Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126697878

Identifier: 126697878

GI number: 126697878

Start: 368579

End: 369418

Strand: Direct

Name: 126697878

Synonym: CD0306

Alternate gene names: NA

Gene position: 368579-369418 (Clockwise)

Preceding gene: 126697877

Following gene: 126697879

Centisome position: 8.59

GC content: 22.86

Gene sequence:

>840_bases
ATGTTTGGATATGTTAAAATAAACAAAATGGATTTAACATTTAGAGAATATGATTATTACAAAGCTTACTATTGTGGACT
ATGTAAATACTTAAAAAGAAATCATGGAGAAATCTCTAGGTTTTCTTTGAACTATGATATAACATTTTTAATTGTTTTAT
TAACAGCAGTATATAACCCAGAGTCTATAAGTACAGAGGAAGTGTGTATAGTAAATCCATTTAAAAAGAAAAAGGTAATT
ACAAATGATATTACAGAATATGCAGCAAGTATGAATATTCTTTTAACGTATTATAAATTGGAAGATAATTTAATGGATGA
TAAACGCATAAAAGATAAATTGGCATATTATATATATAAAAACAAATTAAAATTAGCATATGAAAAGTATCCTGAAAAAG
CAGAGTATATAAAACAACAACTAAATGAATTAAATAAGTTAGAAAAAGATAAAAATATAAATATAGATGAAGTATCTAGT
ATATTTGGAAATATAATGGGTGAAGTATTTGTCTATAAAAAAGATGAAAATGAGAGAAACTTAAGAATGATAGGTTTTAA
TATAGGTAAGTATATATATCTACTAGATGCCTATGAAGATTTAGATGAAGATTTTAAGAAAGGAAGATATAATCCATTTA
TAGAGTATATTGATAAAAATGATGAGTTAAAAGAAAAAGTAAAAAAAATAATAGTAACATCATTAGGGTTTTTAGCTAGG
GGAATTGATAATCTAAATCTAAATAAAAATGTTGGAATAATAGAAAATATAATTTATTCTGGTGTTTATTTAAGATATAT
TAATATATTAGAAAGTAGAGGTGGAAAGAATGTACAGTAA

Upstream 100 bases:

>100_bases
ATTTTTTAAGTTTCTTAGAATACTGTAAATTATATAATCTTGATAAAAAGTGTTATACTATATATAATCTAAATAAAAAA
TAGTACAAAAAGGAGTATTT

Downstream 100 bases:

>100_bases
TACTTATAATAATGAAAATTTTATGAGAGCAAGAGCATTCATAGAAAATAGTGAATTTAAAAAAGCATATGATTTTTTAA
AAACTTTGACTGACAAATGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MFGYVKINKMDLTFREYDYYKAYYCGLCKYLKRNHGEISRFSLNYDITFLIVLLTAVYNPESISTEEVCIVNPFKKKKVI
TNDITEYAASMNILLTYYKLEDNLMDDKRIKDKLAYYIYKNKLKLAYEKYPEKAEYIKQQLNELNKLEKDKNINIDEVSS
IFGNIMGEVFVYKKDENERNLRMIGFNIGKYIYLLDAYEDLDEDFKKGRYNPFIEYIDKNDELKEKVKKIIVTSLGFLAR
GIDNLNLNKNVGIIENIIYSGVYLRYINILESRGGKNVQ

Sequences:

>Translated_279_residues
MFGYVKINKMDLTFREYDYYKAYYCGLCKYLKRNHGEISRFSLNYDITFLIVLLTAVYNPESISTEEVCIVNPFKKKKVI
TNDITEYAASMNILLTYYKLEDNLMDDKRIKDKLAYYIYKNKLKLAYEKYPEKAEYIKQQLNELNKLEKDKNINIDEVSS
IFGNIMGEVFVYKKDENERNLRMIGFNIGKYIYLLDAYEDLDEDFKKGRYNPFIEYIDKNDELKEKVKKIIVTSLGFLAR
GIDNLNLNKNVGIIENIIYSGVYLRYINILESRGGKNVQ
>Mature_279_residues
MFGYVKINKMDLTFREYDYYKAYYCGLCKYLKRNHGEISRFSLNYDITFLIVLLTAVYNPESISTEEVCIVNPFKKKKVI
TNDITEYAASMNILLTYYKLEDNLMDDKRIKDKLAYYIYKNKLKLAYEKYPEKAEYIKQQLNELNKLEKDKNINIDEVSS
IFGNIMGEVFVYKKDENERNLRMIGFNIGKYIYLLDAYEDLDEDFKKGRYNPFIEYIDKNDELKEKVKKIIVTSLGFLAR
GIDNLNLNKNVGIIENIIYSGVYLRYINILESRGGKNVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33047; Mature: 33047

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGYVKINKMDLTFREYDYYKAYYCGLCKYLKRNHGEISRFSLNYDITFLIVLLTAVYNP
CCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCC
ESISTEEVCIVNPFKKKKVITNDITEYAASMNILLTYYKLEDNLMDDKRIKDKLAYYIYK
CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHH
NKLKLAYEKYPEKAEYIKQQLNELNKLEKDKNINIDEVSSIFGNIMGEVFVYKKDENERN
HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCC
LRMIGFNIGKYIYLLDAYEDLDEDFKKGRYNPFIEYIDKNDELKEKVKKIIVTSLGFLAR
EEEEEEECCCEEEEEECHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHH
GIDNLNLNKNVGIIENIIYSGVYLRYINILESRGGKNVQ
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MFGYVKINKMDLTFREYDYYKAYYCGLCKYLKRNHGEISRFSLNYDITFLIVLLTAVYNP
CCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCC
ESISTEEVCIVNPFKKKKVITNDITEYAASMNILLTYYKLEDNLMDDKRIKDKLAYYIYK
CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHH
NKLKLAYEKYPEKAEYIKQQLNELNKLEKDKNINIDEVSSIFGNIMGEVFVYKKDENERN
HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCC
LRMIGFNIGKYIYLLDAYEDLDEDFKKGRYNPFIEYIDKNDELKEKVKKIIVTSLGFLAR
EEEEEEECCCEEEEEECHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHH
GIDNLNLNKNVGIIENIIYSGVYLRYINILESRGGKNVQ
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA