Click here to switch to the map view.

The map label for this gene is etfB1 [H]

Identifier: 126697969

GI number: 126697969

Start: 472653

End: 473438

Strand: Direct

Name: etfB1 [H]

Synonym: CD0400

Alternate gene names: 126697969

Gene position: 472653-473438 (Clockwise)

Preceding gene: 126697968

Following gene: 126697970

Centisome position: 11.02

GC content: 31.81

Gene sequence:

>786_bases
TTGAAAATATTAGTTTGCGTAAAACAAGTTCCAGATACTAACGAAGTAAGAATAAATAAAGAAACAGGTACTCTTATAAG
AGATGGAGTTCCAAGTATATTAAACCCAGATGATGCAAATGCATTAGAGGAAGCTTTAAAAATTAAAGATGAGCATGATG
ATGTAACTATAACAGTTATAACAATGGGACCTCCTCAAGCAGACTTTATGCTAAGAGAGTGTTTAGCTATGGGTGCTGAT
GATGCAATATTATTAAGTGATAGAGCATTTGGAGGAGCTGATACTTGGGCTACATCAAATACTATTGCAGCGGGAATATC
TAAAGTAGGTGACTATGACATAATATTTGCAGGAAGACAAGCAATAGATGGAGATACTGCACAAGTTGGACCACAAATTG
CAGAGAAATTAGACATTCCTCAAGTTACATATGTACAAGATTTCAAAATAGAAGGAAAAGATATAATAGTTCAAAGACAA
TTAGAAGATGGATACGAATTAATAAAAGTAAGTACACCTGTACTTTTAACAGCAGTAAAAGAGTTAAATACACCTAGATA
CATGTCTGTTGATAAAATAGTAAAAGCATATAAACATGATGTAAAAGTTTGGACAATTGATGATTTAGATGTAAATAAAG
AAGAAGTTGGTTTAAAAGCATCACCAACTAAAGTATTTAGATCATTTACTCCTGAACCAAGAGGAAAAGGAGAAATCTTA
GAAGGTAAAGCTGATGAAATAGCTAGTAAAATAATAATCGGTCTAAAACAAAAGCACATTATATAA

Upstream 100 bases:

>100_bases
TCGTATCAATATACGAAGGAACATCAGAAGTTCAAAAAATGGTAATTTCATCAAACGTATTAAAATAATAAATAATCTAA
TGAAATTGGAGGTATAGACT

Downstream 100 bases:

>100_bases
GTTGGAGGAGTACAAACTATGAATGATATAAAAGATTTAAGTTCTTATAAAAACGTATGGATATTTGCAGAACAAAGAGA
AGGAAAAATAGCTCCAGTAG

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MKILVCVKQVPDTNEVRINKETGTLIRDGVPSILNPDDANALEEALKIKDEHDDVTITVITMGPPQADFMLRECLAMGAD
DAILLSDRAFGGADTWATSNTIAAGISKVGDYDIIFAGRQAIDGDTAQVGPQIAEKLDIPQVTYVQDFKIEGKDIIVQRQ
LEDGYELIKVSTPVLLTAVKELNTPRYMSVDKIVKAYKHDVKVWTIDDLDVNKEEVGLKASPTKVFRSFTPEPRGKGEIL
EGKADEIASKIIIGLKQKHII

Sequences:

>Translated_261_residues
MKILVCVKQVPDTNEVRINKETGTLIRDGVPSILNPDDANALEEALKIKDEHDDVTITVITMGPPQADFMLRECLAMGAD
DAILLSDRAFGGADTWATSNTIAAGISKVGDYDIIFAGRQAIDGDTAQVGPQIAEKLDIPQVTYVQDFKIEGKDIIVQRQ
LEDGYELIKVSTPVLLTAVKELNTPRYMSVDKIVKAYKHDVKVWTIDDLDVNKEEVGLKASPTKVFRSFTPEPRGKGEIL
EGKADEIASKIIIGLKQKHII
>Mature_261_residues
MKILVCVKQVPDTNEVRINKETGTLIRDGVPSILNPDDANALEEALKIKDEHDDVTITVITMGPPQADFMLRECLAMGAD
DAILLSDRAFGGADTWATSNTIAAGISKVGDYDIIFAGRQAIDGDTAQVGPQIAEKLDIPQVTYVQDFKIEGKDIIVQRQ
LEDGYELIKVSTPVLLTAVKELNTPRYMSVDKIVKAYKHDVKVWTIDDLDVNKEEVGLKASPTKVFRSFTPEPRGKGEIL
EGKADEIASKIIIGLKQKHII

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=215, Percent_Identity=31.1627906976744, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI62420877, Length=201, Percent_Identity=30.3482587064677, Blast_Score=99, Evalue=5e-21,
Organism=Escherichia coli, GI2367123, Length=227, Percent_Identity=28.1938325991189, Blast_Score=94, Evalue=6e-21,
Organism=Escherichia coli, GI87081682, Length=217, Percent_Identity=29.0322580645161, Blast_Score=84, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI25141345, Length=216, Percent_Identity=34.2592592592593, Blast_Score=115, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6321646, Length=256, Percent_Identity=30.078125, Blast_Score=100, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24651147, Length=213, Percent_Identity=32.8638497652582, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24651145, Length=213, Percent_Identity=32.8638497652582, Blast_Score=94, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 28671; Mature: 28671

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVCVKQVPDTNEVRINKETGTLIRDGVPSILNPDDANALEEALKIKDEHDDVTITVI
CEEEEEEECCCCCCCEEEECCCCCEECCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEE
TMGPPQADFMLRECLAMGADDAILLSDRAFGGADTWATSNTIAAGISKVGDYDIIFAGRQ
ECCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCC
AIDGDTAQVGPQIAEKLDIPQVTYVQDFKIEGKDIIVQRQLEDGYELIKVSTPVLLTAVK
CCCCCHHHCCHHHHHHCCCCCEEEEEEEEECCCEEEEEEEHHCCEEEEEECCHHHHHHHH
ELNTPRYMSVDKIVKAYKHDVKVWTIDDLDVNKEEVGLKASPTKVFRSFTPEPRGKGEIL
HCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHCCCCCCHHHHHHHCCCCCCCCCCEE
EGKADEIASKIIIGLKQKHII
CCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKILVCVKQVPDTNEVRINKETGTLIRDGVPSILNPDDANALEEALKIKDEHDDVTITVI
CEEEEEEECCCCCCCEEEECCCCCEECCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEE
TMGPPQADFMLRECLAMGADDAILLSDRAFGGADTWATSNTIAAGISKVGDYDIIFAGRQ
ECCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCC
AIDGDTAQVGPQIAEKLDIPQVTYVQDFKIEGKDIIVQRQLEDGYELIKVSTPVLLTAVK
CCCCCHHHCCHHHHHHCCCCCEEEEEEEEECCCEEEEEEEHHCCEEEEEECCHHHHHHHH
ELNTPRYMSVDKIVKAYKHDVKVWTIDDLDVNKEEVGLKASPTKVFRSFTPEPRGKGEIL
HCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHCCCCCCHHHHHHHCCCCCCCCCCEE
EGKADEIASKIIIGLKQKHII
CCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8655474; 11466286 [H]