| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is agaZ [C]
Identifier: 126697780
GI number: 126697780
Start: 272457
End: 273722
Strand: Direct
Name: agaZ [C]
Synonym: CD0209
Alternate gene names: 126697780
Gene position: 272457-273722 (Clockwise)
Preceding gene: 126697779
Following gene: 126697781
Centisome position: 6.35
GC content: 32.78
Gene sequence:
>1266_bases ATGAAAAAGTTACCAATAAAGACTGTCGTGCAAAGATTACTAAACTTACAAGAAGAGGGGAAAAGTGCAACTCTTTTAGG AATTGGTCCTATGTCACCAAACTTGTTACAAGCAAGTTTTGAACTAGCAAAAGATGATGATTTTCCTTTAATGTTTATCG CAAGTAGAAATCAAGTAGATGCAGATGAACTAGGTGGCGGTTATGTAAATGGTTGGAATCAGGAAACTTTTACAAAAGAT ATTAAGGAGGTTGCCGACAAAGTTGGATTTGATGGTTTATATTATTTATGTAGAGACCATGGTGGGCCATGGCAAAGAGA TAAAGAGAGAAATGACCATTTGCCTGTTGATGAAGCAATGGAGTTAGGAAAAAAATCTTATTTAGCGGACATTGAAGCAG GTTTTGACCTATTGATGATTGACCCTACAAAAGACCCATTTGAAATTGGAAAAGTAATTCCACTAGATGTAGTACTAGAA AGAACTGTAGAATTAATTGAGTATTGTGAAAACGAGAGAAAAAGACTTAATCTACCAGACATAGGTTATGAGGTTGGTAC AGAGGAAACCAATGGAGGTCTGACTTCAACTGAGACGTATGAAACATTTATAACTAGACTAAAGGTTGAACTCGATAATA GAGGTTTGCCAATGCCAACATTTATAGTTGGTCAAACTGGTACTTTAACTAGAAAGACAGAACAAGTAGGAACTTTTAAT TTTAGAAATGCTTATGATTTAGCTCAAATGGCTAAGAAATATGGAGTTGGTTTAAAAGAGCATAATGGCGATTACTTAGA TGATGTAACTTTATTAGAACATATACCATCTCAAATTATTGCTACAAATGTAGCTCCTCAATATGGTACTGAAGAAACTA GGGCATATTTAAAATTAGCAGAAGTTGAGTGTAAATTAGAAAAAGAGGGCTTAGTTGAGAAAACTTCTAATATCAGACAT GTTCTTCTTGTTAATGCAATTGAATGTGGACGTTGGAGAAAATGGGTAGTAGGAGAACAAAAAAATCTAACTACTGAAGA GATATTTAAGGATGAAGTTTTATCTAATGAAATACTAGATATTGCAGGACATTATACATTTAATAATGATGATGTTAAAA AAGAAATAGAAGTGCTTTATGATAATTTAAGTAAGAATAATATTGATGGTCAAAGATTTGTTGTAGACCATATTAAACGT CCTTTGCGTGATTATGCAGAATGCTATAACTTAAAAGGTGTTACTACGAGGATTTTAAATAAATAA
Upstream 100 bases:
>100_bases TTGATTTATTTTACATATAACTCAAAGATGTTTTTAAAGAAATTTTTATTAAAAGCATCTTTGAAAATATCTTAAAAATA GAATAAAAGGAGATATAGTC
Downstream 100 bases:
>100_bases TAGGACTTATAGTGGTGAGTATTGTTATACTAGGTATTTATAGTTATAATTATACTTACCACTATTAAATTTAGGAGGAC TAATATTTTGATTAATTTAA
Product: sugar-phosphate kinase
Products: ADP; D-Tagatose 1,6-Bisphosphate. [C]
Alternate protein names: None
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MKKLPIKTVVQRLLNLQEEGKSATLLGIGPMSPNLLQASFELAKDDDFPLMFIASRNQVDADELGGGYVNGWNQETFTKD IKEVADKVGFDGLYYLCRDHGGPWQRDKERNDHLPVDEAMELGKKSYLADIEAGFDLLMIDPTKDPFEIGKVIPLDVVLE RTVELIEYCENERKRLNLPDIGYEVGTEETNGGLTSTETYETFITRLKVELDNRGLPMPTFIVGQTGTLTRKTEQVGTFN FRNAYDLAQMAKKYGVGLKEHNGDYLDDVTLLEHIPSQIIATNVAPQYGTEETRAYLKLAEVECKLEKEGLVEKTSNIRH VLLVNAIECGRWRKWVVGEQKNLTTEEIFKDEVLSNEILDIAGHYTFNNDDVKKEIEVLYDNLSKNNIDGQRFVVDHIKR PLRDYAECYNLKGVTTRILNK
Sequences:
>Translated_421_residues MKKLPIKTVVQRLLNLQEEGKSATLLGIGPMSPNLLQASFELAKDDDFPLMFIASRNQVDADELGGGYVNGWNQETFTKD IKEVADKVGFDGLYYLCRDHGGPWQRDKERNDHLPVDEAMELGKKSYLADIEAGFDLLMIDPTKDPFEIGKVIPLDVVLE RTVELIEYCENERKRLNLPDIGYEVGTEETNGGLTSTETYETFITRLKVELDNRGLPMPTFIVGQTGTLTRKTEQVGTFN FRNAYDLAQMAKKYGVGLKEHNGDYLDDVTLLEHIPSQIIATNVAPQYGTEETRAYLKLAEVECKLEKEGLVEKTSNIRH VLLVNAIECGRWRKWVVGEQKNLTTEEIFKDEVLSNEILDIAGHYTFNNDDVKKEIEVLYDNLSKNNIDGQRFVVDHIKR PLRDYAECYNLKGVTTRILNK >Mature_421_residues MKKLPIKTVVQRLLNLQEEGKSATLLGIGPMSPNLLQASFELAKDDDFPLMFIASRNQVDADELGGGYVNGWNQETFTKD IKEVADKVGFDGLYYLCRDHGGPWQRDKERNDHLPVDEAMELGKKSYLADIEAGFDLLMIDPTKDPFEIGKVIPLDVVLE RTVELIEYCENERKRLNLPDIGYEVGTEETNGGLTSTETYETFITRLKVELDNRGLPMPTFIVGQTGTLTRKTEQVGTFN FRNAYDLAQMAKKYGVGLKEHNGDYLDDVTLLEHIPSQIIATNVAPQYGTEETRAYLKLAEVECKLEKEGLVEKTSNIRH VLLVNAIECGRWRKWVVGEQKNLTTEEIFKDEVLSNEILDIAGHYTFNNDDVKKEIEVLYDNLSKNNIDGQRFVVDHIKR PLRDYAECYNLKGVTTRILNK
Specific function: N-acetylgalactosamine utilization. [C]
COG id: COG4573
COG function: function code G; Predicted tagatose 6-phosphate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.1.144 [C]
Molecular weight: Translated: 47878; Mature: 47878
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLPIKTVVQRLLNLQEEGKSATLLGIGPMSPNLLQASFELAKDDDFPLMFIASRNQVD CCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCCCCC ADELGGGYVNGWNQETFTKDIKEVADKVGFDGLYYLCRDHGGPWQRDKERNDHLPVDEAM HHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHH ELGKKSYLADIEAGFDLLMIDPTKDPFEIGKVIPLDVVLERTVELIEYCENERKRLNLPD HHCHHHHHHHHHCCCEEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC IGYEVGTEETNGGLTSTETYETFITRLKVELDNRGLPMPTFIVGQTGTLTRKTEQVGTFN CCCCCCCCCCCCCCCCCHHHHHHHHHHEEEECCCCCCCCEEEECCCCCCCCHHHHHCCCC FRNAYDLAQMAKKYGVGLKEHNGDYLDDVTLLEHIPSQIIATNVAPQYGTEETRAYLKLA CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHH EVECKLEKEGLVEKTSNIRHVLLVNAIECGRWRKWVVGEQKNLTTEEIFKDEVLSNEILD HHHHHHHHCCHHHHHCCCEEEEEEEHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHH IAGHYTFNNDDVKKEIEVLYDNLSKNNIDGQRFVVDHIKRPLRDYAECYNLKGVTTRILN HHCCEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC K C >Mature Secondary Structure MKKLPIKTVVQRLLNLQEEGKSATLLGIGPMSPNLLQASFELAKDDDFPLMFIASRNQVD CCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCCCCC ADELGGGYVNGWNQETFTKDIKEVADKVGFDGLYYLCRDHGGPWQRDKERNDHLPVDEAM HHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHH ELGKKSYLADIEAGFDLLMIDPTKDPFEIGKVIPLDVVLERTVELIEYCENERKRLNLPD HHCHHHHHHHHHCCCEEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC IGYEVGTEETNGGLTSTETYETFITRLKVELDNRGLPMPTFIVGQTGTLTRKTEQVGTFN CCCCCCCCCCCCCCCCCHHHHHHHHHHEEEECCCCCCCCEEEECCCCCCCCHHHHHCCCC FRNAYDLAQMAKKYGVGLKEHNGDYLDDVTLLEHIPSQIIATNVAPQYGTEETRAYLKLA CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHH EVECKLEKEGLVEKTSNIRHVLLVNAIECGRWRKWVVGEQKNLTTEEIFKDEVLSNEILD HHHHHHHHCCHHHHHCCCEEEEEEEHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHH IAGHYTFNNDDVKKEIEVLYDNLSKNNIDGQRFVVDHIKRPLRDYAECYNLKGVTTRILN HHCCEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; D-Tagatose 6-Phosphate [C]
Specific reaction: ATP + D-Tagatose 6-Phosphate = ADP + D-Tagatose 1,6-Bisphosphate. [C]
General reaction: Phospho group transfer [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA