| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126697728
Identifier: 126697728
GI number: 126697728
Start: 206267
End: 207229
Strand: Direct
Name: 126697728
Synonym: CD0156
Alternate gene names: NA
Gene position: 206267-207229 (Clockwise)
Preceding gene: 126697727
Following gene: 126697729
Centisome position: 4.81
GC content: 28.04
Gene sequence:
>963_bases ATGAACAAATCATGGAGCAACTTGATTATTAAGAATAAAGACAGAAAAGTACGTTCAGGGTGGATTATTATAGCTGTTAT GGCTACCTTTTACATACTTCAGTATTATTTAAGCATGATACTTGTGGAAATAATAAGAAAAATCCTGGTTGCTACAGGTG ACATTAATTTAAAAACAAACTATTTTTCAGAATATGCTAATTGGTTAAATGATGTTGGGTTACAGATTGTATTTCAAATT CTAACAGATTCACTTATGATTATTATTCCTATAATTGTATGGAGATTTATTATGAAAAATCCTATTAGTGAAATGGGATT ACATTCTTATAGAATTAAGAAAAAAGAAGGATATGTAGGAATGTTATTAGGAATATTTAATTGTACAGTAATCTTTATTA TAACAATAACAATTGGTGGTGGTCATGTTACTTCATGGGTACCAAAAATTTCACCTTTAACAGTTTCTTGGATACTTGTC TTTATTTTAGTTGCTTTTGCAGAAGAAATTTTAAATCGTGGTTTTTTTATGGCAGTTTTACGAAGATGTAAAAATATTTA TTTTATAATGATTGTTCCATCTGTTATTTTTGGGTTGATTCATATATGGAATCCTGATGTTACTTTTTTGTCTGTAATTA ATATTATAATTATTGGGATTCTTTTTTCATATATGTTTATAAAGTCGTCGAATATATGGATGTGTATAGGTTATCATTTT ACATGGAATGTATTTCAGGGGATTATATATGGTATGCCTGTAAGTGGACTTCAGGTTCCAGGGATTATAACTACACAAAT CACTCATGGTAATCTATTAAATGGAGGGATGTTTGGTATTGAAGGTGGAATTTTGACTACTTTTGTTAATCTACTTAGCT TTATATTTGTATGGTATTACTATAGAGATTCTAAGTATGATTTTGTTAGTGATAAAGTAAATGTGACCAATATCAAGAAT TAG
Upstream 100 bases:
>100_bases ATTGAAGCAGAAGTTTTGTGGTAAAATACTACTATGAAAAAATTTAATAGAATATATTTTAGAAACAACTAAAAATAATA GTTAGGAGGAAGACATCTAT
Downstream 100 bases:
>100_bases TTGATTATAATAAATTTTAATAATATCTTCTAAGCTTAAAGTATTCTGTAGGATTGTTGGAAATTTACAAAAATATAAAA ATAACTTGGATATTCTATTT
Product: membrane-associated CAAX amino terminal protease
Products: NA
Alternate protein names: Metal-Dependent Membrane Protease; CAAX Amino Terminal Protease Family Protein; CAAX Amino Terminal Protease; CAAX Amino Terminal Protease Family; CAAX Amino Protease Family Protein; Protease; Caax Amino Protease Family; Membrane-Associated CAAX Amino Terminal Protease; Transmembrane Protein; Caax Amino Terminal Protease Family; Protease CAAX Amino Terminal Family; CAAX-Like Membrane Endopeptidase
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MNKSWSNLIIKNKDRKVRSGWIIIAVMATFYILQYYLSMILVEIIRKILVATGDINLKTNYFSEYANWLNDVGLQIVFQI LTDSLMIIIPIIVWRFIMKNPISEMGLHSYRIKKKEGYVGMLLGIFNCTVIFIITITIGGGHVTSWVPKISPLTVSWILV FILVAFAEEILNRGFFMAVLRRCKNIYFIMIVPSVIFGLIHIWNPDVTFLSVINIIIIGILFSYMFIKSSNIWMCIGYHF TWNVFQGIIYGMPVSGLQVPGIITTQITHGNLLNGGMFGIEGGILTTFVNLLSFIFVWYYYRDSKYDFVSDKVNVTNIKN
Sequences:
>Translated_320_residues MNKSWSNLIIKNKDRKVRSGWIIIAVMATFYILQYYLSMILVEIIRKILVATGDINLKTNYFSEYANWLNDVGLQIVFQI LTDSLMIIIPIIVWRFIMKNPISEMGLHSYRIKKKEGYVGMLLGIFNCTVIFIITITIGGGHVTSWVPKISPLTVSWILV FILVAFAEEILNRGFFMAVLRRCKNIYFIMIVPSVIFGLIHIWNPDVTFLSVINIIIIGILFSYMFIKSSNIWMCIGYHF TWNVFQGIIYGMPVSGLQVPGIITTQITHGNLLNGGMFGIEGGILTTFVNLLSFIFVWYYYRDSKYDFVSDKVNVTNIKN >Mature_320_residues MNKSWSNLIIKNKDRKVRSGWIIIAVMATFYILQYYLSMILVEIIRKILVATGDINLKTNYFSEYANWLNDVGLQIVFQI LTDSLMIIIPIIVWRFIMKNPISEMGLHSYRIKKKEGYVGMLLGIFNCTVIFIITITIGGGHVTSWVPKISPLTVSWILV FILVAFAEEILNRGFFMAVLRRCKNIYFIMIVPSVIFGLIHIWNPDVTFLSVINIIIIGILFSYMFIKSSNIWMCIGYHF TWNVFQGIIYGMPVSGLQVPGIITTQITHGNLLNGGMFGIEGGILTTFVNLLSFIFVWYYYRDSKYDFVSDKVNVTNIKN
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36773; Mature: 36773
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKSWSNLIIKNKDRKVRSGWIIIAVMATFYILQYYLSMILVEIIRKILVATGDINLKTN CCCCCCCCEEECCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHH YFSEYANWLNDVGLQIVFQILTDSLMIIIPIIVWRFIMKNPISEMGLHSYRIKKKEGYVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHEEEECCCCHHH MLLGIFNCTVIFIITITIGGGHVTSWVPKISPLTVSWILVFILVAFAEEILNRGFFMAVL HHHHHHHHHEEEEEEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHH RRCKNIYFIMIVPSVIFGLIHIWNPDVTFLSVINIIIIGILFSYMFIKSSNIWMCIGYHF HHHCCEEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEH TWNVFQGIIYGMPVSGLQVPGIITTQITHGNLLNGGMFGIEGGILTTFVNLLSFIFVWYY HHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCEECCCHHHHHHHHHHHHHHHHH YRDSKYDFVSDKVNVTNIKN HCCCCCCCCCCCEEECCCCC >Mature Secondary Structure MNKSWSNLIIKNKDRKVRSGWIIIAVMATFYILQYYLSMILVEIIRKILVATGDINLKTN CCCCCCCCEEECCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHH YFSEYANWLNDVGLQIVFQILTDSLMIIIPIIVWRFIMKNPISEMGLHSYRIKKKEGYVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHEEEECCCCHHH MLLGIFNCTVIFIITITIGGGHVTSWVPKISPLTVSWILVFILVAFAEEILNRGFFMAVL HHHHHHHHHEEEEEEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHH RRCKNIYFIMIVPSVIFGLIHIWNPDVTFLSVINIIIIGILFSYMFIKSSNIWMCIGYHF HHHCCEEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEH TWNVFQGIIYGMPVSGLQVPGIITTQITHGNLLNGGMFGIEGGILTTFVNLLSFIFVWYY HHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCEECCCHHHHHHHHHHHHHHHHH YRDSKYDFVSDKVNVTNIKN HCCCCCCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA