Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

Click here to switch to the map view.

The map label for this gene is yccG [H]

Identifier: 126697910

GI number: 126697910

Start: 411452

End: 412387

Strand: Direct

Name: yccG [H]

Synonym: CD0338

Alternate gene names: 126697910

Gene position: 411452-412387 (Clockwise)

Preceding gene: 126697906

Following gene: 126697911

Centisome position: 9.59

GC content: 23.18

Gene sequence:

>936_bases
ATGGCTAACAATTTTGTATTTCCTATAGTAATACTAACTTTGTTTATATTTAGCAATCTTATAATGAATAAGTATAAATT
TTACAAAGAATTAGACATATTAAAAAAAGGCATATTAACATTTTTTATATCGTGTTTTGCATTGATTTTATTTATGGAGG
GCACTAAATATATACAATTAAGGTTAGGATATAGTTTTTTACTTGAAGGAGTATTAAATATTATACTTTTTTTGGTTTTA
ATTATTTTAAGTTTTTATACAGGCTTTAAAGTTATAAGATTGATAAATAATAATAATGAACAGGAATATAAACTACAAAA
ACTAGATAGTAAAATAAATCATAAGGATAATATAATCATCAAATTAAGAAGTCAAAAACATGACTATTTGAAACATTTGC
AAGTGGTGTATTCTCTATTAAATACTGGGCTAGATGAAGATGCCAAAGAATATATAATGAATATATCAAATAGTTTTAAA
TCAAAAAATTCAAGGTATGGAAAAGTATCTTATTTAGATGCTATAGCTTCATTAAAATACGAGGAATGTCTTGAAAAGGA
TATATCTTTTGATGTCTACATTCAAGATTTTATGGATAATTTAGAGATTGAACCTAATGATATGAGTTCAGTACTATTAA
ACATAATAGATAATGCAATAGAGTCTTTGTCTACTATAAAAAAAGAAAAGAAGTATATAAGATTACATGCATATGAAGAT
GAATTTCAGTATATTATAGCTATAAAAAATAATGGTCCTAAAATACATAATGTTGAAAGTATATTTTGGAATGGATTTAG
TACTAAAGAAGGACAAGATAGGGGATATGGGCTACATTTAGTTAAAAATATATTAGATAAGTATGATTATAGTATACTTG
TAAATAGTGATGATTTTTTAACTGAATTTGTAATCTTAATCCCAAAATATTATTAG

Upstream 100 bases:

>100_bases
TTTTTACAAGTTTAATTAATCTATATGTAAATTTTAACTTTTTACATAATTTTTTTAAAATGATATAATCCCTATATAAA
TTGTAGAGGGGAGGGAAATC

Downstream 100 bases:

>100_bases
TTAGGAGGAGAAAAGTCTATGATAAAAGTTTTGATTTGTGATGATGATAAGATTGTAAGAGATGATATAGCAAATATAGC
TAAAGAGTCTGGATATGTAG

Product: two-component sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MANNFVFPIVILTLFIFSNLIMNKYKFYKELDILKKGILTFFISCFALILFMEGTKYIQLRLGYSFLLEGVLNIILFLVL
IILSFYTGFKVIRLINNNNEQEYKLQKLDSKINHKDNIIIKLRSQKHDYLKHLQVVYSLLNTGLDEDAKEYIMNISNSFK
SKNSRYGKVSYLDAIASLKYEECLEKDISFDVYIQDFMDNLEIEPNDMSSVLLNIIDNAIESLSTIKKEKKYIRLHAYED
EFQYIIAIKNNGPKIHNVESIFWNGFSTKEGQDRGYGLHLVKNILDKYDYSILVNSDDFLTEFVILIPKYY

Sequences:

>Translated_311_residues
MANNFVFPIVILTLFIFSNLIMNKYKFYKELDILKKGILTFFISCFALILFMEGTKYIQLRLGYSFLLEGVLNIILFLVL
IILSFYTGFKVIRLINNNNEQEYKLQKLDSKINHKDNIIIKLRSQKHDYLKHLQVVYSLLNTGLDEDAKEYIMNISNSFK
SKNSRYGKVSYLDAIASLKYEECLEKDISFDVYIQDFMDNLEIEPNDMSSVLLNIIDNAIESLSTIKKEKKYIRLHAYED
EFQYIIAIKNNGPKIHNVESIFWNGFSTKEGQDRGYGLHLVKNILDKYDYSILVNSDDFLTEFVILIPKYY
>Mature_310_residues
ANNFVFPIVILTLFIFSNLIMNKYKFYKELDILKKGILTFFISCFALILFMEGTKYIQLRLGYSFLLEGVLNIILFLVLI
ILSFYTGFKVIRLINNNNEQEYKLQKLDSKINHKDNIIIKLRSQKHDYLKHLQVVYSLLNTGLDEDAKEYIMNISNSFKS
KNSRYGKVSYLDAIASLKYEECLEKDISFDVYIQDFMDNLEIEPNDMSSVLLNIIDNAIESLSTIKKEKKYIRLHAYEDE
FQYIIAIKNNGPKIHNVESIFWNGFSTKEGQDRGYGLHLVKNILDKYDYSILVNSDDFLTEFVILIPKYY

Specific function: Could be member of the two-component regulatory system yccG/yccH. Potentially phosphorylates yccH [H]

COG id: COG3290

COG function: function code T; Signal transduction histidine kinase regulating citrate/malate metabolism

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594 [H]

Pfam domain/function: PF02518 HATPase_c [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 36532; Mature: 36401

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANNFVFPIVILTLFIFSNLIMNKYKFYKELDILKKGILTFFISCFALILFMEGTKYIQL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
RLGYSFLLEGVLNIILFLVLIILSFYTGFKVIRLINNNNEQEYKLQKLDSKINHKDNIII
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHEECCCCHHHHHHHHHHHHCCCCCCEEE
KLRSQKHDYLKHLQVVYSLLNTGLDEDAKEYIMNISNSFKSKNSRYGKVSYLDAIASLKY
EEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCH
EECLEKDISFDVYIQDFMDNLEIEPNDMSSVLLNIIDNAIESLSTIKKEKKYIRLHAYED
HHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEC
EFQYIIAIKNNGPKIHNVESIFWNGFSTKEGQDRGYGLHLVKNILDKYDYSILVNSDDFL
CEEEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCHHH
TEFVILIPKYY
HHHHHHCCCCC
>Mature Secondary Structure 
ANNFVFPIVILTLFIFSNLIMNKYKFYKELDILKKGILTFFISCFALILFMEGTKYIQL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
RLGYSFLLEGVLNIILFLVLIILSFYTGFKVIRLINNNNEQEYKLQKLDSKINHKDNIII
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHEECCCCHHHHHHHHHHHHCCCCCCEEE
KLRSQKHDYLKHLQVVYSLLNTGLDEDAKEYIMNISNSFKSKNSRYGKVSYLDAIASLKY
EEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCH
EECLEKDISFDVYIQDFMDNLEIEPNDMSSVLLNIIDNAIESLSTIKKEKKYIRLHAYED
HHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEC
EFQYIIAIKNNGPKIHNVESIFWNGFSTKEGQDRGYGLHLVKNILDKYDYSILVNSDDFL
CEEEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCHHH
TEFVILIPKYY
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9106203; 9274031; 9384377 [H]