Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126697801

Identifier: 126697801

GI number: 126697801

Start: 294876

End: 295292

Strand: Direct

Name: 126697801

Synonym: CD0230

Alternate gene names: NA

Gene position: 294876-295292 (Clockwise)

Preceding gene: 126697800

Following gene: 126697802

Centisome position: 6.87

GC content: 23.26

Gene sequence:

>417_bases
ATGATTACAGACTTAAAAGTCATAATATATGAAGAAAAAAAGATAATTAGTAATATGATGGAATTACTAAAAGAACAATT
TGATTATATAATTGAAAAAGACTTAGAAAATTTAAATAGGTTGAATCCTAAACTAGAAGATATTAGTAGAGAACTTGCAT
CTATAGAAATAAAAAGAAGACAACTTTTAGGGGATGATGTTTCAATAAGTGAGGTTGTTGAAAACAGTAATGATGAATAT
TTAAAAGAAATATATATAGACTTAAAGCATATTCTTGCTTTAGCTAAAAATCAACAAGAATCAAATGATTCTCTAATAAA
GAAAGAACTTATTTTCACGAAAAAAATGATTAATTTCATAAAACCAGTTGATAAACAAACTACAACTTATAATTCTTATG
GAAACATTAGAAAATAG

Upstream 100 bases:

>100_bases
AAAATAGAAGAAATAAAAAGTGCATTAGAAAATGGAACTTACAAAATTAAACCAGAAGAAATTGCTAAAAAAATGATAGA
GGAGATGCGAGGATAAAGTA

Downstream 100 bases:

>100_bases
ATATTGGGAGGAGAAATATGGCAGGATTATTTTCCATTTTAAATACAGCTAATTCAGGAATGAATGCGCACCAAAAATCA
ATACAGACAATTTCTCATAA

Product: flagellar biosynthesis protein

Products: NA

Alternate protein names: FlgN Protein; Flagellar Biosynthesis Protein

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MITDLKVIIYEEKKIISNMMELLKEQFDYIIEKDLENLNRLNPKLEDISRELASIEIKRRQLLGDDVSISEVVENSNDEY
LKEIYIDLKHILALAKNQQESNDSLIKKELIFTKKMINFIKPVDKQTTTYNSYGNIRK

Sequences:

>Translated_138_residues
MITDLKVIIYEEKKIISNMMELLKEQFDYIIEKDLENLNRLNPKLEDISRELASIEIKRRQLLGDDVSISEVVENSNDEY
LKEIYIDLKHILALAKNQQESNDSLIKKELIFTKKMINFIKPVDKQTTTYNSYGNIRK
>Mature_138_residues
MITDLKVIIYEEKKIISNMMELLKEQFDYIIEKDLENLNRLNPKLEDISRELASIEIKRRQLLGDDVSISEVVENSNDEY
LKEIYIDLKHILALAKNQQESNDSLIKKELIFTKKMINFIKPVDKQTTTYNSYGNIRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16311; Mature: 16311

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITDLKVIIYEEKKIISNMMELLKEQFDYIIEKDLENLNRLNPKLEDISRELASIEIKRR
CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
QLLGDDVSISEVVENSNDEYLKEIYIDLKHILALAKNQQESNDSLIKKELIFTKKMINFI
HHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
KPVDKQTTTYNSYGNIRK
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MITDLKVIIYEEKKIISNMMELLKEQFDYIIEKDLENLNRLNPKLEDISRELASIEIKRR
CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
QLLGDDVSISEVVENSNDEYLKEIYIDLKHILALAKNQQESNDSLIKKELIFTKKMINFI
HHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
KPVDKQTTTYNSYGNIRK
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA