Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126697879

Identifier: 126697879

GI number: 126697879

Start: 369408

End: 369851

Strand: Direct

Name: 126697879

Synonym: CD0307

Alternate gene names: NA

Gene position: 369408-369851 (Clockwise)

Preceding gene: 126697878

Following gene: 126697880

Centisome position: 8.61

GC content: 30.86

Gene sequence:

>444_bases
ATGTACAGTAATACTTATAATAATGAAAATTTTATGAGAGCAAGAGCATTCATAGAAAATAGTGAATTTAAAAAAGCATA
TGATTTTTTAAAAACTTTGACTGACAAATGTGCAGAGTGGTATTATTTAACTGGCTTTTCTGCAATGAACATAGGATATT
ATGAAGAAGGTGAAGACTTCTTAAAAAGAGCAAAATTTATGGAGCCTGAAAATAGTGAATATAGTGATGCACTTAGAAGT
TATACACAATATAGAAATGATTACAGCAATAGGGCTGACAATTATAATAGAAGAAGACGTAATGATTTAGATGGATGTTG
TTGCTGTTGCTGTGATGATTGCTGTTGTTGTCTAGGTGACGATTGTTGTGAAAATTGTGCTAAGCTTTGGTGTTTAGATT
CATGTTGTGAATGTTTTGGTGGAGATTTAATAACTTGTTGTTAG

Upstream 100 bases:

>100_bases
AATCTAAATCTAAATAAAAATGTTGGAATAATAGAAAATATAATTTATTCTGGTGTTTATTTAAGATATATTAATATATT
AGAAAGTAGAGGTGGAAAGA

Downstream 100 bases:

>100_bases
GATGATAAATATGAGTATAAAAGTTGCTTATGGAGGAGTTTTATTAGCATTAAATGTGATATTGTTGACTCTTACAAATA
TTATTCCTGTAAATACATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MYSNTYNNENFMRARAFIENSEFKKAYDFLKTLTDKCAEWYYLTGFSAMNIGYYEEGEDFLKRAKFMEPENSEYSDALRS
YTQYRNDYSNRADNYNRRRRNDLDGCCCCCCDDCCCCLGDDCCENCAKLWCLDSCCECFGGDLITCC

Sequences:

>Translated_147_residues
MYSNTYNNENFMRARAFIENSEFKKAYDFLKTLTDKCAEWYYLTGFSAMNIGYYEEGEDFLKRAKFMEPENSEYSDALRS
YTQYRNDYSNRADNYNRRRRNDLDGCCCCCCDDCCCCLGDDCCENCAKLWCLDSCCECFGGDLITCC
>Mature_147_residues
MYSNTYNNENFMRARAFIENSEFKKAYDFLKTLTDKCAEWYYLTGFSAMNIGYYEEGEDFLKRAKFMEPENSEYSDALRS
YTQYRNDYSNRADNYNRRRRNDLDGCCCCCCDDCCCCLGDDCCENCAKLWCLDSCCECFGGDLITCC

Specific function: Unknown

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17255; Mature: 17255

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: PS00317 4_DISULFIDE_CORE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

13.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
16.3 %Cys+Met (Translated Protein)
13.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
16.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSNTYNNENFMRARAFIENSEFKKAYDFLKTLTDKCAEWYYLTGFSAMNIGYYEEGEDF
CCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHH
LKRAKFMEPENSEYSDALRSYTQYRNDYSNRADNYNRRRRNDLDGCCCCCCDDCCCCLGD
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCH
DCCENCAKLWCLDSCCECFGGDLITCC
HHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MYSNTYNNENFMRARAFIENSEFKKAYDFLKTLTDKCAEWYYLTGFSAMNIGYYEEGEDF
CCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHH
LKRAKFMEPENSEYSDALRSYTQYRNDYSNRADNYNRRRRNDLDGCCCCCCDDCCCCLGD
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCH
DCCENCAKLWCLDSCCECFGGDLITCC
HHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA