| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126697879
Identifier: 126697879
GI number: 126697879
Start: 369408
End: 369851
Strand: Direct
Name: 126697879
Synonym: CD0307
Alternate gene names: NA
Gene position: 369408-369851 (Clockwise)
Preceding gene: 126697878
Following gene: 126697880
Centisome position: 8.61
GC content: 30.86
Gene sequence:
>444_bases ATGTACAGTAATACTTATAATAATGAAAATTTTATGAGAGCAAGAGCATTCATAGAAAATAGTGAATTTAAAAAAGCATA TGATTTTTTAAAAACTTTGACTGACAAATGTGCAGAGTGGTATTATTTAACTGGCTTTTCTGCAATGAACATAGGATATT ATGAAGAAGGTGAAGACTTCTTAAAAAGAGCAAAATTTATGGAGCCTGAAAATAGTGAATATAGTGATGCACTTAGAAGT TATACACAATATAGAAATGATTACAGCAATAGGGCTGACAATTATAATAGAAGAAGACGTAATGATTTAGATGGATGTTG TTGCTGTTGCTGTGATGATTGCTGTTGTTGTCTAGGTGACGATTGTTGTGAAAATTGTGCTAAGCTTTGGTGTTTAGATT CATGTTGTGAATGTTTTGGTGGAGATTTAATAACTTGTTGTTAG
Upstream 100 bases:
>100_bases AATCTAAATCTAAATAAAAATGTTGGAATAATAGAAAATATAATTTATTCTGGTGTTTATTTAAGATATATTAATATATT AGAAAGTAGAGGTGGAAAGA
Downstream 100 bases:
>100_bases GATGATAAATATGAGTATAAAAGTTGCTTATGGAGGAGTTTTATTAGCATTAAATGTGATATTGTTGACTCTTACAAATA TTATTCCTGTAAATACATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MYSNTYNNENFMRARAFIENSEFKKAYDFLKTLTDKCAEWYYLTGFSAMNIGYYEEGEDFLKRAKFMEPENSEYSDALRS YTQYRNDYSNRADNYNRRRRNDLDGCCCCCCDDCCCCLGDDCCENCAKLWCLDSCCECFGGDLITCC
Sequences:
>Translated_147_residues MYSNTYNNENFMRARAFIENSEFKKAYDFLKTLTDKCAEWYYLTGFSAMNIGYYEEGEDFLKRAKFMEPENSEYSDALRS YTQYRNDYSNRADNYNRRRRNDLDGCCCCCCDDCCCCLGDDCCENCAKLWCLDSCCECFGGDLITCC >Mature_147_residues MYSNTYNNENFMRARAFIENSEFKKAYDFLKTLTDKCAEWYYLTGFSAMNIGYYEEGEDFLKRAKFMEPENSEYSDALRS YTQYRNDYSNRADNYNRRRRNDLDGCCCCCCDDCCCCLGDDCCENCAKLWCLDSCCECFGGDLITCC
Specific function: Unknown
COG id: COG2214
COG function: function code O; DnaJ-class molecular chaperone
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17255; Mature: 17255
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: PS00317 4_DISULFIDE_CORE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
13.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 16.3 %Cys+Met (Translated Protein) 13.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 16.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSNTYNNENFMRARAFIENSEFKKAYDFLKTLTDKCAEWYYLTGFSAMNIGYYEEGEDF CCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHH LKRAKFMEPENSEYSDALRSYTQYRNDYSNRADNYNRRRRNDLDGCCCCCCDDCCCCLGD HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCH DCCENCAKLWCLDSCCECFGGDLITCC HHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MYSNTYNNENFMRARAFIENSEFKKAYDFLKTLTDKCAEWYYLTGFSAMNIGYYEEGEDF CCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHH LKRAKFMEPENSEYSDALRSYTQYRNDYSNRADNYNRRRRNDLDGCCCCCCDDCCCCLGD HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCH DCCENCAKLWCLDSCCECFGGDLITCC HHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA