Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126697919

Identifier: 126697919

GI number: 126697919

Start: 422833

End: 423795

Strand: Direct

Name: 126697919

Synonym: CD0347

Alternate gene names: NA

Gene position: 422833-423795 (Clockwise)

Preceding gene: 126697918

Following gene: 126697920

Centisome position: 9.86

GC content: 23.88

Gene sequence:

>963_bases
TTGAGAAAGGAGACACGACTTATGAGGTGGATATTAGTTTTTATATTTTTATATCTTATTCCTTTAGTAGTGATATTCAG
AAATTACAAGAATTTTAAGAGGTCTTGTATCTACAGTAGTATTTATGTGGTATTAGCTACAACAATAATGATAAGTAATA
TTTATATGAGTGGACTTAATAAAATAAAAGAGTCTATGTATTATCACAATTATATTTCTGATGAGACATATGATGAAAAG
TATGTATCAAATTTTAAGGAAAAAGAAAGTACTGATTTAAAACAGGATAATAAAAAGAATGAAGAAATATCAAATAATAA
AAATTTAAACAACAAACAAGATAGAAATATACAAAATAAAGAAAGTAATGAAGAAGGAAGTAATGATATAAAAGAAAAGA
ATAATTCTGATAGTAATGTTTCAGTGAATAATAAATCAGAAAAACAAGAAGATAATACAAAAGAAAATAATAAATATACA
AGTAAAGAAAAAAATAGTGAAGATATAAAAAAAATAGATATGGAAAGTATAGGAATTTTTAAGAAAGAAATTTATAATAT
AGAAAGAGCAGCTTTAGTTCCAATGAGAGAATGCATACCTTACACTAAGGATATAGCAAAAAATATAACTAAATTATCTA
GTATAAAAAAAGATGTTACAAATGCCAGAAACAAGTGTAAAGAAGTTGTAAAAGAATATGAAAATATGCAGATTCCAGAA
CTTTCTAAGGAGAAGTATACAGAAACATTGAGTAATGCTAGAGATGACGTAAAGAAAGCATATGAGCTTAGAGAAAAATC
TATGGAAAGTGCTTTGAAATTAATAAATACTAAAAGCCCTAAATATATAGGGAAGATAACAGAATATCTTGATTTATCAG
ATAAGCAGATAGAAAGTTTTAAAAATAGATTGAACGATTTAAAAGAAGAAATAAATAATTCAGAAACAAATAATATTAAT
TGA

Upstream 100 bases:

>100_bases
ATACAGAATTTAATTTAATAAAAGTTCACGATTAAAAAACATAAATTGGTAAATACTATAAGATACATGATTAAAAATAA
ATATTTGAGGGATTTCGGTT

Downstream 100 bases:

>100_bases
TAAGATTTAAAGATATAAGTTAAAAGGGAGATTATGATGAATAAACAGAGTATAGGAAAACTAAATATGTTTTTTATGGG
GATTACTCAAAGAAACCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MRKETRLMRWILVFIFLYLIPLVVIFRNYKNFKRSCIYSSIYVVLATTIMISNIYMSGLNKIKESMYYHNYISDETYDEK
YVSNFKEKESTDLKQDNKKNEEISNNKNLNNKQDRNIQNKESNEEGSNDIKEKNNSDSNVSVNNKSEKQEDNTKENNKYT
SKEKNSEDIKKIDMESIGIFKKEIYNIERAALVPMRECIPYTKDIAKNITKLSSIKKDVTNARNKCKEVVKEYENMQIPE
LSKEKYTETLSNARDDVKKAYELREKSMESALKLINTKSPKYIGKITEYLDLSDKQIESFKNRLNDLKEEINNSETNNIN

Sequences:

>Translated_320_residues
MRKETRLMRWILVFIFLYLIPLVVIFRNYKNFKRSCIYSSIYVVLATTIMISNIYMSGLNKIKESMYYHNYISDETYDEK
YVSNFKEKESTDLKQDNKKNEEISNNKNLNNKQDRNIQNKESNEEGSNDIKEKNNSDSNVSVNNKSEKQEDNTKENNKYT
SKEKNSEDIKKIDMESIGIFKKEIYNIERAALVPMRECIPYTKDIAKNITKLSSIKKDVTNARNKCKEVVKEYENMQIPE
LSKEKYTETLSNARDDVKKAYELREKSMESALKLINTKSPKYIGKITEYLDLSDKQIESFKNRLNDLKEEINNSETNNIN
>Mature_320_residues
MRKETRLMRWILVFIFLYLIPLVVIFRNYKNFKRSCIYSSIYVVLATTIMISNIYMSGLNKIKESMYYHNYISDETYDEK
YVSNFKEKESTDLKQDNKKNEEISNNKNLNNKQDRNIQNKESNEEGSNDIKEKNNSDSNVSVNNKSEKQEDNTKENNKYT
SKEKNSEDIKKIDMESIGIFKKEIYNIERAALVPMRECIPYTKDIAKNITKLSSIKKDVTNARNKCKEVVKEYENMQIPE
LSKEKYTETLSNARDDVKKAYELREKSMESALKLINTKSPKYIGKITEYLDLSDKQIESFKNRLNDLKEEINNSETNNIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37762; Mature: 37762

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA