Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is yqkA [H]

Identifier: 126698187

GI number: 126698187

Start: 731290

End: 731859

Strand: Direct

Name: yqkA [H]

Synonym: CD0609

Alternate gene names: 126698187

Gene position: 731290-731859 (Clockwise)

Preceding gene: 126698185

Following gene: 126698200

Centisome position: 17.05

GC content: 31.58

Gene sequence:

>570_bases
ATGAAAAAGAAGTTGGAAGATATGACTTTAGAGGAGTTATGGAACTTGTTTCCTATATTTTTGACTACTCACAAAGAATG
TTGGAAAAATTGGTTTAAAGAAGAACAATATAGACTAACTGGAATATTGCCAATGCAAAAAATTGTTAGAATAAGTCATA
TTGGAAGTACTTCTGTGAGTACGATTTATGCCAAGCCCATTGTTGACATACTGATTGAGATAATTCCTGATTATAATATG
AAAGATATTAAAGATTTGATTGAGTCGAATGGATATATTTGTATGTCTGAGAGCAGTAGTAGGCTTTCACTTAATAAAGG
GTATACAGTAGATGGGTTTGAAGAACGAGTTTTTCATTTGCATATAAGGTATGTAGGTGATAATGATGAGTTGTTTTTTA
GAGATTACTTAATTGACCACTCAGATGTTGCAAAGGAGTATGAAAAACTTAAGTTGGACCTTTGGAAGAAGTATGAGCAT
AATCGTGATGCTTATACAGATAGTAAACTAGATTTTGTTAGGGAGTTTACTGAAAAGGCAAAGGTGTTGTATTCTAATAG
ATATAATTAG

Upstream 100 bases:

>100_bases
ATAATTAGAAAAATGATTTGATAAAAAATAAAGTTAAATATTAACTAAGTAAATTTGAAAAAGAAAAAATATAAAGTACA
AATTTAAAGGGAGGTAACTA

Downstream 100 bases:

>100_bases
AAATAGGTACAATTAGATATTTATCTTATATATCGTATTATATTTTTTAAGAAAGTAATTAATAGAAAAAGGGGTTGTTT
CAAAATGGAGAGATAAATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MKKKLEDMTLEELWNLFPIFLTTHKECWKNWFKEEQYRLTGILPMQKIVRISHIGSTSVSTIYAKPIVDILIEIIPDYNM
KDIKDLIESNGYICMSESSSRLSLNKGYTVDGFEERVFHLHIRYVGDNDELFFRDYLIDHSDVAKEYEKLKLDLWKKYEH
NRDAYTDSKLDFVREFTEKAKVLYSNRYN

Sequences:

>Translated_189_residues
MKKKLEDMTLEELWNLFPIFLTTHKECWKNWFKEEQYRLTGILPMQKIVRISHIGSTSVSTIYAKPIVDILIEIIPDYNM
KDIKDLIESNGYICMSESSSRLSLNKGYTVDGFEERVFHLHIRYVGDNDELFFRDYLIDHSDVAKEYEKLKLDLWKKYEH
NRDAYTDSKLDFVREFTEKAKVLYSNRYN
>Mature_189_residues
MKKKLEDMTLEELWNLFPIFLTTHKECWKNWFKEEQYRLTGILPMQKIVRISHIGSTSVSTIYAKPIVDILIEIIPDYNM
KDIKDLIESNGYICMSESSSRLSLNKGYTVDGFEERVFHLHIRYVGDNDELFFRDYLIDHSDVAKEYEKLKLDLWKKYEH
NRDAYTDSKLDFVREFTEKAKVLYSNRYN

Specific function: Unknown

COG id: COG2320

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181
- InterPro:   IPR007344 [H]

Pfam domain/function: PF00583 Acetyltransf_1; PF04229 UPF0157 [H]

EC number: NA

Molecular weight: Translated: 22686; Mature: 22686

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKLEDMTLEELWNLFPIFLTTHKECWKNWFKEEQYRLTGILPMQKIVRISHIGSTSVS
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHH
TIYAKPIVDILIEIIPDYNMKDIKDLIESNGYICMSESSSRLSLNKGYTVDGFEERVFHL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEECCCCCEEECCCCCCCCCHHHEEEEE
HIRYVGDNDELFFRDYLIDHSDVAKEYEKLKLDLWKKYEHNRDAYTDSKLDFVREFTEKA
EEEEECCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
KVLYSNRYN
HHHHCCCCC
>Mature Secondary Structure
MKKKLEDMTLEELWNLFPIFLTTHKECWKNWFKEEQYRLTGILPMQKIVRISHIGSTSVS
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHH
TIYAKPIVDILIEIIPDYNMKDIKDLIESNGYICMSESSSRLSLNKGYTVDGFEERVFHL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEECCCCCEEECCCCCCCCCHHHEEEEE
HIRYVGDNDELFFRDYLIDHSDVAKEYEKLKLDLWKKYEHNRDAYTDSKLDFVREFTEKA
EEEEECCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
KVLYSNRYN
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]