| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is yhaZ [H]
Identifier: 126698211
GI number: 126698211
Start: 756182
End: 757261
Strand: Direct
Name: yhaZ [H]
Synonym: CD0633
Alternate gene names: 126698211
Gene position: 756182-757261 (Clockwise)
Preceding gene: 126698210
Following gene: 126698212
Centisome position: 17.63
GC content: 32.31
Gene sequence:
>1080_bases ATGCCAGAATTACTAAAAAATATGTATAATCGTGAGTCACTTTATGAAGTTGCAGTAGCTATCCAATCAGTTTACAACTC ATTTAAGGTAGACGAGTTCATAAAATCTACAATGGATGAGACATGGAATAACTTAGAATTAAAAGCCAGATGTCGAAAGA TAAGCATGAGTTTAGGAATGTATTTACCAGAAGACTATAAGGAAGCTCTTTCCATTCTTGAAAAATCAGTTACAGGTTTT TATTTTGCTTTTTTCTTTCCAGATTTTGTTGAAGTTTATGGGCAGGACGACATAAATTGGGATTTATCTATAAGTGCATT AGAAAGAAATACTGAGTATTGGTCTTCAGAATTTGCTGTAAGAGCATTTATCATCAAGGATGAAGAGCGTATGATGGCAC AGATGCGTAAATGGTCTAAGCATAAGAGCGAACATGTACGAAGACTTGCAAGTGAAGGTTGTCGTCCCCAGTTGCCTTGG GGACAAGCAATATCCAAATTTAAAAAAGACCCTACACCTGTGCTACCTATATTGGAGCAACTTAAAACAGATACATCAAC GTATGTACAAAAGAGTGTTGCTAATAATCTAAATGATATCTCAAAAACACATCCAGATTTAGTCATAAGCATTGCAAAGG ATTGGTACGGTAAAAATAAATCCACTAACTGGATTGTAAAGCATGGTTGTAGAACTCTGCTAAAAAAAGGAAATCGTGAT GTATTAGCTCTTTTTGGATATGATGATACTACTTCTATAAATCTTCAGGACTTTACTTTAGAAACAACGTCTATTTCTAT TGGAGAGGATTTAACTTTTTCATTTAATATTTTAGCAAAAAAAGCGACAAAAACAAGGCTCGAGTACGGAATTGATTATA TTAAATCTAATGGAAAAAGGAATAGGAAGATATTTAAAATATCGGAGGTTTCATTAAAAGAAAATGAGAAAAAGTCATAT ATGAAAAAACATTCATTTGCAGATGTAAGTGTAAGGAAACATTATCCAGGTATACACTCGATTGCTATTATTATTAATGG TATAGAAAAAGATAAACTTGATTTTGAATTAGGTATATAA
Upstream 100 bases:
>100_bases GAATATTGTATTTTACATAAAGATTTAGCAATATGACACACTGTTGTCGTGTTCTGTAGGATATGATTAATAAATCAGAT ATGAAAGGAGAGTGAGTAAT
Downstream 100 bases:
>100_bases TTTTACTAACAGAATAATCTATATCAGATACTTTGCTAAACTTATATAATATATTTTACTAAATTTATATTAGGTAGTTT ACTACTTGTTTACTGAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MPELLKNMYNRESLYEVAVAIQSVYNSFKVDEFIKSTMDETWNNLELKARCRKISMSLGMYLPEDYKEALSILEKSVTGF YFAFFFPDFVEVYGQDDINWDLSISALERNTEYWSSEFAVRAFIIKDEERMMAQMRKWSKHKSEHVRRLASEGCRPQLPW GQAISKFKKDPTPVLPILEQLKTDTSTYVQKSVANNLNDISKTHPDLVISIAKDWYGKNKSTNWIVKHGCRTLLKKGNRD VLALFGYDDTTSINLQDFTLETTSISIGEDLTFSFNILAKKATKTRLEYGIDYIKSNGKRNRKIFKISEVSLKENEKKSY MKKHSFADVSVRKHYPGIHSIAIIINGIEKDKLDFELGI
Sequences:
>Translated_359_residues MPELLKNMYNRESLYEVAVAIQSVYNSFKVDEFIKSTMDETWNNLELKARCRKISMSLGMYLPEDYKEALSILEKSVTGF YFAFFFPDFVEVYGQDDINWDLSISALERNTEYWSSEFAVRAFIIKDEERMMAQMRKWSKHKSEHVRRLASEGCRPQLPW GQAISKFKKDPTPVLPILEQLKTDTSTYVQKSVANNLNDISKTHPDLVISIAKDWYGKNKSTNWIVKHGCRTLLKKGNRD VLALFGYDDTTSINLQDFTLETTSISIGEDLTFSFNILAKKATKTRLEYGIDYIKSNGKRNRKIFKISEVSLKENEKKSY MKKHSFADVSVRKHYPGIHSIAIIINGIEKDKLDFELGI >Mature_358_residues PELLKNMYNRESLYEVAVAIQSVYNSFKVDEFIKSTMDETWNNLELKARCRKISMSLGMYLPEDYKEALSILEKSVTGFY FAFFFPDFVEVYGQDDINWDLSISALERNTEYWSSEFAVRAFIIKDEERMMAQMRKWSKHKSEHVRRLASEGCRPQLPWG QAISKFKKDPTPVLPILEQLKTDTSTYVQKSVANNLNDISKTHPDLVISIAKDWYGKNKSTNWIVKHGCRTLLKKGNRDV LALFGYDDTTSINLQDFTLETTSISIGEDLTFSFNILAKKATKTRLEYGIDYIKSNGKRNRKIFKISEVSLKENEKKSYM KKHSFADVSVRKHYPGIHSIAIIINGIEKDKLDFELGI
Specific function: Unknown
COG id: COG4335
COG function: function code L; DNA alkylation repair enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HEAT repeat [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011989 - InterPro: IPR016024 - InterPro: IPR000357 - InterPro: IPR021133 [H]
Pfam domain/function: PF02985 HEAT [H]
EC number: NA
Molecular weight: Translated: 41595; Mature: 41464
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPELLKNMYNRESLYEVAVAIQSVYNSFKVDEFIKSTMDETWNNLELKARCRKISMSLGM CCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC YLPEDYKEALSILEKSVTGFYFAFFFPDFVEVYGQDDINWDLSISALERNTEYWSSEFAV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCHHHHCCCCEE RAFIIKDEERMMAQMRKWSKHKSEHVRRLASEGCRPQLPWGQAISKFKKDPTPVLPILEQ EEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHH LKTDTSTYVQKSVANNLNDISKTHPDLVISIAKDWYGKNKSTNWIVKHGCRTLLKKGNRD HHCCHHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHCCCCCCCCHHHHHHHHHHHHCCCCC VLALFGYDDTTSINLQDFTLETTSISIGEDLTFSFNILAKKATKTRLEYGIDYIKSNGKR EEEEEECCCCCEEEEEEEEEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCC NRKIFKISEVSLKENEKKSYMKKHSFADVSVRKHYPGIHSIAIIINGIEKDKLDFELGI CCEEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEEEEEECCCCCCCCEEECC >Mature Secondary Structure PELLKNMYNRESLYEVAVAIQSVYNSFKVDEFIKSTMDETWNNLELKARCRKISMSLGM CHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC YLPEDYKEALSILEKSVTGFYFAFFFPDFVEVYGQDDINWDLSISALERNTEYWSSEFAV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCHHHHCCCCEE RAFIIKDEERMMAQMRKWSKHKSEHVRRLASEGCRPQLPWGQAISKFKKDPTPVLPILEQ EEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHH LKTDTSTYVQKSVANNLNDISKTHPDLVISIAKDWYGKNKSTNWIVKHGCRTLLKKGNRD HHCCHHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHCCCCCCCCHHHHHHHHHHHHCCCCC VLALFGYDDTTSINLQDFTLETTSISIGEDLTFSFNILAKKATKTRLEYGIDYIKSNGKR EEEEEECCCCCEEEEEEEEEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCC NRKIFKISEVSLKENEKKSYMKKHSFADVSVRKHYPGIHSIAIIINGIEKDKLDFELGI CCEEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEEEEEECCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]