Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698202

Identifier: 126698202

GI number: 126698202

Start: 745796

End: 747049

Strand: Direct

Name: 126698202

Synonym: CD0625

Alternate gene names: NA

Gene position: 745796-747049 (Clockwise)

Preceding gene: 126698201

Following gene: 126698203

Centisome position: 17.38

GC content: 27.19

Gene sequence:

>1254_bases
ATGGGGGAAATAGAGATGAATAAGGGATTTTACAAATTAAATTCAATGGTATTGAACTTTGATATTAAGAATGATGTTAA
CAAGATAAGATTTAATCATTATATAATGAGAAAAGAAAACATACAAAGACTTCAAGGAACTCTGCCAAACGGACAATTTT
ATATGACAGTGAGAAGAGCTGCTACAGATTTACAACTTTCTATTTCTACTATAAGTAGGCTTGTAAAAGAGTTTTTGGAT
TTAGGGATAATAAGATTAGTGTCTAAGGGTGTAAAAGGTAATCGTTCTGTATATAGTTACGTAAGTATAGAGTTTAATGG
AAGTTTATTTGATGATAGTAAATATATGGAACTTGACTGTGTATGTAATGATGAATTTATTGATAATAGTGGCATAGAGT
TTGATTGTGATAGCAAAGATAATTCTTTTAATGGAGATATAAATGTAGAAACTGTGCATTGCATTAATGAGTATTTCTCT
GATGATGATGTAGAGCATAATTATAACAATTTCCATAACAAAGATACTATAAAGGATAAAGCCATTTCTAATATTAGCAC
TATCAAAAAATATATTGATGAATCTTTTGATACAAATAAATCAGAAAATTCTAACTTACAACAGGAGTCAATAAATTTCA
ACTTTAATGATACATGCAATGAAATAGATAAAAGAACGAATAATAGTATAGAAAATAATCAAAATAAAAGGCCTATGAGA
TTGAGTGACATCAGTGTTTTAAGTGATAAAGGTATGACAAATAAAAAGAATTACTTTAATCATAATCATGGTATACAAAA
AGGGACTAAATCTGTAACAAAGAAAAAAGAATCCTTAAATAAATTTAATAAAAAAAATATACAGCAAAGCATTATAAATA
TGCTAAATAAAAAATCAGGTAAGAATTTTAAAATCGATTCTCCAATAAGCATAAAACTTATCAATGAAAGGCTAAAGGAA
GGCTATGTCTTAGAAGATTTCTACAAAGTTATTGAGGTAAAAGTGGCTAAGTGGAAAAATACCATAATGGAAATGTATAT
AAGACCAGAAACTTTGTTTAGCTATAAGTTTGAATCCTATGTAAATGAAAACATATCTATGAAAAGTCAAAGTAATGTTC
ACCCATGTAAAGAAGGCAATAGTAATGATAGCAGTAATTATATACATTCTGATTATACAACATATGATGGCAGTGTGCGT
GAGAGAAAAAAATATGAGAATGTAAGATACTGGAATCCTATATGTGAAATTTAA

Upstream 100 bases:

>100_bases
TTAAATTAGGAAATATTAAAAAAATATATATATTTATATTTAAACTATTTTGTTATTTATATAAAAATACTTATCTAGTT
ACTAGCAATTATTAGTAGAA

Downstream 100 bases:

>100_bases
TTAGTTTAAGAATGTATTTATGATAAATAAGATATTAATAGAGAATAGTGAGCTATAGCAAATGATATATCAATAATTGG
TAGTAAGTTATATTAAGTAA

Product: phage-related regulatory protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MGEIEMNKGFYKLNSMVLNFDIKNDVNKIRFNHYIMRKENIQRLQGTLPNGQFYMTVRRAATDLQLSISTISRLVKEFLD
LGIIRLVSKGVKGNRSVYSYVSIEFNGSLFDDSKYMELDCVCNDEFIDNSGIEFDCDSKDNSFNGDINVETVHCINEYFS
DDDVEHNYNNFHNKDTIKDKAISNISTIKKYIDESFDTNKSENSNLQQESINFNFNDTCNEIDKRTNNSIENNQNKRPMR
LSDISVLSDKGMTNKKNYFNHNHGIQKGTKSVTKKKESLNKFNKKNIQQSIINMLNKKSGKNFKIDSPISIKLINERLKE
GYVLEDFYKVIEVKVAKWKNTIMEMYIRPETLFSYKFESYVNENISMKSQSNVHPCKEGNSNDSSNYIHSDYTTYDGSVR
ERKKYENVRYWNPICEI

Sequences:

>Translated_417_residues
MGEIEMNKGFYKLNSMVLNFDIKNDVNKIRFNHYIMRKENIQRLQGTLPNGQFYMTVRRAATDLQLSISTISRLVKEFLD
LGIIRLVSKGVKGNRSVYSYVSIEFNGSLFDDSKYMELDCVCNDEFIDNSGIEFDCDSKDNSFNGDINVETVHCINEYFS
DDDVEHNYNNFHNKDTIKDKAISNISTIKKYIDESFDTNKSENSNLQQESINFNFNDTCNEIDKRTNNSIENNQNKRPMR
LSDISVLSDKGMTNKKNYFNHNHGIQKGTKSVTKKKESLNKFNKKNIQQSIINMLNKKSGKNFKIDSPISIKLINERLKE
GYVLEDFYKVIEVKVAKWKNTIMEMYIRPETLFSYKFESYVNENISMKSQSNVHPCKEGNSNDSSNYIHSDYTTYDGSVR
ERKKYENVRYWNPICEI
>Mature_416_residues
GEIEMNKGFYKLNSMVLNFDIKNDVNKIRFNHYIMRKENIQRLQGTLPNGQFYMTVRRAATDLQLSISTISRLVKEFLDL
GIIRLVSKGVKGNRSVYSYVSIEFNGSLFDDSKYMELDCVCNDEFIDNSGIEFDCDSKDNSFNGDINVETVHCINEYFSD
DDVEHNYNNFHNKDTIKDKAISNISTIKKYIDESFDTNKSENSNLQQESINFNFNDTCNEIDKRTNNSIENNQNKRPMRL
SDISVLSDKGMTNKKNYFNHNHGIQKGTKSVTKKKESLNKFNKKNIQQSIINMLNKKSGKNFKIDSPISIKLINERLKEG
YVLEDFYKVIEVKVAKWKNTIMEMYIRPETLFSYKFESYVNENISMKSQSNVHPCKEGNSNDSSNYIHSDYTTYDGSVRE
RKKYENVRYWNPICEI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48712; Mature: 48581

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEIEMNKGFYKLNSMVLNFDIKNDVNKIRFNHYIMRKENIQRLQGTLPNGQFYMTVRRA
CCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHEEECHHHHHHHHCCCCCCEEEEEEECC
ATDLQLSISTISRLVKEFLDLGIIRLVSKGVKGNRSVYSYVSIEFNGSLFDDSKYMELDC
CCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCEECCCCEEEEEE
VCNDEFIDNSGIEFDCDSKDNSFNGDINVETVHCINEYFSDDDVEHNYNNFHNKDTIKDK
EECCCEECCCCCEEECCCCCCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
AISNISTIKKYIDESFDTNKSENSNLQQESINFNFNDTCNEIDKRTNNSIENNQNKRPMR
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCEE
LSDISVLSDKGMTNKKNYFNHNHGIQKGTKSVTKKKESLNKFNKKNIQQSIINMLNKKSG
ECCHHHHHCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KNFKIDSPISIKLINERLKEGYVLEDFYKVIEVKVAKWKNTIMEMYIRPETLFSYKFESY
CCEECCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
VNENISMKSQSNVHPCKEGNSNDSSNYIHSDYTTYDGSVRERKKYENVRYWNPICEI
HCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCCHHCCC
>Mature Secondary Structure 
GEIEMNKGFYKLNSMVLNFDIKNDVNKIRFNHYIMRKENIQRLQGTLPNGQFYMTVRRA
CCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHEEECHHHHHHHHCCCCCCEEEEEEECC
ATDLQLSISTISRLVKEFLDLGIIRLVSKGVKGNRSVYSYVSIEFNGSLFDDSKYMELDC
CCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCEECCCCEEEEEE
VCNDEFIDNSGIEFDCDSKDNSFNGDINVETVHCINEYFSDDDVEHNYNNFHNKDTIKDK
EECCCEECCCCCEEECCCCCCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
AISNISTIKKYIDESFDTNKSENSNLQQESINFNFNDTCNEIDKRTNNSIENNQNKRPMR
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCEE
LSDISVLSDKGMTNKKNYFNHNHGIQKGTKSVTKKKESLNKFNKKNIQQSIINMLNKKSG
ECCHHHHHCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KNFKIDSPISIKLINERLKEGYVLEDFYKVIEVKVAKWKNTIMEMYIRPETLFSYKFESY
CCEECCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
VNENISMKSQSNVHPCKEGNSNDSSNYIHSDYTTYDGSVRERKKYENVRYWNPICEI
HCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA