Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698054

Identifier: 126698054

GI number: 126698054

Start: 566410

End: 566922

Strand: Direct

Name: 126698054

Synonym: CD0477

Alternate gene names: NA

Gene position: 566410-566922 (Clockwise)

Preceding gene: 126698050

Following gene: 126698055

Centisome position: 13.2

GC content: 24.37

Gene sequence:

>513_bases
TTGAAAAAAATATCTCAAGAAAAAATAAGTACACATATCCAAGAAGTACCACAGGAAAAAATTGAACAGTGGAAATCTTT
ATATGAAAAATATAAAAGTATTTTAAAAGTAAATTCTAAGTCTGTTTTAGAAATAATAGAGTTTTTAAAGCGAAAATATG
TAATAGTAGAGGAAACTTCAGAGGAATTTAAACATGTAGTTATCAATAATATTAAGTTAAACAAGCCTTTTTCACAAAAG
ATTTCCAGTGATAAAGAATTAAAACCTATTGTATTTACAATTCCAAATGAAGGAAATGCAAAAAAATTGTACGATACTCA
AGAGGAAACTTATAGTGGCTGTAAGATTATTGTAGGTATGGAATTTGAAACAGGTTATGTTTTTGTAGAAGGTAGTGATG
AGCTTAATGATGAAATAACTTCTTTTAAAGGATTAGATAAATATGATATAAATAATTATTATTTAGTAGCAAACTATATT
AGATGTCTAAAGAAATATAAATTAATAGATTAG

Upstream 100 bases:

>100_bases
AAGACATATTTAAGTATGCAAAATTCTATTAAGTAGGAACCTTGTAACTTTAGTCATGTGAGATTTATAAGGATATTTAA
GTATTGAAAGGAGAGTTTAA

Downstream 100 bases:

>100_bases
TGTTTGATTAATAAATTAGTGTTTGATTTAAGGATTATAGAGTAAATTTGAAGTTAGTGTGATAATGAAACTAAGCTTAA
ATCTAATATAACTGTAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MKKISQEKISTHIQEVPQEKIEQWKSLYEKYKSILKVNSKSVLEIIEFLKRKYVIVEETSEEFKHVVINNIKLNKPFSQK
ISSDKELKPIVFTIPNEGNAKKLYDTQEETYSGCKIIVGMEFETGYVFVEGSDELNDEITSFKGLDKYDINNYYLVANYI
RCLKKYKLID

Sequences:

>Translated_170_residues
MKKISQEKISTHIQEVPQEKIEQWKSLYEKYKSILKVNSKSVLEIIEFLKRKYVIVEETSEEFKHVVINNIKLNKPFSQK
ISSDKELKPIVFTIPNEGNAKKLYDTQEETYSGCKIIVGMEFETGYVFVEGSDELNDEITSFKGLDKYDINNYYLVANYI
RCLKKYKLID
>Mature_170_residues
MKKISQEKISTHIQEVPQEKIEQWKSLYEKYKSILKVNSKSVLEIIEFLKRKYVIVEETSEEFKHVVINNIKLNKPFSQK
ISSDKELKPIVFTIPNEGNAKKLYDTQEETYSGCKIIVGMEFETGYVFVEGSDELNDEITSFKGLDKYDINNYYLVANYI
RCLKKYKLID

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19997; Mature: 19997

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKISQEKISTHIQEVPQEKIEQWKSLYEKYKSILKVNSKSVLEIIEFLKRKYVIVEETS
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCEEEEECCH
EEFKHVVINNIKLNKPFSQKISSDKELKPIVFTIPNEGNAKKLYDTQEETYSGCKIIVGM
HHHHHHHHCCEECCCCHHHHCCCCCCCCCEEEECCCCCCCCCCCCCHHHHCCCCEEEEEE
EFETGYVFVEGSDELNDEITSFKGLDKYDINNYYLVANYIRCLKKYKLID
EECCCEEEEECCCHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKISQEKISTHIQEVPQEKIEQWKSLYEKYKSILKVNSKSVLEIIEFLKRKYVIVEETS
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCEEEEECCH
EEFKHVVINNIKLNKPFSQKISSDKELKPIVFTIPNEGNAKKLYDTQEETYSGCKIIVGM
HHHHHHHHCCEECCCCHHHHCCCCCCCCCEEEECCCCCCCCCCCCCHHHHCCCCEEEEEE
EFETGYVFVEGSDELNDEITSFKGLDKYDINNYYLVANYIRCLKKYKLID
EECCCEEEEECCCHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA