| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is cls [H]
Identifier: 126697765
GI number: 126697765
Start: 250260
End: 251750
Strand: Direct
Name: cls [H]
Synonym: CD0192
Alternate gene names: 126697765
Gene position: 250260-251750 (Clockwise)
Preceding gene: 126697764
Following gene: 126697766
Centisome position: 5.83
GC content: 28.17
Gene sequence:
>1491_bases ATGGGAGTAATAGGAACAATATTTCTGTTCTATTTAATTATATCATATCTAGCTGGAGCCATAATTTCTGTGATTATATT ACTTGAAAATAGAGACCCTGCAAAAACAATGTCTTGGCTATTGATGTTTATTATATTTCCAGGTGTAGGTTTAATGATAT ATGCTATTTCAGGTAGAAATATTAGAAAAAGAAAATTATTTAAGACTCAAAAACTAGCTAATAATATAAAAGAAAAGAAA CTATTTGATACATTAGAAAAGATAACGGAAATAGTTGAATTAGAAAAAGAATCTATAAAACAAAATAAGCTTTTAAGAGA TGAAGAGGATGGTAGTTATAGAAAAAGGGTAATAAATATGTTGTTAAAGACTGGTATGTTTCCCTTTACTAAAAATAATA AAGTGGATGTATTTGTAGATGGAAATGAAAAGTTTAAAAGACTTATAGAAGATATAAGAGAAGCTAAAGACCATATTCAT TTAGAGTACTTTATCATCAAAGATAGTGAAATAGGTAGGGTGTTAAAAGAAGAACTTATAAAAAAGGCTAAAGAAGGCAT TAAGATAAGAATTTTATATGATGATGTAGGATGCTGGAGATTTTGGTTTAATAGAAAATTTTTCCGAGAAATGAGGGAAG TAGGTATAGAAATTGCAGCATTTTTACCTACAAAATTTCCTATAATAGGAGGGAAATTAAACTATAGAAATCACAGAAAA ATTGTTGTTATTGATGGAATAATTGGATATACAGGTGGAATAAATATAGGAGATGAATATTTAGGCAAAAATGATAAGTT TGGATATTGGAGAGATACTCATATTAGGATTAAGGGTATTTCTGTATACATGCTTCAAATGACATTTCTGATTGATTGGT ATTATACGACAAAAGAAGTATTAGTGACTAAAAATTATTTCCCAAGTGTAGGGAATGTTGGTGAAAGTATGATACAAGTT GTTGCGAGTGGTCCAGACAGTGACTGGGAAGATATTCATTATGCTTATTTTTCTGCAATATGTCAGGCTAGAAAAAATGT TTATATAGAAACTCCATATTTTATTCCAGATGAAAGTCTACTAAAAGCTATAAAGAGTGCTGCTCTTAGTGGAGTTGATG TGAGAATAATATTTCCTAAAATTGCAGACCACAAGATAGTAAATATAGCATCTTATTCATATTTTGAAGAAATATTAAGA GCAGGTGGTAAAGTTTATTTATATAATAAAGGATTTATACATTCTAAAGTCGTAATAATAGATGATAAAATTGCTTCTGC AGGTACAGCTAATATGGATTTAAGAAGTTTTATGCTTAACTTTGAGGTAAATGCATTTATCTATGATGAAGAAGTTATTA GGGTAATGACAGATGATTTCTTTGAGGATTTAAGTTACTGTGAAGAACTTAATTTGGAGGTATTTAAGAATAGAAATATC ATACAAAAAATCAAAGAATCTGTAGCAAGATTATTTTCACCAATATTATAA
Upstream 100 bases:
>100_bases GAATCGATAAATTTAAAGAAATGTCTGGATTTGCTCAACAGTACTTATTTTACTATGCAAGAGAACTCGGTATAGGAAAA TAAATTAAGGGGGAGAAATT
Downstream 100 bases:
>100_bases AAAATTATTAAAAAAGGTATTGAAAATTATGTGTGATTGGTATATTATAATAATTGTTAGCACTCTATTAGATAGAGTGA TAATAAATAAAAAGTATATA
Product: cardiolipin synthetase
Products: NA
Alternate protein names: CL synthase 2 [H]
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MGVIGTIFLFYLIISYLAGAIISVIILLENRDPAKTMSWLLMFIIFPGVGLMIYAISGRNIRKRKLFKTQKLANNIKEKK LFDTLEKITEIVELEKESIKQNKLLRDEEDGSYRKRVINMLLKTGMFPFTKNNKVDVFVDGNEKFKRLIEDIREAKDHIH LEYFIIKDSEIGRVLKEELIKKAKEGIKIRILYDDVGCWRFWFNRKFFREMREVGIEIAAFLPTKFPIIGGKLNYRNHRK IVVIDGIIGYTGGINIGDEYLGKNDKFGYWRDTHIRIKGISVYMLQMTFLIDWYYTTKEVLVTKNYFPSVGNVGESMIQV VASGPDSDWEDIHYAYFSAICQARKNVYIETPYFIPDESLLKAIKSAALSGVDVRIIFPKIADHKIVNIASYSYFEEILR AGGKVYLYNKGFIHSKVVIIDDKIASAGTANMDLRSFMLNFEVNAFIYDEEVIRVMTDDFFEDLSYCEELNLEVFKNRNI IQKIKESVARLFSPIL
Sequences:
>Translated_496_residues MGVIGTIFLFYLIISYLAGAIISVIILLENRDPAKTMSWLLMFIIFPGVGLMIYAISGRNIRKRKLFKTQKLANNIKEKK LFDTLEKITEIVELEKESIKQNKLLRDEEDGSYRKRVINMLLKTGMFPFTKNNKVDVFVDGNEKFKRLIEDIREAKDHIH LEYFIIKDSEIGRVLKEELIKKAKEGIKIRILYDDVGCWRFWFNRKFFREMREVGIEIAAFLPTKFPIIGGKLNYRNHRK IVVIDGIIGYTGGINIGDEYLGKNDKFGYWRDTHIRIKGISVYMLQMTFLIDWYYTTKEVLVTKNYFPSVGNVGESMIQV VASGPDSDWEDIHYAYFSAICQARKNVYIETPYFIPDESLLKAIKSAALSGVDVRIIFPKIADHKIVNIASYSYFEEILR AGGKVYLYNKGFIHSKVVIIDDKIASAGTANMDLRSFMLNFEVNAFIYDEEVIRVMTDDFFEDLSYCEELNLEVFKNRNI IQKIKESVARLFSPIL >Mature_495_residues GVIGTIFLFYLIISYLAGAIISVIILLENRDPAKTMSWLLMFIIFPGVGLMIYAISGRNIRKRKLFKTQKLANNIKEKKL FDTLEKITEIVELEKESIKQNKLLRDEEDGSYRKRVINMLLKTGMFPFTKNNKVDVFVDGNEKFKRLIEDIREAKDHIHL EYFIIKDSEIGRVLKEELIKKAKEGIKIRILYDDVGCWRFWFNRKFFREMREVGIEIAAFLPTKFPIIGGKLNYRNHRKI VVIDGIIGYTGGINIGDEYLGKNDKFGYWRDTHIRIKGISVYMLQMTFLIDWYYTTKEVLVTKNYFPSVGNVGESMIQVV ASGPDSDWEDIHYAYFSAICQARKNVYIETPYFIPDESLLKAIKSAALSGVDVRIIFPKIADHKIVNIASYSYFEEILRA GGKVYLYNKGFIHSKVVIIDDKIASAGTANMDLRSFMLNFEVNAFIYDEEVIRVMTDDFFEDLSYCEELNLEVFKNRNII QKIKESVARLFSPIL
Specific function: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol [H]
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains [H]
Homologues:
Organism=Escherichia coli, GI1787502, Length=507, Percent_Identity=28.7968441814596, Blast_Score=215, Evalue=6e-57, Organism=Escherichia coli, GI1787007, Length=369, Percent_Identity=26.0162601626016, Blast_Score=125, Evalue=5e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022924 - InterPro: IPR015679 - InterPro: IPR001736 [H]
Pfam domain/function: PF00614 PLDc [H]
EC number: 2.7.8.-
Molecular weight: Translated: 57593; Mature: 57462
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVIGTIFLFYLIISYLAGAIISVIILLENRDPAKTMSWLLMFIIFPGVGLMIYAISGRN CCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCC IRKRKLFKTQKLANNIKEKKLFDTLEKITEIVELEKESIKQNKLLRDEEDGSYRKRVINM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH LLKTGMFPFTKNNKVDVFVDGNEKFKRLIEDIREAKDHIHLEYFIIKDSEIGRVLKEELI HHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCEEEEEEEEECCHHHHHHHHHHH KKAKEGIKIRILYDDVGCWRFWFNRKFFREMREVGIEIAAFLPTKFPIIGGKLNYRNHRK HHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCEECCCCCCE IVVIDGIIGYTGGINIGDEYLGKNDKFGYWRDTHIRIKGISVYMLQMTFLIDWYYTTKEV EEEEECEECCCCCCCCCHHHCCCCCCCCCEECCEEEEEEHHHHHHHHHHHHHHHEECEEE LVTKNYFPSVGNVGESMIQVVASGPDSDWEDIHYAYFSAICQARKNVYIETPYFIPDESL EEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHH LKAIKSAALSGVDVRIIFPKIADHKIVNIASYSYFEEILRAGGKVYLYNKGFIHSKVVII HHHHHHHHCCCCEEEEEECCCCCCEEEEEHHHHHHHHHHHCCCEEEEEECCCEEEEEEEE DDKIASAGTANMDLRSFMLNFEVNAFIYDEEVIRVMTDDFFEDLSYCEELNLEVFKNRNI ECCCCCCCCCCCHHHHHHEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCH IQKIKESVARLFSPIL HHHHHHHHHHHHHCCC >Mature Secondary Structure GVIGTIFLFYLIISYLAGAIISVIILLENRDPAKTMSWLLMFIIFPGVGLMIYAISGRN CHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCC IRKRKLFKTQKLANNIKEKKLFDTLEKITEIVELEKESIKQNKLLRDEEDGSYRKRVINM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH LLKTGMFPFTKNNKVDVFVDGNEKFKRLIEDIREAKDHIHLEYFIIKDSEIGRVLKEELI HHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCEEEEEEEEECCHHHHHHHHHHH KKAKEGIKIRILYDDVGCWRFWFNRKFFREMREVGIEIAAFLPTKFPIIGGKLNYRNHRK HHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCEECCCCCCE IVVIDGIIGYTGGINIGDEYLGKNDKFGYWRDTHIRIKGISVYMLQMTFLIDWYYTTKEV EEEEECEECCCCCCCCCHHHCCCCCCCCCEECCEEEEEEHHHHHHHHHHHHHHHEECEEE LVTKNYFPSVGNVGESMIQVVASGPDSDWEDIHYAYFSAICQARKNVYIETPYFIPDESL EEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHH LKAIKSAALSGVDVRIIFPKIADHKIVNIASYSYFEEILRAGGKVYLYNKGFIHSKVVII HHHHHHHHCCCCEEEEEECCCCCCEEEEEHHHHHHHHHHHCCCEEEEEECCCEEEEEEEE DDKIASAGTANMDLRSFMLNFEVNAFIYDEEVIRVMTDDFFEDLSYCEELNLEVFKNRNI ECCCCCCCCCCCHHHHHHEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCH IQKIKESVARLFSPIL HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9150240; 9384377 [H]