGTTTTAAG ATTATTGGATGAAGAAGAAAATAACTTTAGATTCTGCTATGAAGATGATTTATCTATAAAAGACAAGATAAATGCTATAG CTACTAAGATTTATGGAGCAGATGGTGTAGATTATACTCCTGAAGCTGATAAGGAAATAGCTAACTTAGAAAAACTTGGA TTTACTAAAGTTCCAGTATGTATGGCTAAGACTCAATATTCTTTAACTGATGACCAAACTAAATTAGGTAGACCAACAGG ATTTAGAATAACTGTAAGACAAGCAACAATTTCAGCAGGAGCTGGATTTATAGTTGCACTTACTGGAGAAATAATGAAGA TGCCAGGATTACCAAAAGTTCCAGCAGCAGAAAAAATAGATGTTGATGAAAATGGAGTAATAGCTGGATTATTCTAA
Upstream 100 bases:
>100_bases CATGTATAATTATCTTATAAAATATAATTTTTACATATTAATACAATTTTTACAAAAATTATATTTTAAATCTATTTAGG TTGTGGGAGGAGATTCAGTT
Downstream 100 bases:
>100_bases GGAAATTAATTTATAAATAAAGAGTAGGAGATATCTTAAAATAGTTCGTAAAATATCTCGAACAATTTGAGATATTTTCC TACATCCTTTCAAGGAGGAT
Product: formate--tetrahydrofolate ligase
Products: NA
Alternate protein names: Formyltetrahydrofolate synthetase; FHS; FTHFS
Number of amino acids: Translated: 558; Mature: 557
Protein sequence:
>558_residues MGFKSDIEIAQEAKPQDIREVAKKLGLGEDDVELYGKYKAKVDYNLLKRETGKKAKLILTTAINPTPAGEGKTTTTIGVA DAFAKLDKNVLVALREPSLGPVFGVKGGAAGGGYAQVVPMEDINLHFTGDFHAIGAANNLLAAMLDNHIHQGNALRIDPK KITWRRCVDMNDRQLRNIVDGMGKKGDGAVRQDGFDITVASEIMAAFCLASDISDLKERLGNIIVGYSYEGEPVTARQLK ANGAMAALLKDALKPNLVQTLEGTPSFVHGGPFANIAHGCNSVIATRMAMHFADYVITEAGFGADLGAEKFLDIKCRMAN LKPDAVIIVATVRALKYNGGVAKADLNNENLEALEKGLPNLLKHVENITQVYGLPAVVAINRFPLDTEAELKLVEDKCKE LGVNVALSEVWAKGGEGGIAVAKEVLRLLDEEENNFRFCYEDDLSIKDKINAIATKIYGADGVDYTPEADKEIANLEKLG FTKVPVCMAKTQYSLTDDQTKLGRPTGFRITVRQATISAGAGFIVALTGEIMKMPGLPKVPAAEKIDVDENGVIAGLF
Sequences:
>Translated_558_residues MGFKSDIEIAQEAKPQDIREVAKKLGLGEDDVELYGKYKAKVDYNLLKRETGKKAKLILTTAINPTPAGEGKTTTTIGVA DAFAKLDKNVLVALREPSLGPVFGVKGGAAGGGYAQVVPMEDINLHFTGDFHAIGAANNLLAAMLDNHIHQGNALRIDPK KITWRRCVDMNDRQLRNIVDGMGKKGDGAVRQDGFDITVASEIMAAFCLASDISDLKERLGNIIVGYSYEGEPVTARQLK ANGAMAALLKDALKPNLVQTLEGTPSFVHGGPFANIAHGCNSVIATRMAMHFADYVITEAGFGADLGAEKFLDIKCRMAN LKPDAVIIVATVRALKYNGGVAKADLNNENLEALEKGLPNLLKHVENITQVYGLPAVVAINRFPLDTEAELKLVEDKCKE LGVNVALSEVWAKGGEGGIAVAKEVLRLLDEEENNFRFCYEDDLSIKDKINAIATKIYGADGVDYTPEADKEIANLEKLG FTKVPVCMAKTQYSLTDDQTKLGRPTGFRITVRQATISAGAGFIVALTGEIMKMPGLPKVPAAEKIDVDENGVIAGLF >Mature_557_residues GFKSDIEIAQEAKPQDIREVAKKLGLGEDDVELYGKYKAKVDYNLLKRETGKKAKLILTTAINPTPAGEGKTTTTIGVAD AFAKLDKNVLVALREPSLGPVFGVKGGAAGGGYAQVVPMEDINLHFTGDFHAIGAANNLLAAMLDNHIHQGNALRIDPKK ITWRRCVDMNDRQLRNIVDGMGKKGDGAVRQDGFDITVASEIMAAFCLASDISDLKERLGNIIVGYSYEGEPVTARQLKA NGAMAALLKDALKPNLVQTLEGTPSFVHGGPFANIAHGCNSVIATRMAMHFADYVITEAGFGADLGAEKFLDIKCRMANL KPDAVIIVATVRALKYNGGVAKADLNNENLEALEKGLPNLLKHVENITQVYGLPAVVAINRFPLDTEAELKLVEDKCKEL GVNVALSEVWAKGGEGGIAVAKEVLRLLDEEENNFRFCYEDDLSIKDKINAIATKIYGADGVDYTPEADKEIANLEKLGF TKVPVCMAKTQYSLTDDQTKLGRPTGFRITVRQATISAGAGFIVALTGEIMKMPGLPKVPAAEKIDVDENGVIAGLF
