| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is purE [H]
Identifier: 126697789
GI number: 126697789
Start: 281723
End: 282199
Strand: Direct
Name: purE [H]
Synonym: CD0218
Alternate gene names: 126697789
Gene position: 281723-282199 (Clockwise)
Preceding gene: 126697787
Following gene: 126697790
Centisome position: 6.57
GC content: 33.54
Gene sequence:
>477_bases ATGAAAGTAGCAGTAGTTATGGGTTCAAAATCAGATTATCCAAAATTAGAAGAAGGGATAAAACTGCTTGAAAAATATGG AATAGAAGTTGTAGCAAGAGCATTATCAGCTCATAGAACACCAGAACAACTTTCAATATTCCTAAAAGAAATAGAAGATG ATACTGATGTAATAATAGCAGCAGCAGGAAAAGCAGCACACTTACCAGGTGTAATAGCTTCACAAACATTAATTCCTGTA ATAGGATTACCTATTAAATCATCAACTATGGATGGACTAGACTCACTTTTATCAATAGTTCAAATGCCAAAAGGAATCCC AGTTGCAACAGTTACAATAGACTTAGGTTTAAACGCAGCTTTATTGGCATTACAAATAATGACTTTAAAATACCCAAAAT TAAAAGAGGATTTGAAATCATATAGAGAAGAGATGGCACAAAAGGTGTTAGAAGACGACAAGAATTTAAGGGGGTAG
Upstream 100 bases:
>100_bases AATATATGTATATTAATATAAAATTTAAGGTGTATAATTCGTATAATAATACGAATGATTTGTAGTGTAAAATAACTTAT AAACGGAGAGGGGAAGTCTA
Downstream 100 bases:
>100_bases CAGAAATGTTATTATATGAAGGAAAAGCAAAACAAGTATATTCTACAGATAATGAAAATGAATATGTTGTTTATTATAAA GATGATGCAACAGCATTTAA
Product: phosphoribosylaminoimidazole carboxylase catalytic subunit
Products: NA
Alternate protein names: N5-CAIR mutase; 5-(carboxyamino)imidazole ribonucleotide mutase [H]
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MKVAVVMGSKSDYPKLEEGIKLLEKYGIEVVARALSAHRTPEQLSIFLKEIEDDTDVIIAAAGKAAHLPGVIASQTLIPV IGLPIKSSTMDGLDSLLSIVQMPKGIPVATVTIDLGLNAALLALQIMTLKYPKLKEDLKSYREEMAQKVLEDDKNLRG
Sequences:
>Translated_158_residues MKVAVVMGSKSDYPKLEEGIKLLEKYGIEVVARALSAHRTPEQLSIFLKEIEDDTDVIIAAAGKAAHLPGVIASQTLIPV IGLPIKSSTMDGLDSLLSIVQMPKGIPVATVTIDLGLNAALLALQIMTLKYPKLKEDLKSYREEMAQKVLEDDKNLRG >Mature_158_residues MKVAVVMGSKSDYPKLEEGIKLLEKYGIEVVARALSAHRTPEQLSIFLKEIEDDTDVIIAAAGKAAHLPGVIASQTLIPV IGLPIKSSTMDGLDSLLSIVQMPKGIPVATVTIDLGLNAALLALQIMTLKYPKLKEDLKSYREEMAQKVLEDDKNLRG
Specific function: Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) [H]
COG id: COG0041
COG function: function code F; Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AIR carboxylase family [H]
Homologues:
Organism=Escherichia coli, GI1786734, Length=111, Percent_Identity=49.5495495495495, Blast_Score=115, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6324702, Length=126, Percent_Identity=47.6190476190476, Blast_Score=124, Evalue=6e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000031 [H]
Pfam domain/function: PF00731 AIRC [H]
EC number: =5.4.99.18 [H]
Molecular weight: Translated: 17122; Mature: 17122
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVAVVMGSKSDYPKLEEGIKLLEKYGIEVVARALSAHRTPEQLSIFLKEIEDDTDVIIA CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEE AAGKAAHLPGVIASQTLIPVIGLPIKSSTMDGLDSLLSIVQMPKGIPVATVTIDLGLNAA ECCCCHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHH LLALQIMTLKYPKLKEDLKSYREEMAQKVLEDDKNLRG HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKVAVVMGSKSDYPKLEEGIKLLEKYGIEVVARALSAHRTPEQLSIFLKEIEDDTDVIIA CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEE AAGKAAHLPGVIASQTLIPVIGLPIKSSTMDGLDSLLSIVQMPKGIPVATVTIDLGLNAA ECCCCHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHH LLALQIMTLKYPKLKEDLKSYREEMAQKVLEDDKNLRG HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12622808 [H]