| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is ppaX [H]
Identifier: 126698027
GI number: 126698027
Start: 537537
End: 538166
Strand: Direct
Name: ppaX [H]
Synonym: CD0453
Alternate gene names: 126698027
Gene position: 537537-538166 (Clockwise)
Preceding gene: 126698026
Following gene: 126698028
Centisome position: 12.53
GC content: 33.17
Gene sequence:
>630_bases ATGGATTACAAAGAAATCGTCTTTGATGTAGACAACACATTGATTGATACTGAATACGCCATTTTACACTCTCTACAAGA CACGATAAAACAAATCAATAGAAAGATAATTCCTATCAAAGAATTGTCTTTTGCTTTAGGAATAACAGGCGAGGACGCTT TACGTTATTTGAAAATCGAAGATATAACAATTGCTCTATCAATGTGGGATAGGAATATGGAAAAGTATAAGAATACAGTT CTTGTGTTCAAAGAAATAAAGGAAATGCTTACTGAAATCATAAAATTAAATATTGGCATTGGAATTGTTACATCCAAAAC TCATGAAGAATTTAGAAACGATTTTCTGAGCTTTGACATAGCACCATACTTTAATACTGTAGTATGCTCCAATGACACTT TAGAGCATAAGCCAAAAGCAGTACCATTATTGAAATACATGGAACTGACAAAATGTCAAAACAACGAACTGCTTTATATT GGGGATAGTATATATGATATGCAATGTGCCTATCGTGCAAATGTTGATTTTGGACTGGTAAAATGGGGTTCTGGCGATAG AGTAAGCACTGTAATATCTTTTACCACACCATTGGATTTGATAAGGCAACTATCTGTATCAAGCAACTAA
Upstream 100 bases:
>100_bases ACAGAAAAAAATACAGAAGAACAGATTAAAATGTGCTTTGAAGCATGTCGTACAGACACTTGGACAGTGATTTTCGATTA GGTTAATTAAGGAGAAATTA
Downstream 100 bases:
>100_bases CAATCATAGAAAATAGCAAAGTCAGCTGAGCCAGTCAATGGTCAAGATGAACGGCGCATTTCATGTGCCACCGTTGACAG CCCCGTCTGATTTTGCTGAC
Product: phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MDYKEIVFDVDNTLIDTEYAILHSLQDTIKQINRKIIPIKELSFALGITGEDALRYLKIEDITIALSMWDRNMEKYKNTV LVFKEIKEMLTEIIKLNIGIGIVTSKTHEEFRNDFLSFDIAPYFNTVVCSNDTLEHKPKAVPLLKYMELTKCQNNELLYI GDSIYDMQCAYRANVDFGLVKWGSGDRVSTVISFTTPLDLIRQLSVSSN
Sequences:
>Translated_209_residues MDYKEIVFDVDNTLIDTEYAILHSLQDTIKQINRKIIPIKELSFALGITGEDALRYLKIEDITIALSMWDRNMEKYKNTV LVFKEIKEMLTEIIKLNIGIGIVTSKTHEEFRNDFLSFDIAPYFNTVVCSNDTLEHKPKAVPLLKYMELTKCQNNELLYI GDSIYDMQCAYRANVDFGLVKWGSGDRVSTVISFTTPLDLIRQLSVSSN >Mature_209_residues MDYKEIVFDVDNTLIDTEYAILHSLQDTIKQINRKIIPIKELSFALGITGEDALRYLKIEDITIALSMWDRNMEKYKNTV LVFKEIKEMLTEIIKLNIGIGIVTSKTHEEFRNDFLSFDIAPYFNTVVCSNDTLEHKPKAVPLLKYMELTKCQNNELLYI GDSIYDMQCAYRANVDFGLVKWGSGDRVSTVISFTTPLDLIRQLSVSSN
Specific function: Unknown
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. PpaX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =3.6.1.1 [H]
Molecular weight: Translated: 24035; Mature: 24035
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYKEIVFDVDNTLIDTEYAILHSLQDTIKQINRKIIPIKELSFALGITGEDALRYLKIE CCHHHEEEECCCEEECHHHHHHHHHHHHHHHHCCCCCCHHHHHEEECCCCHHHEEEEEEE DITIALSMWDRNMEKYKNTVLVFKEIKEMLTEIIKLNIGIGIVTSKTHEEFRNDFLSFDI EEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHEEEC APYFNTVVCSNDTLEHKPKAVPLLKYMELTKCQNNELLYIGDSIYDMQCAYRANVDFGLV CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCEEEEEEEEECCCCEEEE KWGSGDRVSTVISFTTPLDLIRQLSVSSN EECCCCCEEEEEEECCHHHHHHHHHCCCC >Mature Secondary Structure MDYKEIVFDVDNTLIDTEYAILHSLQDTIKQINRKIIPIKELSFALGITGEDALRYLKIE CCHHHEEEECCCEEECHHHHHHHHHHHHHHHHCCCCCCHHHHHEEECCCCHHHEEEEEEE DITIALSMWDRNMEKYKNTVLVFKEIKEMLTEIIKLNIGIGIVTSKTHEEFRNDFLSFDI EEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHEEEC APYFNTVVCSNDTLEHKPKAVPLLKYMELTKCQNNELLYIGDSIYDMQCAYRANVDFGLV CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCEEEEEEEEECCCCEEEE KWGSGDRVSTVISFTTPLDLIRQLSVSSN EECCCCCEEEEEEECCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]