Specific function: Unknown
COG id: COG2759
COG function: function code F; Formyltetrahydrofolate synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the formate--tetrahydrofolate ligase family
Homologues:
Organism=Homo sapiens, GI222136639, Length=621, Percent_Identity=44.7665056360709, Blast_Score=474, Evalue=1e-134, Organism=Homo sapiens, GI36796743, Length=620, Percent_Identity=44.0322580645161, Blast_Score=448, Evalue=1e-126, Organism=Homo sapiens, GI310124614, Length=86, Percent_Identity=41.8604651162791, Blast_Score=71, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17568737, Length=623, Percent_Identity=43.4991974317817, Blast_Score=470, Evalue=1e-132, Organism=Caenorhabditis elegans, GI17568739, Length=623, Percent_Identity=43.4991974317817, Blast_Score=470, Evalue=1e-132, Organism=Saccharomyces cerevisiae, GI6319558, Length=632, Percent_Identity=42.5632911392405, Blast_Score=461, Evalue=1e-130, Organism=Saccharomyces cerevisiae, GI6321643, Length=627, Percent_Identity=42.7432216905901, Blast_Score=452, Evalue=1e-128, Organism=Drosophila melanogaster, GI62472483, Length=620, Percent_Identity=44.8387096774194, Blast_Score=483, Evalue=1e-136, Organism=Drosophila melanogaster, GI45551871, Length=620, Percent_Identity=44.8387096774194, Blast_Score=483, Evalue=1e-136, Organism=Drosophila melanogaster, GI24645718, Length=620, Percent_Identity=44.8387096774194, Blast_Score=482, Evalue=1e-136, Organism=Drosophila melanogaster, GI17137370, Length=620, Percent_Identity=44.8387096774194, Blast_Score=482, Evalue=1e-136,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FTHS_CLOD6 (Q189R2)
Other databases:
- EMBL: AM180355 - RefSeq: YP_001087195.1 - ProteinModelPortal: Q189R2 - SMR: Q189R2 - STRING: Q189R2 - GeneID: 4916827 - GenomeReviews: AM180355_GR - KEGG: cdf:CD0718 - NMPDR: fig|1496.1.peg.1932 - eggNOG: COG2759 - HOGENOM: HBG677721 - OMA: KMPGLPK - ProtClustDB: PRK13505 - HAMAP: MF_01543 - InterPro: IPR000559 - InterPro: IPR020628
Pfam domain/function: PF01268 FTHFS
EC number: =6.3.4.3
Molecular weight: Translated: 59987; Mature: 59855
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: PS00721 FTHFS_1; PS00722 FTHFS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFKSDIEIAQEAKPQDIREVAKKLGLGEDDVELYGKYKAKVDYNLLKRETGKKAKLILT CCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCHHEEEEEEEEECHHHHHHCCCCCEEEEEE TAINPTPAGEGKTTTTIGVADAFAKLDKNVLVALREPSLGPVFGVKGGAAGGGYAQVVPM EECCCCCCCCCCCEEEEEHHHHHHHCCCCEEEEEECCCCCCEEECCCCCCCCCCEEEEEE EDINLHFTGDFHAIGAANNLLAAMLDNHIHQGNALRIDPKKITWRRCVDMNDRQLRNIVD CCCEEEEECCEEEECCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHCCCCHHHHHHHHH GMGKKGDGAVRQDGFDITVASEIMAAFCLASDISDLKERLGNIIVGYSYEGEPVTARQLK HCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHH ANGAMAALLKDALKPNLVQTLEGTPSFVHGGPFANIAHGCNSVIATRMAMHFADYVITEA CCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC GFGADLGAEKFLDIKCRMANLKPDAVIIVATVRALKYNGGVAKADLNNENLEALEKGLPN CCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEEHHEECCCEEEECCCCCHHHHHHHCHHH LLKHVENITQVYGLPAVVAINRFPLDTEAELKLVEDKCKELGVNVALSEVWAKGGEGGIA HHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEHHHHHCCCCCCHH VAKEVLRLLDEEENNFRFCYEDDLSIKDKINAIATKIYGADGVDYTPEADKEIANLEKLG HHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHCC FTKVPVCMAKTQYSLTDDQTKLGRPTGFRITVRQATISAGAGFIVALTGEIMKMPGLPKV CCCCCCEEECCCCCCCCCHHHCCCCCCEEEEEEEEEECCCCCEEEEEECHHHHCCCCCCC PAAEKIDVDENGVIAGLF CCCCCCCCCCCCEEEECC >Mature Secondary Structure GFKSDIEIAQEAKPQDIREVAKKLGLGEDDVELYGKYKAKVDYNLLKRETGKKAKLILT CCCCCCHHHHCCCCHHHHHHHHHCCCCCCCHHEEEEEEEEECHHHHHHCCCCCEEEEEE TAINPTPAGEGKTTTTIGVADAFAKLDKNVLVALREPSLGPVFGVKGGAAGGGYAQVVPM EECCCCCCCCCCCEEEEEHHHHHHHCCCCEEEEEECCCCCCEEECCCCCCCCCCEEEEEE EDINLHFTGDFHAIGAANNLLAAMLDNHIHQGNALRIDPKKITWRRCVDMNDRQLRNIVD CCCEEEEECCEEEECCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHCCCCHHHHHHHHH GMGKKGDGAVRQDGFDITVASEIMAAFCLASDISDLKERLGNIIVGYSYEGEPVTARQLK HCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHH ANGAMAALLKDALKPNLVQTLEGTPSFVHGGPFANIAHGCNSVIATRMAMHFADYVITEA CCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC GFGADLGAEKFLDIKCRMANLKPDAVIIVATVRALKYNGGVAKADLNNENLEALEKGLPN CCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEEHHEECCCEEEECCCCCHHHHHHHCHHH LLKHVENITQVYGLPAVVAINRFPLDTEAELKLVEDKCKELGVNVALSEVWAKGGEGGIA HHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEHHHHHCCCCCCHH VAKEVLRLLDEEENNFRFCYEDDLSIKDKINAIATKIYGADGVDYTPEADKEIANLEKLG HHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHCC FTKVPVCMAKTQYSLTDDQTKLGRPTGFRITVRQATISAGAGFIVALTGEIMKMPGLPKV CCCCCCEEECCCCCCCCCHHHCCCCCCEEEEEEEEEECCCCCEEEEEECHHHHCCCCCCC PAAEKIDVDENGVIAGLF CCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA