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The map label for this gene is 126697978

Identifier: 126697978

GI number: 126697978

Start: 480966

End: 481745

Strand: Direct

Name: 126697978

Synonym: CD0409

Alternate gene names: NA

Gene position: 480966-481745 (Clockwise)

Preceding gene: 126697977

Following gene: 126697979

Centisome position: 11.21

GC content: 32.69

Gene sequence:

>780_bases
ATGGACTTTGACTATTTCTATAACAGAGAAGCAGAAAGATTTAACTTTCTAAAAGTACCTGAAATATTGGTAGACGGAGA
AGAATTTAAGGGACTGTCTGCTGAAGCAATTATCCTTTATTCTATGCTTTTGAAACGAACAGGAATGTCCTTTAAGAATA
ATTGGGTGGACAAGGAAGGCAGAGTATTTATCTATTTCACAGTCGAAGAAATTATGAGAAGAAGAAATATCTCAAAGCCG
ACAGCTATAAAAACATTAGATGAACTCGATATGAAAAAAGGAATCGGACTGATTGAAAGAGTAAGGCTTGGGCTTGGTAA
GCCGAATGTCATATATGTTAAAGACTTTATGAGCATATTAGCGGTAAAAGAAAATGACTTTCAGAAGTCAAAAAACTTAA
CTTCAGAAGTAAAAGATTTTAATCTCAGAAGTAAAGAAAATGAACTTCAGGAAGTTCAAAATCTTGACTCTAACTATATA
GAGAATAATAAGAGTAAGTATAGTAAGAGAGAATATAGTTTTAGCGAAAACGGACTTGGAACATTTCAAAATGTATTTTT
AACGGCAGAAGATATATCCGATTTACAAATCATAATGAACTCACAGCTTGATAATTACATTGAAAGACTATCAGCATATA
TCAAAAGCACCGGAAAGACCTATAAAGACCATAAAGCGACAATCCTTTCTTGGTTTTATAAAGATCAGGGAAGAAGTAAA
AAAGTGAAAACATCAAATATCCCGACATGGGAAGAATATGATAAAGGAGAACACCTATGA

Upstream 100 bases:

>100_bases
AAAATCAATCTAAAAAATTTCATAAAAATGGTTACCAAAGGCGATAGAAGAAAAACTATCGTCTTTTTCTTTGCAAATTT
TTTGGGGAGGAGGTGAAGCG

Downstream 100 bases:

>100_bases
TGAAAGAATTAAAAAAAGTAATGATAGAAGATGTAGAGTATTCTTACGATCCTGAAAAAGAATATATCAAGGATGGACAC
GCATTTTGTAAAGTTTGCCA

Product: replication initiation protein

Products: NA

Alternate protein names: Replication Initiator Protein; Phage Protein; Replication Initiator; Replication-Associated Protein RepA; Replication Initiator A Domain-Containing Protein; Replication Initiation Protein

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MDFDYFYNREAERFNFLKVPEILVDGEEFKGLSAEAIILYSMLLKRTGMSFKNNWVDKEGRVFIYFTVEEIMRRRNISKP
TAIKTLDELDMKKGIGLIERVRLGLGKPNVIYVKDFMSILAVKENDFQKSKNLTSEVKDFNLRSKENELQEVQNLDSNYI
ENNKSKYSKREYSFSENGLGTFQNVFLTAEDISDLQIIMNSQLDNYIERLSAYIKSTGKTYKDHKATILSWFYKDQGRSK
KVKTSNIPTWEEYDKGEHL

Sequences:

>Translated_259_residues
MDFDYFYNREAERFNFLKVPEILVDGEEFKGLSAEAIILYSMLLKRTGMSFKNNWVDKEGRVFIYFTVEEIMRRRNISKP
TAIKTLDELDMKKGIGLIERVRLGLGKPNVIYVKDFMSILAVKENDFQKSKNLTSEVKDFNLRSKENELQEVQNLDSNYI
ENNKSKYSKREYSFSENGLGTFQNVFLTAEDISDLQIIMNSQLDNYIERLSAYIKSTGKTYKDHKATILSWFYKDQGRSK
KVKTSNIPTWEEYDKGEHL
>Mature_259_residues
MDFDYFYNREAERFNFLKVPEILVDGEEFKGLSAEAIILYSMLLKRTGMSFKNNWVDKEGRVFIYFTVEEIMRRRNISKP
TAIKTLDELDMKKGIGLIERVRLGLGKPNVIYVKDFMSILAVKENDFQKSKNLTSEVKDFNLRSKENELQEVQNLDSNYI
ENNKSKYSKREYSFSENGLGTFQNVFLTAEDISDLQIIMNSQLDNYIERLSAYIKSTGKTYKDHKATILSWFYKDQGRSK
KVKTSNIPTWEEYDKGEHL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30418; Mature: 30418

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFDYFYNREAERFNFLKVPEILVDGEEFKGLSAEAIILYSMLLKRTGMSFKNNWVDKEG
CCCCHHHCCCHHHCCCEECCHHEECCHHHCCCCHHHHHHHHHHHHHHCCCHHCCCCCCCC
RVFIYFTVEEIMRRRNISKPTAIKTLDELDMKKGIGLIERVRLGLGKPNVIYVKDFMSIL
CEEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEHHHHHHHH
AVKENDFQKSKNLTSEVKDFNLRSKENELQEVQNLDSNYIENNKSKYSKREYSFSENGLG
HHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHCCHHHHHHHHCCCCCCCCC
TFQNVFLTAEDISDLQIIMNSQLDNYIERLSAYIKSTGKTYKDHKATILSWFYKDQGRSK
HHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
KVKTSNIPTWEEYDKGEHL
CCCCCCCCCHHHCCCCCCC
>Mature Secondary Structure
MDFDYFYNREAERFNFLKVPEILVDGEEFKGLSAEAIILYSMLLKRTGMSFKNNWVDKEG
CCCCHHHCCCHHHCCCEECCHHEECCHHHCCCCHHHHHHHHHHHHHHCCCHHCCCCCCCC
RVFIYFTVEEIMRRRNISKPTAIKTLDELDMKKGIGLIERVRLGLGKPNVIYVKDFMSIL
CEEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEHHHHHHHH
AVKENDFQKSKNLTSEVKDFNLRSKENELQEVQNLDSNYIENNKSKYSKREYSFSENGLG
HHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHCCHHHHHHHHCCCCCCCCC
TFQNVFLTAEDISDLQIIMNSQLDNYIERLSAYIKSTGKTYKDHKATILSWFYKDQGRSK
HHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
KVKTSNIPTWEEYDKGEHL
CCCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA