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The map label for this gene is yjhB [H]

Identifier: 126698026

GI number: 126698026

Start: 536903

End: 537517

Strand: Direct

Name: yjhB [H]

Synonym: CD0452

Alternate gene names: 126698026

Gene position: 536903-537517 (Clockwise)

Preceding gene: 126698025

Following gene: 126698027

Centisome position: 12.51

GC content: 36.42

Gene sequence:

>615_bases
ATGAACGAAAAATGGTTGGAATGGGCGATAGAATTGCAAAGCATTGCTCAAGCCGGAATAACTTATGGGAAAGATATATA
CGACATAGAGCGATATGAGAGAATACGAGAAATTTCTGCCGAAATGATAGCATATAAAACTGACATATCAACAGAAAAAG
TAAGAAATCTTTTTTGCAATGAAAGCGGATACCAAACTCCAAAACTTGATACCAGAGCCGTTATTTTTGAAAATGGAAAA
ATACTTCTTGTTAAAGAAAATACAGGGAAGTGGTCGCTTCCGGGTGGTTGGGTTGAAGTAAATTTATCAGTCAAGGAAAA
TACTATTAAAGAGGTCAAAGAAGAGGCTGGATTAGATATAACCGCCGACAGGATTATTGCAATTCAAGACCGTGCGAAAC
ACAATTTACCTATATATGCTTACGGAGTATGCAAAATATTTGTTCTTTGCACCGTTATCGGGGGTACATTCAAAGAAAAT
ATAGAAACTACGGAGTTTTCTTATTTCTCCGAAAATGAACTTCCTGAACTCGCCACAGAAAAAAATACAGAAGAACAGAT
TAAAATGTGCTTTGAAGCATGTCGTACAGACACTTGGACAGTGATTTTCGATTAG

Upstream 100 bases:

>100_bases
ATAGAATATGTTCAACATACAAAGCAGGATTAGTTAAAAATATATTTTACTACTAAGTAACTAATTATAATATATTCTTC
GGAAAACTGGAGGTAATTTT

Downstream 100 bases:

>100_bases
GTTAATTAAGGAGAAATTAATGGATTACAAAGAAATCGTCTTTGATGTAGACAACACATTGATTGATACTGAATACGCCA
TTTTACACTCTCTACAAGAC

Product: DNA repair protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MNEKWLEWAIELQSIAQAGITYGKDIYDIERYERIREISAEMIAYKTDISTEKVRNLFCNESGYQTPKLDTRAVIFENGK
ILLVKENTGKWSLPGGWVEVNLSVKENTIKEVKEEAGLDITADRIIAIQDRAKHNLPIYAYGVCKIFVLCTVIGGTFKEN
IETTEFSYFSENELPELATEKNTEEQIKMCFEACRTDTWTVIFD

Sequences:

>Translated_204_residues
MNEKWLEWAIELQSIAQAGITYGKDIYDIERYERIREISAEMIAYKTDISTEKVRNLFCNESGYQTPKLDTRAVIFENGK
ILLVKENTGKWSLPGGWVEVNLSVKENTIKEVKEEAGLDITADRIIAIQDRAKHNLPIYAYGVCKIFVLCTVIGGTFKEN
IETTEFSYFSENELPELATEKNTEEQIKMCFEACRTDTWTVIFD
>Mature_204_residues
MNEKWLEWAIELQSIAQAGITYGKDIYDIERYERIREISAEMIAYKTDISTEKVRNLFCNESGYQTPKLDTRAVIFENGK
ILLVKENTGKWSLPGGWVEVNLSVKENTIKEVKEEAGLDITADRIIAIQDRAKHNLPIYAYGVCKIFVLCTVIGGTFKEN
IETTEFSYFSENELPELATEKNTEEQIKMCFEACRTDTWTVIFD

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 23474; Mature: 23474

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEKWLEWAIELQSIAQAGITYGKDIYDIERYERIREISAEMIAYKTDISTEKVRNLFCN
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC
ESGYQTPKLDTRAVIFENGKILLVKENTGKWSLPGGWVEVNLSVKENTIKEVKEEAGLDI
CCCCCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCEEEEEEEECHHHHHHHHHHHCCCE
TADRIIAIQDRAKHNLPIYAYGVCKIFVLCTVIGGTFKENIETTEFSYFSENELPELATE
ECCEEEEEECCCCCCCCEEEHHHHHHHHHHHHHCCHHHCCCCCCEEEECCCCCCCHHHCC
KNTEEQIKMCFEACRTDTWTVIFD
CCCHHHHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure
MNEKWLEWAIELQSIAQAGITYGKDIYDIERYERIREISAEMIAYKTDISTEKVRNLFCN
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC
ESGYQTPKLDTRAVIFENGKILLVKENTGKWSLPGGWVEVNLSVKENTIKEVKEEAGLDI
CCCCCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCEEEEEEEECHHHHHHHHHHHCCCE
TADRIIAIQDRAKHNLPIYAYGVCKIFVLCTVIGGTFKENIETTEFSYFSENELPELATE
ECCEEEEEECCCCCCCCEEEHHHHHHHHHHHHHCCHHHCCCCCCEEEECCCCCCCHHHCC
KNTEEQIKMCFEACRTDTWTVIFD
CCCHHHHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]