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The map label for this gene is kdpE [H]

Identifier: 126698102

GI number: 126698102

Start: 622259

End: 622963

Strand: Direct

Name: kdpE [H]

Synonym: CD0521

Alternate gene names: 126698102

Gene position: 622259-622963 (Clockwise)

Preceding gene: 126698101

Following gene: 126698103

Centisome position: 14.5

GC content: 33.62

Gene sequence:

>705_bases
GTGGAAATAAAGCCATTAGTTCTAATTGTAGAAGATGATAAGCCAATTTGTAAATTTATAAAAGTATCTCTTGAAACTCA
AAATTATAGGTGTGTAGAGACAGATAATGGAGGAACAGCTATATCACTTATACATTCTCTTGACCCAGATTTGATAATTT
TGGATTTAGGACTACCAGATATTGATGGGATTGAGGTAATAGGACGAGTTAGGGCATGTGCAAAGACTAATAAAATAATT
GTTGTTTCAGCGAGAGAGCATGAGAGGGATAAGGTGGAAGCTTTAGATGGAGGAGCAGACGATTATTTAACTAAACCTTT
TAGTGTAACAGAGCTTTTGGCTAGAGTACGTGTGGCTCTTAGAAATAAAGCTCAACAGGATAATATAAATAATGATGCTC
CAAAGTCTTTTGAAGTTAAAAACCTAAAGATAGATTATGAAAATCATATTGTGTCAATTAATGGTGAAGAAATACATTTA
ACTCCAATCGAATATAAGATTATTGAGTTGATGTCTAAGTATTCAGGAAGAGTCTTAACCCATAAGTTTATAATAGATAA
AGTTTGGGGAAATTACTATGAAAGTGAAAATCAGTCGCTTAGAGTTTTTATGGCAAGTATAAGAAGGAAAATTGAAAAGA
ATCCTGCTCAGCCAGAATATATTTTGACTGAGGTTGGGGTAGGTTACCGTATGGCGGATGAATAG

Upstream 100 bases:

>100_bases
TAGAAGCTCATGGTGGAGAAATTGTCGCCTTTAATAATCCTTCTGGAGGAGCTACATTTAGATTTAGCATACCTATGTAT
GATGAGGAGGGGAAAGACAA

Downstream 100 bases:

>100_bases
ATACTAAATGATTAGTTGCTGAGTGGTTACTAAATGAATATGAGTAATAATCAGATAGAAATTATTTGTTATGTAAGAAA
ATCTAAGTATTTTAAATCGA

Product: two-component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MEIKPLVLIVEDDKPICKFIKVSLETQNYRCVETDNGGTAISLIHSLDPDLIILDLGLPDIDGIEVIGRVRACAKTNKII
VVSAREHERDKVEALDGGADDYLTKPFSVTELLARVRVALRNKAQQDNINNDAPKSFEVKNLKIDYENHIVSINGEEIHL
TPIEYKIIELMSKYSGRVLTHKFIIDKVWGNYYESENQSLRVFMASIRRKIEKNPAQPEYILTEVGVGYRMADE

Sequences:

>Translated_234_residues
MEIKPLVLIVEDDKPICKFIKVSLETQNYRCVETDNGGTAISLIHSLDPDLIILDLGLPDIDGIEVIGRVRACAKTNKII
VVSAREHERDKVEALDGGADDYLTKPFSVTELLARVRVALRNKAQQDNINNDAPKSFEVKNLKIDYENHIVSINGEEIHL
TPIEYKIIELMSKYSGRVLTHKFIIDKVWGNYYESENQSLRVFMASIRRKIEKNPAQPEYILTEVGVGYRMADE
>Mature_234_residues
MEIKPLVLIVEDDKPICKFIKVSLETQNYRCVETDNGGTAISLIHSLDPDLIILDLGLPDIDGIEVIGRVRACAKTNKII
VVSAREHERDKVEALDGGADDYLTKPFSVTELLARVRVALRNKAQQDNINNDAPKSFEVKNLKIDYENHIVSINGEEIHL
TPIEYKIIELMSKYSGRVLTHKFIIDKVWGNYYESENQSLRVFMASIRRKIEKNPAQPEYILTEVGVGYRMADE

Specific function: Member of the two-component regulatory system kdpD/kdpE involved in the regulation of the kdp operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786911, Length=226, Percent_Identity=40.7079646017699, Blast_Score=183, Evalue=9e-48,
Organism=Escherichia coli, GI1786784, Length=225, Percent_Identity=34.2222222222222, Blast_Score=127, Evalue=5e-31,
Organism=Escherichia coli, GI1787375, Length=223, Percent_Identity=32.7354260089686, Blast_Score=123, Evalue=8e-30,
Organism=Escherichia coli, GI87082012, Length=223, Percent_Identity=32.2869955156951, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1786599, Length=228, Percent_Identity=30.7017543859649, Blast_Score=121, Evalue=5e-29,
Organism=Escherichia coli, GI1790552, Length=225, Percent_Identity=31.5555555555556, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI1789402, Length=228, Percent_Identity=29.3859649122807, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1788394, Length=229, Percent_Identity=29.6943231441048, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1789809, Length=227, Percent_Identity=29.9559471365639, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=28.5087719298246, Blast_Score=98, Evalue=4e-22,
Organism=Escherichia coli, GI1790860, Length=225, Percent_Identity=26.6666666666667, Blast_Score=96, Evalue=1e-21,
Organism=Escherichia coli, GI1790863, Length=231, Percent_Identity=26.4069264069264, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1787229, Length=231, Percent_Identity=28.1385281385281, Blast_Score=81, Evalue=5e-17,
Organism=Escherichia coli, GI145693140, Length=234, Percent_Identity=24.3589743589744, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1788550, Length=125, Percent_Identity=29.6, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1790299, Length=128, Percent_Identity=26.5625, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26585; Mature: 26585

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIKPLVLIVEDDKPICKFIKVSLETQNYRCVETDNGGTAISLIHSLDPDLIILDLGLPD
CCCCEEEEEECCCCHHEEEEEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEECCCCC
IDGIEVIGRVRACAKTNKIIVVSAREHERDKVEALDGGADDYLTKPFSVTELLARVRVAL
CCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHH
RNKAQQDNINNDAPKSFEVKNLKIDYENHIVSINGEEIHLTPIEYKIIELMSKYSGRVLT
HCCHHHCCCCCCCCCCEEEEEEEEEECCEEEEECCCEEEEECHHHHHHHHHHHHCCCEEE
HKFIIDKVWGNYYESENQSLRVFMASIRRKIEKNPAQPEYILTEVGVGYRMADE
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEECCC
>Mature Secondary Structure
MEIKPLVLIVEDDKPICKFIKVSLETQNYRCVETDNGGTAISLIHSLDPDLIILDLGLPD
CCCCEEEEEECCCCHHEEEEEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEECCCCC
IDGIEVIGRVRACAKTNKIIVVSAREHERDKVEALDGGADDYLTKPFSVTELLARVRVAL
CCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHH
RNKAQQDNINNDAPKSFEVKNLKIDYENHIVSINGEEIHLTPIEYKIIELMSKYSGRVLT
HCCHHHCCCCCCCCCCEEEEEEEEEECCEEEEECCCEEEEECHHHHHHHHHHHHCCCEEE
HKFIIDKVWGNYYESENQSLRVFMASIRRKIEKNPAQPEYILTEVGVGYRMADE
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1532388; 8905232; 9278503 [H]