Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

Click here to switch to the map view.

The map label for this gene is 126697977

Identifier: 126697977

GI number: 126697977

Start: 480597

End: 480878

Strand: Direct

Name: 126697977

Synonym: CD0408A

Alternate gene names: NA

Gene position: 480597-480878 (Clockwise)

Preceding gene: 126697976

Following gene: 126697978

Centisome position: 11.2

GC content: 32.98

Gene sequence:

>282_bases
ATGAGATGGATAATAAAAATAATCTTATTTCCAATCAGCTTGCTGCTGAGTATCCTTACTGCCTTTCTGACATTTATACT
TGGCATAGGAACAACTATTCTGTATTTCTTAATGCTGATGTGTATAGTTGCTGCAATAGGATCATTTATGCAAAAAGATA
TATCACTTGGCATTGAGGCATTGGTATTAGGATTTTTGTTAAGTCCTTATGGAATACCAATGGTTGGAGCAACAGTTATA
GCTTTTTTACAAGGTATCAATGAGGCAATAAAATCAATCTAA

Upstream 100 bases:

>100_bases
ACGAAAAAAAGTCCTAAAAAATTATATAGATGTGAATGTTTGCATTGATATGGTGTGTGGAGATACAAAGTATGAATTGG
GAAGTGAGGAATAAGAAATG

Downstream 100 bases:

>100_bases
AAAATTTCATAAAAATGGTTACCAAAGGCGATAGAAGAAAAACTATCGTCTTTTTCTTTGCAAATTTTTTGGGGAGGAGG
TGAAGCGATGGACTTTGACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MRWIIKIILFPISLLLSILTAFLTFILGIGTTILYFLMLMCIVAAIGSFMQKDISLGIEALVLGFLLSPYGIPMVGATVI
AFLQGINEAIKSI

Sequences:

>Translated_93_residues
MRWIIKIILFPISLLLSILTAFLTFILGIGTTILYFLMLMCIVAAIGSFMQKDISLGIEALVLGFLLSPYGIPMVGATVI
AFLQGINEAIKSI
>Mature_93_residues
MRWIIKIILFPISLLLSILTAFLTFILGIGTTILYFLMLMCIVAAIGSFMQKDISLGIEALVLGFLLSPYGIPMVGATVI
AFLQGINEAIKSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10122; Mature: 10122

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWIIKIILFPISLLLSILTAFLTFILGIGTTILYFLMLMCIVAAIGSFMQKDISLGIEA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVLGFLLSPYGIPMVGATVIAFLQGINEAIKSI
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRWIIKIILFPISLLLSILTAFLTFILGIGTTILYFLMLMCIVAAIGSFMQKDISLGIEA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVLGFLLSPYGIPMVGATVIAFLQGINEAIKSI
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA