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The map label for this gene is ybdN [H]

Identifier: 126698172

GI number: 126698172

Start: 718446

End: 719759

Strand: Direct

Name: ybdN [H]

Synonym: CD0594

Alternate gene names: 126698172

Gene position: 718446-719759 (Clockwise)

Preceding gene: 126698168

Following gene: 126698173

Centisome position: 16.75

GC content: 29.76

Gene sequence:

>1314_bases
ATGGATAAGAGATATTTAGAATCCGATGTATTTGAAGCTTTTCAAGAAAGACTTTCTTATCTTTTTAATGAATTTGATTA
TATCTATGTATCTTTTAGCGGAGGAAAAGATAGTGGTTTACTGCTAAATTTAGTTTTGGATTATAAGAGAAAGAATAATA
TAAGTTCCAAAATAGGAGTATTTCATCAAGATTTTGAGGCTCAATATAGTTTGACTACTGAATATGTTGAAAAAGTATTT
GAAGATAATATTGAAGATATTGAACCATATTGGGTGTGTTTACCAATGGCTACAAGAACTGCTGTAGGAAATTATGAAAT
GTATTGGTATCCATGGGATGATGAGAAAGAAGAGTTATGGGTAAGGGAAATGCCAGTCAAAGAATACATAATAAATCAAA
AAAATAATCCTTTTACTTATTATAAATATAAAATGAGACAAGAAAGTTTGGCAAAACAATTTGGTAGATGGATTAGAGAT
ATACATGAAGGTGCAAAAGTTGTTTGCTTATTAGGAACACGAGCAGCAGAATCTCTACAACGTTATTGTTCTATTGTGAA
TAAACAGCATGGATATAAAGGAAAGTGCTGGATAACTAAGGAATTTAAAAATGTCTGGACGGCATCTCCTATATATGATT
GGGAAATAGAAGATATATGGTTAGCACACTATAAATTTGACTATGACTATAATAAAATTTATGACTTATTCTATAAAGCT
GGAGTAGCTCCAAGAAAAATGAGAGTGGCATCACCTTTTAATGATTCAGCAAAAGAGAGTTTAAATTTATACAGAATATT
GGACCCAGATGTATGGGTGAAATTGGTTGCTAGAGTACAAGGAGTTAATTTTACTTCTATTTATGGCAAAACAAAAGCTA
TGGGATATCGTAGTGTTAAATTGCCATATGGACACACATGGAAAAGTTTCACATATTTTTTGCTTGATACCTTACCTGAA
AATATAAGGAATAGCTATATTAAAAAATTTTCAACATCTATTGAGTTTTGGCAGAATACAGGTGGTGGTTTGTCAGAAAT
AGTTATACGTGAATTGTTGAGAAAAGGTTATAAAATAGAATTAAATGGAGTTTCAAATCATACAAAAGATAAAAAGAGTA
GAGTCATATTTTTGGATGATATACCTGATGATACGGATGATATTAAATTTACCAAAGATATACCAAGTTGGAAAAGAATG
TGTTATTGTATTTTAAAAAATGACCATATGTGTAGATTTATGGGATTTGGTCCTACAAAAGAACAGAGAATTAGAACGGA
ATATATTAAGAAGAAATATGAAAAAATTCATTAG

Upstream 100 bases:

>100_bases
ATTTAAATAATGTATAATTTATGCTGATTACTGCTAAAAAAGCATAATAATATTGCATTGTAAGGTTTTATAAACTTCTA
ATTGAAAGGGGATAATTCAA

Downstream 100 bases:

>100_bases
ATAGGAGTTAAGATGCTATGGAATATAAAAGTCCTGTATATGGAATCATCGCAGTGCCAATCGAAAAGATAGAATCTAAC
GACTATAATCCAAATGCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MDKRYLESDVFEAFQERLSYLFNEFDYIYVSFSGGKDSGLLLNLVLDYKRKNNISSKIGVFHQDFEAQYSLTTEYVEKVF
EDNIEDIEPYWVCLPMATRTAVGNYEMYWYPWDDEKEELWVREMPVKEYIINQKNNPFTYYKYKMRQESLAKQFGRWIRD
IHEGAKVVCLLGTRAAESLQRYCSIVNKQHGYKGKCWITKEFKNVWTASPIYDWEIEDIWLAHYKFDYDYNKIYDLFYKA
GVAPRKMRVASPFNDSAKESLNLYRILDPDVWVKLVARVQGVNFTSIYGKTKAMGYRSVKLPYGHTWKSFTYFLLDTLPE
NIRNSYIKKFSTSIEFWQNTGGGLSEIVIRELLRKGYKIELNGVSNHTKDKKSRVIFLDDIPDDTDDIKFTKDIPSWKRM
CYCILKNDHMCRFMGFGPTKEQRIRTEYIKKKYEKIH

Sequences:

>Translated_437_residues
MDKRYLESDVFEAFQERLSYLFNEFDYIYVSFSGGKDSGLLLNLVLDYKRKNNISSKIGVFHQDFEAQYSLTTEYVEKVF
EDNIEDIEPYWVCLPMATRTAVGNYEMYWYPWDDEKEELWVREMPVKEYIINQKNNPFTYYKYKMRQESLAKQFGRWIRD
IHEGAKVVCLLGTRAAESLQRYCSIVNKQHGYKGKCWITKEFKNVWTASPIYDWEIEDIWLAHYKFDYDYNKIYDLFYKA
GVAPRKMRVASPFNDSAKESLNLYRILDPDVWVKLVARVQGVNFTSIYGKTKAMGYRSVKLPYGHTWKSFTYFLLDTLPE
NIRNSYIKKFSTSIEFWQNTGGGLSEIVIRELLRKGYKIELNGVSNHTKDKKSRVIFLDDIPDDTDDIKFTKDIPSWKRM
CYCILKNDHMCRFMGFGPTKEQRIRTEYIKKKYEKIH
>Mature_437_residues
MDKRYLESDVFEAFQERLSYLFNEFDYIYVSFSGGKDSGLLLNLVLDYKRKNNISSKIGVFHQDFEAQYSLTTEYVEKVF
EDNIEDIEPYWVCLPMATRTAVGNYEMYWYPWDDEKEELWVREMPVKEYIINQKNNPFTYYKYKMRQESLAKQFGRWIRD
IHEGAKVVCLLGTRAAESLQRYCSIVNKQHGYKGKCWITKEFKNVWTASPIYDWEIEDIWLAHYKFDYDYNKIYDLFYKA
GVAPRKMRVASPFNDSAKESLNLYRILDPDVWVKLVARVQGVNFTSIYGKTKAMGYRSVKLPYGHTWKSFTYFLLDTLPE
NIRNSYIKKFSTSIEFWQNTGGGLSEIVIRELLRKGYKIELNGVSNHTKDKKSRVIFLDDIPDDTDDIKFTKDIPSWKRM
CYCILKNDHMCRFMGFGPTKEQRIRTEYIKKKYEKIH

Specific function: Unknown

COG id: COG3969

COG function: function code R; Predicted phosphoadenosine phosphosulfate sulfotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786818, Length=440, Percent_Identity=31.1363636363636, Blast_Score=214, Evalue=1e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021845
- InterPro:   IPR002500
- InterPro:   IPR014729 [H]

Pfam domain/function: PF11922 DUF3440; PF01507 PAPS_reduct [H]

EC number: NA

Molecular weight: Translated: 52163; Mature: 52163

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKRYLESDVFEAFQERLSYLFNEFDYIYVSFSGGKDSGLLLNLVLDYKRKNNISSKIGV
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEHHHHCCCCCHHHCC
FHQDFEAQYSLTTEYVEKVFEDNIEDIEPYWVCLPMATRTAVGNYEMYWYPWDDEKEELW
HHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHCCCCEEEEEECCCCCHHHHH
VREMPVKEYIINQKNNPFTYYKYKMRQESLAKQFGRWIRDIHEGAKVVCLLGTRAAESLQ
HHCCCHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
RYCSIVNKQHGYKGKCWITKEFKNVWTASPIYDWEIEDIWLAHYKFDYDYNKIYDLFYKA
HHHHHHHHCCCCCCEEEEEHHHHHCCCCCCEECCCCCEEEEEEEEECCCHHHHHHHHHHC
GVAPRKMRVASPFNDSAKESLNLYRILDPDVWVKLVARVQGVNFTSIYGKTKAMGYRSVK
CCCCCCEEECCCCCCCHHHCCCEEEEECHHHHHHHHHHHCCCCEEEECCCHHHCCCEEEE
LPYGHTWKSFTYFLLDTLPENIRNSYIKKFSTSIEFWQNTGGGLSEIVIRELLRKGYKIE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEE
LNGVSNHTKDKKSRVIFLDDIPDDTDDIKFTKDIPSWKRMCYCILKNDHMCRFMGFGPTK
ECCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCHHHHHEEEEECCCCEEEEECCCCCH
EQRIRTEYIKKKYEKIH
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDKRYLESDVFEAFQERLSYLFNEFDYIYVSFSGGKDSGLLLNLVLDYKRKNNISSKIGV
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEHHHHCCCCCHHHCC
FHQDFEAQYSLTTEYVEKVFEDNIEDIEPYWVCLPMATRTAVGNYEMYWYPWDDEKEELW
HHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHCCCCEEEEEECCCCCHHHHH
VREMPVKEYIINQKNNPFTYYKYKMRQESLAKQFGRWIRDIHEGAKVVCLLGTRAAESLQ
HHCCCHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
RYCSIVNKQHGYKGKCWITKEFKNVWTASPIYDWEIEDIWLAHYKFDYDYNKIYDLFYKA
HHHHHHHHCCCCCCEEEEEHHHHHCCCCCCEECCCCCEEEEEEEEECCCHHHHHHHHHHC
GVAPRKMRVASPFNDSAKESLNLYRILDPDVWVKLVARVQGVNFTSIYGKTKAMGYRSVK
CCCCCCEEECCCCCCCHHHCCCEEEEECHHHHHHHHHHHCCCCEEEECCCHHHCCCEEEE
LPYGHTWKSFTYFLLDTLPENIRNSYIKKFSTSIEFWQNTGGGLSEIVIRELLRKGYKIE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEE
LNGVSNHTKDKKSRVIFLDDIPDDTDDIKFTKDIPSWKRMCYCILKNDHMCRFMGFGPTK
ECCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCHHHHHEEEEECCCCEEEEECCCCCH
EQRIRTEYIKKKYEKIH
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]