| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126697801
Identifier: 126697801
GI number: 126697801
Start: 294876
End: 295292
Strand: Direct
Name: 126697801
Synonym: CD0230
Alternate gene names: NA
Gene position: 294876-295292 (Clockwise)
Preceding gene: 126697800
Following gene: 126697802
Centisome position: 6.87
GC content: 23.26
Gene sequence:
>417_bases ATGATTACAGACTTAAAAGTCATAATATATGAAGAAAAAAAGATAATTAGTAATATGATGGAATTACTAAAAGAACAATT TGATTATATAATTGAAAAAGACTTAGAAAATTTAAATAGGTTGAATCCTAAACTAGAAGATATTAGTAGAGAACTTGCAT CTATAGAAATAAAAAGAAGACAACTTTTAGGGGATGATGTTTCAATAAGTGAGGTTGTTGAAAACAGTAATGATGAATAT TTAAAAGAAATATATATAGACTTAAAGCATATTCTTGCTTTAGCTAAAAATCAACAAGAATCAAATGATTCTCTAATAAA GAAAGAACTTATTTTCACGAAAAAAATGATTAATTTCATAAAACCAGTTGATAAACAAACTACAACTTATAATTCTTATG GAAACATTAGAAAATAG
Upstream 100 bases:
>100_bases AAAATAGAAGAAATAAAAAGTGCATTAGAAAATGGAACTTACAAAATTAAACCAGAAGAAATTGCTAAAAAAATGATAGA GGAGATGCGAGGATAAAGTA
Downstream 100 bases:
>100_bases ATATTGGGAGGAGAAATATGGCAGGATTATTTTCCATTTTAAATACAGCTAATTCAGGAATGAATGCGCACCAAAAATCA ATACAGACAATTTCTCATAA
Product: flagellar biosynthesis protein
Products: NA
Alternate protein names: FlgN Protein; Flagellar Biosynthesis Protein
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MITDLKVIIYEEKKIISNMMELLKEQFDYIIEKDLENLNRLNPKLEDISRELASIEIKRRQLLGDDVSISEVVENSNDEY LKEIYIDLKHILALAKNQQESNDSLIKKELIFTKKMINFIKPVDKQTTTYNSYGNIRK
Sequences:
>Translated_138_residues MITDLKVIIYEEKKIISNMMELLKEQFDYIIEKDLENLNRLNPKLEDISRELASIEIKRRQLLGDDVSISEVVENSNDEY LKEIYIDLKHILALAKNQQESNDSLIKKELIFTKKMINFIKPVDKQTTTYNSYGNIRK >Mature_138_residues MITDLKVIIYEEKKIISNMMELLKEQFDYIIEKDLENLNRLNPKLEDISRELASIEIKRRQLLGDDVSISEVVENSNDEY LKEIYIDLKHILALAKNQQESNDSLIKKELIFTKKMINFIKPVDKQTTTYNSYGNIRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16311; Mature: 16311
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITDLKVIIYEEKKIISNMMELLKEQFDYIIEKDLENLNRLNPKLEDISRELASIEIKRR CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH QLLGDDVSISEVVENSNDEYLKEIYIDLKHILALAKNQQESNDSLIKKELIFTKKMINFI HHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH KPVDKQTTTYNSYGNIRK CCCCCCCCCCCCCCCCCC >Mature Secondary Structure MITDLKVIIYEEKKIISNMMELLKEQFDYIIEKDLENLNRLNPKLEDISRELASIEIKRR CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH QLLGDDVSISEVVENSNDEYLKEIYIDLKHILALAKNQQESNDSLIKKELIFTKKMINFI HHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH KPVDKQTTTYNSYGNIRK CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA