Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is flgK [H]

Identifier: 126697802

GI number: 126697802

Start: 295310

End: 296620

Strand: Direct

Name: flgK [H]

Synonym: CD0231

Alternate gene names: 126697802

Gene position: 295310-296620 (Clockwise)

Preceding gene: 126697801

Following gene: 126697803

Centisome position: 6.88

GC content: 30.66

Gene sequence:

>1311_bases
ATGGCAGGATTATTTTCCATTTTAAATACAGCTAATTCAGGAATGAATGCGCACCAAAAATCAATACAGACAATTTCTCA
TAATATAAGTAACCTAGATACAGATGGTTATTCTAGGCAAAGGACCGAATTTGCTACAAATAGTCCAATGTATATGCCTA
GTTTGAGCAATTCAATTGGAAGAGGACAATTAGGTACTGGAGTCCATGTAACAGATGTAACAAGAGCTAGAAATAGTTTT
TATGATTACCAATTTAGGGCAGAAGCTCATAAGTATGGGAATACAGTTTCAAAATATGATTATTATAATACTATAGAAAC
TATACTAAATGAACCATCAGACTATGGAATATCTGCAGGTATAGATGATTTTTTTAAAGGATGGGAGTCATTATCAAAGG
ATATAAATAGTGATAATAAAAAAAGTCTAGTGGTAGAAAATGCATCTAATTTAGCGACTTTAATAAGCGAAAGTTATAAG
AAGCTTGACAAGTTAAAAGGAGATATAGATTCTAATATAGATACTGAAATAAAACAAATAAATGACATGTTAAAAAGTCT
TGAAGACTTAAATAAATCTATTGATATTATCTCTGGTTCTGGCTCTACACCAAATGATTTGCTTGATGAAAGAGATAGAA
TATTGGATAACTTGAGTTTTAAGTTAGACCTTGAAAATAGTGATGTTAAAAATATGCTTTCAGATGGTAAATTGGAACTT
AATGAGTTGAAAAATGCAGATGGAACTTGGAAAACAGGTATATCAGGAACTTTACAAGGCTTGTTTGAAATGCACGGTAA
AATTGATACATATAAAAGCGACTTAAAAGATGTATCTGATGGATTAGCAAAACAGATAAATGATGTTTATAATTCATCTG
CTGGAATAACTGTAAGAGATTTTTTTATAACCTCAAATGTAGCTGGTGAAGATATTATAAAAGTAAATCCAGCAATAAAA
AGTAATTCAAATGAATTGAAGCTTACTACTGAAGAAGCTTCAAAGATTGCTAAGTTAAAGGATGAAAAAATAGATATTGG
GGTAGCTGGTGGAAAAGTAAGCACAATAAGTGACCACTACAAGGCTTTTGCAGAATCGGTAGGTTTAGATTCTCAAAAAG
TTAATCAAGATGAAGTGAATCAACGTAAAATTATAAATAATGTTGATAATTCACGAATGAGTGTTTCAGGTGTATCTTTA
GATGAAGAAATGACAGAACTCATGAAAGTACAACGTTCCTATCAAGCTAGTGCAAAAGTTATGTCAACAGCAGTACAACT
ATTGGATGTTGTAATAAATGGGATAATTTAA

Upstream 100 bases:

>100_bases
TCACGAAAAAAATGATTAATTTCATAAAACCAGTTGATAAACAAACTACAACTTATAATTCTTATGGAAACATTAGAAAA
TAGATATTGGGAGGAGAAAT

Downstream 100 bases:

>100_bases
TAAAAGGAGGAATTTATAATGAGAGTTAGTACAGGTATGATGTCCAGTAGTTATCTAAATTCATTGCAAGATAATTTGCA
AAGATTAGACAAGGTCAATA

Product: flagellar hook-associated protein

Products: NA

Alternate protein names: HAP1 [H]

Number of amino acids: Translated: 436; Mature: 435

Protein sequence:

>436_residues
MAGLFSILNTANSGMNAHQKSIQTISHNISNLDTDGYSRQRTEFATNSPMYMPSLSNSIGRGQLGTGVHVTDVTRARNSF
YDYQFRAEAHKYGNTVSKYDYYNTIETILNEPSDYGISAGIDDFFKGWESLSKDINSDNKKSLVVENASNLATLISESYK
KLDKLKGDIDSNIDTEIKQINDMLKSLEDLNKSIDIISGSGSTPNDLLDERDRILDNLSFKLDLENSDVKNMLSDGKLEL
NELKNADGTWKTGISGTLQGLFEMHGKIDTYKSDLKDVSDGLAKQINDVYNSSAGITVRDFFITSNVAGEDIIKVNPAIK
SNSNELKLTTEEASKIAKLKDEKIDIGVAGGKVSTISDHYKAFAESVGLDSQKVNQDEVNQRKIINNVDNSRMSVSGVSL
DEEMTELMKVQRSYQASAKVMSTAVQLLDVVINGII

Sequences:

>Translated_436_residues
MAGLFSILNTANSGMNAHQKSIQTISHNISNLDTDGYSRQRTEFATNSPMYMPSLSNSIGRGQLGTGVHVTDVTRARNSF
YDYQFRAEAHKYGNTVSKYDYYNTIETILNEPSDYGISAGIDDFFKGWESLSKDINSDNKKSLVVENASNLATLISESYK
KLDKLKGDIDSNIDTEIKQINDMLKSLEDLNKSIDIISGSGSTPNDLLDERDRILDNLSFKLDLENSDVKNMLSDGKLEL
NELKNADGTWKTGISGTLQGLFEMHGKIDTYKSDLKDVSDGLAKQINDVYNSSAGITVRDFFITSNVAGEDIIKVNPAIK
SNSNELKLTTEEASKIAKLKDEKIDIGVAGGKVSTISDHYKAFAESVGLDSQKVNQDEVNQRKIINNVDNSRMSVSGVSL
DEEMTELMKVQRSYQASAKVMSTAVQLLDVVINGII
>Mature_435_residues
AGLFSILNTANSGMNAHQKSIQTISHNISNLDTDGYSRQRTEFATNSPMYMPSLSNSIGRGQLGTGVHVTDVTRARNSFY
DYQFRAEAHKYGNTVSKYDYYNTIETILNEPSDYGISAGIDDFFKGWESLSKDINSDNKKSLVVENASNLATLISESYKK
LDKLKGDIDSNIDTEIKQINDMLKSLEDLNKSIDIISGSGSTPNDLLDERDRILDNLSFKLDLENSDVKNMLSDGKLELN
ELKNADGTWKTGISGTLQGLFEMHGKIDTYKSDLKDVSDGLAKQINDVYNSSAGITVRDFFITSNVAGEDIIKVNPAIKS
NSNELKLTTEEASKIAKLKDEKIDIGVAGGKVSTISDHYKAFAESVGLDSQKVNQDEVNQRKIINNVDNSRMSVSGVSLD
EEMTELMKVQRSYQASAKVMSTAVQLLDVVINGII

Specific function: Unknown

COG id: COG1256

COG function: function code N; Flagellar hook-associated protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787323, Length=216, Percent_Identity=27.3148148148148, Blast_Score=89, Evalue=4e-19,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR002371 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 48048; Mature: 47917

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGLFSILNTANSGMNAHQKSIQTISHNISNLDTDGYSRQRTEFATNSPMYMPSLSNSIG
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCC
RGQLGTGVHVTDVTRARNSFYDYQFRAEAHKYGNTVSKYDYYNTIETILNEPSDYGISAG
CCCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCC
IDDFFKGWESLSKDINSDNKKSLVVENASNLATLISESYKKLDKLKGDIDSNIDTEIKQI
HHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
NDMLKSLEDLNKSIDIISGSGSTPNDLLDERDRILDNLSFKLDLENSDVKNMLSDGKLEL
HHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCEEEEECCCCHHHHHHCCCCEEH
NELKNADGTWKTGISGTLQGLFEMHGKIDTYKSDLKDVSDGLAKQINDVYNSSAGITVRD
HHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
FFITSNVAGEDIIKVNPAIKSNSNELKLTTEEASKIAKLKDEKIDIGVAGGKVSTISDHY
EEEECCCCCCCEEEECCCCCCCCCCEEEEHHHHHHHHHHCCCCEEEEECCCCCCHHHHHH
KAFAESVGLDSQKVNQDEVNQRKIINNVDNSRMSVSGVSLDEEMTELMKVQRSYQASAKV
HHHHHHHCCCHHHCCHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHH
MSTAVQLLDVVINGII
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AGLFSILNTANSGMNAHQKSIQTISHNISNLDTDGYSRQRTEFATNSPMYMPSLSNSIG
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCC
RGQLGTGVHVTDVTRARNSFYDYQFRAEAHKYGNTVSKYDYYNTIETILNEPSDYGISAG
CCCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCC
IDDFFKGWESLSKDINSDNKKSLVVENASNLATLISESYKKLDKLKGDIDSNIDTEIKQI
HHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
NDMLKSLEDLNKSIDIISGSGSTPNDLLDERDRILDNLSFKLDLENSDVKNMLSDGKLEL
HHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCEEEEECCCCHHHHHHCCCCEEH
NELKNADGTWKTGISGTLQGLFEMHGKIDTYKSDLKDVSDGLAKQINDVYNSSAGITVRD
HHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
FFITSNVAGEDIIKVNPAIKSNSNELKLTTEEASKIAKLKDEKIDIGVAGGKVSTISDHY
EEEECCCCCCCEEEECCCCCCCCCCEEEEHHHHHHHHHHCCCCEEEEECCCCCCHHHHHH
KAFAESVGLDSQKVNQDEVNQRKIINNVDNSRMSVSGVSLDEEMTELMKVQRSYQASAKV
HHHHHHHCCCHHHCCHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHH
MSTAVQLLDVVINGII
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 8045879 [H]